RNA–Protein interactions for RNA: ENST00000404125.5

PSME4-202, Transcript of proteasome activator subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSME4, Length 7,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-202ENST00000404125 MT1HL1P0DM35 61 aa6.48□□□□□ -1.37
PSME4-202ENST00000404125 PLECQ15149 4684 aaKnown RBP6.48□□□□□ -1.37
PSME4-202ENST00000404125 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
PSME4-202ENST00000404125 VPS13BQ7Z7G8 4022 aa6.46□□□□□ -1.38
PSME4-202ENST00000404125 KRTAP12-1P59990 96 aa6.45□□□□□ -1.38
PSME4-202ENST00000404125 DNAH3Q8TD57 4116 aa6.43□□□□□ -1.38
PSME4-202ENST00000404125 STARD9Q9P2P6 4700 aa6.4□□□□□ -1.39
PSME4-202ENST00000404125 DNAH2Q9P225 4427 aa6.39□□□□□ -1.39
PSME4-202ENST00000404125 DNAH6Q9C0G6 4158 aa6.34□□□□□ -1.39
PSME4-202ENST00000404125 DNAH11Q96DT5 4516 aa6.32□□□□□ -1.4
PSME4-202ENST00000404125 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
PSME4-202ENST00000404125 VPS13DQ5THJ4 4388 aa6.28□□□□□ -1.4
PSME4-202ENST00000404125 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
PSME4-202ENST00000404125 KRTAP10-4P60372 401 aaPredicted RBP6.24□□□□□ -1.41
PSME4-202ENST00000404125 DNAH8Q96JB1 4490 aa6.23□□□□□ -1.41
PSME4-202ENST00000404125 FAT2Q9NYQ8 4349 aa6.2□□□□□ -1.42
PSME4-202ENST00000404125 DNAH5Q8TE73 4624 aa6.19□□□□□ -1.42
PSME4-202ENST00000404125 LORP23490 312 aaPredicted RBP6.17□□□□□ -1.42
PSME4-202ENST00000404125 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
PSME4-202ENST00000404125 DNAH17Q9UFH2 4485 aa6.16□□□□□ -1.42
PSME4-202ENST00000404125 KRTAP3-2Q9BYR7 98 aa6.14□□□□□ -1.43
PSME4-202ENST00000404125 HECTD4Q9Y4D8 3996 aa6.13□□□□□ -1.43
PSME4-202ENST00000404125 LRP1BQ9NZR2 4599 aa6.13□□□□□ -1.43
PSME4-202ENST00000404125 DNHD1Q96M86 4753 aa6.12□□□□□ -1.43
PSME4-202ENST00000404125 FAT1Q14517 4588 aa6.12□□□□□ -1.43
PSME4-202ENST00000404125 DYNC2H1Q8NCM8 4307 aaKnown RBP6.06□□□□□ -1.44
PSME4-202ENST00000404125 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
PSME4-202ENST00000404125 KRTAP4-1Q9BYQ7 146 aa6.01□□□□□ -1.45
PSME4-202ENST00000404125 PKHD1P08F94 4074 aa6□□□□□ -1.45
PSME4-202ENST00000404125 FAT3Q8TDW7 4589 aa5.95□□□□□ -1.46
PSME4-202ENST00000404125 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
PSME4-202ENST00000404125 SACSQ9NZJ4 4579 aa5.91□□□□□ -1.46
PSME4-202ENST00000404125 LPAP08519 4548 aa5.87□□□□□ -1.47
PSME4-202ENST00000404125 DYNC1H1Q14204 4646 aaKnown RBP5.82□□□□□ -1.48
PSME4-202ENST00000404125 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
PSME4-202ENST00000404125 MYCBP2O75592 4640 aa5.79□□□□□ -1.48
PSME4-202ENST00000404125 LRP1Q07954 4544 aaKnown RBP5.78□□□□□ -1.48
PSME4-202ENST00000404125 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
PSME4-202ENST00000404125 MT1HP80294 61 aa5.77□□□□□ -1.49
PSME4-202ENST00000404125 KRTAP8-1Q8IUC2 63 aa5.75□□□□□ -1.49
PSME4-202ENST00000404125 APOBP04114 4563 aaKnown RBP5.72□□□□□ -1.49
PSME4-202ENST00000404125 HSPG2P98160 4391 aa5.71□□□□□ -1.5
PSME4-202ENST00000404125 RYR1P21817 5038 aa5.67□□□□□ -1.5
PSME4-202ENST00000404125 HYDINQ4G0P3 5121 aa5.64□□□□□ -1.51
PSME4-202ENST00000404125 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
PSME4-202ENST00000404125 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.51
PSME4-202ENST00000404125 MT2AP02795 61 aa5.56□□□□□ -1.52
PSME4-202ENST00000404125 MT1FP04733 61 aa5.56□□□□□ -1.52
PSME4-202ENST00000404125 SPRR2FQ96RM1 72 aa5.51□□□□□ -1.53
PSME4-202ENST00000404125 PKD1P98161 4303 aa5.49□□□□□ -1.53
PSME4-202ENST00000404125 PKHD1L1Q86WI1 4243 aa5.47□□□□□ -1.53
PSME4-202ENST00000404125 INE1O15225 51 aa5.45□□□□□ -1.54
PSME4-202ENST00000404125 TNXBP22105 4242 aa5.44□□□□□ -1.54
PSME4-202ENST00000404125 RYR3Q15413 4870 aa5.4□□□□□ -1.54
PSME4-202ENST00000404125 KRTAP19-5Q3LI72 72 aa5.38□□□□□ -1.55
PSME4-202ENST00000404125 LRP2P98164 4655 aa5.34□□□□□ -1.55
PSME4-202ENST00000404125 KRTAP10-7P60409 375 aaPredicted RBP5.29□□□□□ -1.56
PSME4-202ENST00000404125 SPRR2GQ9BYE4 73 aa5.26□□□□□ -1.57
PSME4-202ENST00000404125 RYR2Q92736 4967 aa5.21□□□□□ -1.57
PSME4-202ENST00000404125 SPRR2EP22531 72 aa5.2□□□□□ -1.58
PSME4-202ENST00000404125 SPRR2BP35325 72 aa5.2□□□□□ -1.58
PSME4-202ENST00000404125 SPRR2AP35326 72 aa5.2□□□□□ -1.58
PSME4-202ENST00000404125 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
PSME4-202ENST00000404125 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
PSME4-202ENST00000404125 KIAA1109Q2LD37 5005 aa5.15□□□□□ -1.59
PSME4-202ENST00000404125 KMT2CQ8NEZ4 4911 aaKnown RBP5.13□□□□□ -1.59
PSME4-202ENST00000404125 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
PSME4-202ENST00000404125 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
PSME4-202ENST00000404125 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
PSME4-202ENST00000404125 FLGP20930 4061 aaPredicted RBP5.04□□□□□ -1.6
PSME4-202ENST00000404125 MT1GP13640 62 aa5.04□□□□□ -1.6
PSME4-202ENST00000404125 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
PSME4-202ENST00000404125 MT1XP80297 61 aa4.98□□□□□ -1.61
PSME4-202ENST00000404125 SPRR2DP22532 72 aa4.97□□□□□ -1.61
PSME4-202ENST00000404125 HERC2O95714 4834 aa4.96□□□□□ -1.62
PSME4-202ENST00000404125 HERC1Q15751 4861 aa4.93□□□□□ -1.62
PSME4-202ENST00000404125 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
PSME4-202ENST00000404125 MT1BP07438 61 aa4.92□□□□□ -1.62
PSME4-202ENST00000404125 KRTAP19-8Q3LI54 63 aa4.9□□□□□ -1.62
PSME4-202ENST00000404125 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.62
PSME4-202ENST00000404125 LCE2BO14633 110 aa4.86□□□□□ -1.63
PSME4-202ENST00000404125 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
PSME4-202ENST00000404125 KRTAP9-3Q9BYQ3 159 aa4.84□□□□□ -1.64
PSME4-202ENST00000404125 BIRC6Q9NR09 4857 aa4.79□□□□□ -1.64
PSME4-202ENST00000404125 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
PSME4-202ENST00000404125 EPPK1P58107 5090 aaKnown RBP4.76□□□□□ -1.65
PSME4-202ENST00000404125 MUC17Q685J3 4493 aa4.73□□□□□ -1.65
PSME4-202ENST00000404125 KRTAP19-2Q3LHN2 52 aa4.71□□□□□ -1.65
PSME4-202ENST00000404125 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.66
PSME4-202ENST00000404125 MT4P47944 62 aa4.69□□□□□ -1.66
PSME4-202ENST00000404125 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
PSME4-202ENST00000404125 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
PSME4-202ENST00000404125 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
PSME4-202ENST00000404125 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.67
PSME4-202ENST00000404125 MUC2Q02817 5179 aa4.61□□□□□ -1.67
PSME4-202ENST00000404125 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.67
PSME4-202ENST00000404125 ABCA13Q86UQ4 5058 aa4.59□□□□□ -1.67
PSME4-202ENST00000404125 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
PSME4-202ENST00000404125 LCE2DQ5TA82 110 aaPredicted RBP4.54□□□□□ -1.68
PSME4-202ENST00000404125 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms