RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
ITSN1-210ENST00000399353 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
ITSN1-210ENST00000399353 DNAH3Q8TD57 4116 aa7.48□□□□□ -1.21
ITSN1-210ENST00000399353 VPS13DQ5THJ4 4388 aa7.45□□□□□ -1.22
ITSN1-210ENST00000399353 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
ITSN1-210ENST00000399353 VPS13BQ7Z7G8 4022 aa7.41□□□□□ -1.22
ITSN1-210ENST00000399353 MYCBP2O75592 4640 aa7.38□□□□□ -1.23
ITSN1-210ENST00000399353 XP32Q5T750 250 aa7.36□□□□□ -1.23
ITSN1-210ENST00000399353 FAT1Q14517 4588 aa7.35□□□□□ -1.23
ITSN1-210ENST00000399353 DNAH5Q8TE73 4624 aa7.31□□□□□ -1.24
ITSN1-210ENST00000399353 PRKDCP78527 4128 aaKnown RBP7.29□□□□□ -1.24
ITSN1-210ENST00000399353 APOBP04114 4563 aaKnown RBP7.15□□□□□ -1.26
ITSN1-210ENST00000399353 DNHD1Q96M86 4753 aa7.13□□□□□ -1.27
ITSN1-210ENST00000399353 FAT2Q9NYQ8 4349 aa7.12□□□□□ -1.27
ITSN1-210ENST00000399353 DYNC1H1Q14204 4646 aaKnown RBP7.12□□□□□ -1.27
ITSN1-210ENST00000399353 DYNC2H1Q8NCM8 4307 aaKnown RBP7.12□□□□□ -1.27
ITSN1-210ENST00000399353 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
ITSN1-210ENST00000399353 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
ITSN1-210ENST00000399353 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
ITSN1-210ENST00000399353 PKHD1P08F94 4074 aa7.04□□□□□ -1.28
ITSN1-210ENST00000399353 HYDINQ4G0P3 5121 aa7.01□□□□□ -1.29
ITSN1-210ENST00000399353 SACSQ9NZJ4 4579 aa7□□□□□ -1.29
ITSN1-210ENST00000399353 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
ITSN1-210ENST00000399353 M0R2T5 61 aa6.95□□□□□ -1.3
ITSN1-210ENST00000399353 FAT3Q8TDW7 4589 aa6.95□□□□□ -1.3
ITSN1-210ENST00000399353 HSPG2P98160 4391 aa6.93□□□□□ -1.3
ITSN1-210ENST00000399353 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
ITSN1-210ENST00000399353 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
ITSN1-210ENST00000399353 TNP1P09430 55 aa6.83□□□□□ -1.32
ITSN1-210ENST00000399353 PKD1P98161 4303 aa6.81□□□□□ -1.32
ITSN1-210ENST00000399353 LRP2P98164 4655 aa6.79□□□□□ -1.32
ITSN1-210ENST00000399353 MT1HL1P0DM35 61 aa6.74□□□□□ -1.33
ITSN1-210ENST00000399353 LPAP08519 4548 aa6.72□□□□□ -1.33
ITSN1-210ENST00000399353 KRTAP21-3Q3LHN1 58 aa6.68□□□□□ -1.34
ITSN1-210ENST00000399353 KMT2CQ8NEZ4 4911 aaKnown RBP6.64□□□□□ -1.35
ITSN1-210ENST00000399353 RYR1P21817 5038 aa6.61□□□□□ -1.35
ITSN1-210ENST00000399353 KIAA1109Q2LD37 5005 aa6.59□□□□□ -1.35
ITSN1-210ENST00000399353 PKHD1L1Q86WI1 4243 aa6.55□□□□□ -1.36
ITSN1-210ENST00000399353 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
ITSN1-210ENST00000399353 PRO2289Q9P1D8 64 aa6.5□□□□□ -1.37
ITSN1-210ENST00000399353 KRTAP17-1Q9BYP8 105 aa6.42□□□□□ -1.38
ITSN1-210ENST00000399353 RYR3Q15413 4870 aa6.4□□□□□ -1.38
ITSN1-210ENST00000399353 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
ITSN1-210ENST00000399353 KRTAP4-1Q9BYQ7 146 aa6.37□□□□□ -1.39
ITSN1-210ENST00000399353 TNXBP22105 4242 aa6.36□□□□□ -1.39
ITSN1-210ENST00000399353 LCE3AQ5TA76 89 aa6.27□□□□□ -1.41
ITSN1-210ENST00000399353 INE1O15225 51 aa6.25□□□□□ -1.41
ITSN1-210ENST00000399353 RYR2Q92736 4967 aa6.24□□□□□ -1.41
ITSN1-210ENST00000399353 MUC2Q02817 5179 aa6.22□□□□□ -1.41
ITSN1-210ENST00000399353 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.41
ITSN1-210ENST00000399353 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
ITSN1-210ENST00000399353 EPPK1P58107 5090 aaKnown RBP6.1□□□□□ -1.43
ITSN1-210ENST00000399353 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
ITSN1-210ENST00000399353 KRTAP12-3P60328 96 aa5.96□□□□□ -1.46
ITSN1-210ENST00000399353 HERC2O95714 4834 aa5.92□□□□□ -1.46
ITSN1-210ENST00000399353 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
ITSN1-210ENST00000399353 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
ITSN1-210ENST00000399353 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
ITSN1-210ENST00000399353 KRTAP19-2Q3LHN2 52 aa5.8□□□□□ -1.48
ITSN1-210ENST00000399353 KRTAP19-1Q8IUB9 90 aa5.78□□□□□ -1.48
ITSN1-210ENST00000399353 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
ITSN1-210ENST00000399353 SPRR2GQ9BYE4 73 aa5.75□□□□□ -1.49
ITSN1-210ENST00000399353 FLGP20930 4061 aaPredicted RBP5.73□□□□□ -1.49
ITSN1-210ENST00000399353 MT1FP04733 61 aa5.72□□□□□ -1.49
ITSN1-210ENST00000399353 HMCN2Q8NDA2 5059 aa5.71□□□□□ -1.5
ITSN1-210ENST00000399353 PCLOQ9Y6V0 5065 aa5.7□□□□□ -1.5
ITSN1-210ENST00000399353 MT2AP02795 61 aa5.7□□□□□ -1.5
ITSN1-210ENST00000399353 MT1HP80294 61 aa5.68□□□□□ -1.5
ITSN1-210ENST00000399353 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
ITSN1-210ENST00000399353 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.52
ITSN1-210ENST00000399353 UBR4Q5T4S7 5183 aa5.54□□□□□ -1.52
ITSN1-210ENST00000399353 HERC1Q15751 4861 aa5.54□□□□□ -1.52
ITSN1-210ENST00000399353 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
ITSN1-210ENST00000399353 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
ITSN1-210ENST00000399353 MT1XP80297 61 aa5.5□□□□□ -1.53
ITSN1-210ENST00000399353 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
ITSN1-210ENST00000399353 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
ITSN1-210ENST00000399353 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
ITSN1-210ENST00000399353 KMT2DO14686 5537 aa5.44□□□□□ -1.54
ITSN1-210ENST00000399353 MT1BP07438 61 aa5.41□□□□□ -1.54
ITSN1-210ENST00000399353 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
ITSN1-210ENST00000399353 KRTAP19-8Q3LI54 63 aa5.36□□□□□ -1.55
ITSN1-210ENST00000399353 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
ITSN1-210ENST00000399353 BIRC6Q9NR09 4857 aa5.35□□□□□ -1.55
ITSN1-210ENST00000399353 FSIP2Q5CZC0 6907 aa5.35□□□□□ -1.55
ITSN1-210ENST00000399353 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
ITSN1-210ENST00000399353 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
ITSN1-210ENST00000399353 USH2AO75445 5202 aa5.28□□□□□ -1.56
ITSN1-210ENST00000399353 KRTAP9-6A8MVA2 160 aa5.26□□□□□ -1.57
ITSN1-210ENST00000399353 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
ITSN1-210ENST00000399353 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
ITSN1-210ENST00000399353 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.58
ITSN1-210ENST00000399353 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
ITSN1-210ENST00000399353 FCGBPQ9Y6R7 5405 aaPredicted RBP5.06□□□□□ -1.6
ITSN1-210ENST00000399353 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
ITSN1-210ENST00000399353 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
ITSN1-210ENST00000399353 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
ITSN1-210ENST00000399353 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
ITSN1-210ENST00000399353 LCE2BO14633 110 aa5.02□□□□□ -1.61
ITSN1-210ENST00000399353 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms