RNA–Protein interactions for RNA: ENST00000395965.7

FAM172A-201, Transcript of family with sequence similarity 172 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM172A, Length 4,312 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM172A-201ENST00000395965 LRP1BQ9NZR2 4599 aa5.56□□□□□ -1.52
FAM172A-201ENST00000395965 Q6ZRN7 208 aaPredicted RBP5.55□□□□□ -1.52
FAM172A-201ENST00000395965 VPS13BQ7Z7G8 4022 aa5.54□□□□□ -1.52
FAM172A-201ENST00000395965 Q5VSD8 79 aa5.53□□□□□ -1.52
FAM172A-201ENST00000395965 KRTAP13-2Q52LG2 175 aa5.51□□□□□ -1.53
FAM172A-201ENST00000395965 PKD1P98161 4303 aa5.47□□□□□ -1.53
FAM172A-201ENST00000395965 TPRXLQ17RH7 258 aa5.44□□□□□ -1.54
FAM172A-201ENST00000395965 HYDINQ4G0P3 5121 aa5.43□□□□□ -1.54
FAM172A-201ENST00000395965 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
FAM172A-201ENST00000395965 HSPG2P98160 4391 aa5.29□□□□□ -1.56
FAM172A-201ENST00000395965 LPAP08519 4548 aa5.28□□□□□ -1.56
FAM172A-201ENST00000395965 SACSQ9NZJ4 4579 aa5.26□□□□□ -1.57
FAM172A-201ENST00000395965 INE1O15225 51 aa5.26□□□□□ -1.57
FAM172A-201ENST00000395965 MYCBP2O75592 4640 aa5.25□□□□□ -1.57
FAM172A-201ENST00000395965 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
FAM172A-201ENST00000395965 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
FAM172A-201ENST00000395965 KRTAP1-4P0C5Y4 121 aa5.24□□□□□ -1.57
FAM172A-201ENST00000395965 APOBP04114 4563 aaKnown RBP5.22□□□□□ -1.57
FAM172A-201ENST00000395965 PKHD1L1Q86WI1 4243 aa5.2□□□□□ -1.58
FAM172A-201ENST00000395965 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
FAM172A-201ENST00000395965 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
FAM172A-201ENST00000395965 KRTAP3-1Q9BYR8 98 aa5.15□□□□□ -1.58
FAM172A-201ENST00000395965 XP32Q5T750 250 aa5.14□□□□□ -1.59
FAM172A-201ENST00000395965 FAT1Q14517 4588 aa5.13□□□□□ -1.59
FAM172A-201ENST00000395965 DYNC1H1Q14204 4646 aaKnown RBP5.13□□□□□ -1.59
FAM172A-201ENST00000395965 DNHD1Q96M86 4753 aa5.1□□□□□ -1.59
FAM172A-201ENST00000395965 TNXBP22105 4242 aa5.06□□□□□ -1.6
FAM172A-201ENST00000395965 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
FAM172A-201ENST00000395965 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
FAM172A-201ENST00000395965 FAT3Q8TDW7 4589 aa4.98□□□□□ -1.61
FAM172A-201ENST00000395965 KMT2CQ8NEZ4 4911 aaKnown RBP4.94□□□□□ -1.62
FAM172A-201ENST00000395965 A0A1B0GVY2 172 aa4.93□□□□□ -1.62
FAM172A-201ENST00000395965 KRTAP21-3Q3LHN1 58 aa4.89□□□□□ -1.63
FAM172A-201ENST00000395965 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
FAM172A-201ENST00000395965 KRTAP3-2Q9BYR7 98 aa4.89□□□□□ -1.63
FAM172A-201ENST00000395965 RYR1P21817 5038 aa4.88□□□□□ -1.63
FAM172A-201ENST00000395965 KRTAP10-10P60014 251 aa4.84□□□□□ -1.63
FAM172A-201ENST00000395965 LRP2P98164 4655 aa4.83□□□□□ -1.64
FAM172A-201ENST00000395965 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
FAM172A-201ENST00000395965 ABCA13Q86UQ4 5058 aa4.73□□□□□ -1.65
FAM172A-201ENST00000395965 MUC2Q02817 5179 aa4.65□□□□□ -1.67
FAM172A-201ENST00000395965 MUC17Q685J3 4493 aa4.57□□□□□ -1.68
FAM172A-201ENST00000395965 RYR2Q92736 4967 aa4.53□□□□□ -1.68
FAM172A-201ENST00000395965 KRTAP10-4P60372 401 aaPredicted RBP4.52□□□□□ -1.69
FAM172A-201ENST00000395965 PCLOQ9Y6V0 5065 aa4.51□□□□□ -1.69
FAM172A-201ENST00000395965 RYR3Q15413 4870 aa4.49□□□□□ -1.69
FAM172A-201ENST00000395965 EPPK1P58107 5090 aaKnown RBP4.47□□□□□ -1.69
FAM172A-201ENST00000395965 LORP23490 312 aaPredicted RBP4.46□□□□□ -1.69
FAM172A-201ENST00000395965 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
FAM172A-201ENST00000395965 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
FAM172A-201ENST00000395965 KRTAP17-1Q9BYP8 105 aa4.4□□□□□ -1.7
FAM172A-201ENST00000395965 FLGP20930 4061 aaPredicted RBP4.38□□□□□ -1.71
FAM172A-201ENST00000395965 KIAA1109Q2LD37 5005 aa4.38□□□□□ -1.71
FAM172A-201ENST00000395965 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
FAM172A-201ENST00000395965 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
FAM172A-201ENST00000395965 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
FAM172A-201ENST00000395965 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
FAM172A-201ENST00000395965 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
FAM172A-201ENST00000395965 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
FAM172A-201ENST00000395965 HMCN2Q8NDA2 5059 aa4.21□□□□□ -1.74
FAM172A-201ENST00000395965 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
FAM172A-201ENST00000395965 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
FAM172A-201ENST00000395965 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.75
FAM172A-201ENST00000395965 RNF213Q63HN8 5207 aa4.08□□□□□ -1.76
FAM172A-201ENST00000395965 KRTAP4-5Q9BYR2 181 aa4.04□□□□□ -1.76
FAM172A-201ENST00000395965 HERC1Q15751 4861 aa4.02□□□□□ -1.77
FAM172A-201ENST00000395965 LCE2DQ5TA82 110 aaPredicted RBP3.99□□□□□ -1.77
FAM172A-201ENST00000395965 KMT2DO14686 5537 aa3.98□□□□□ -1.77
FAM172A-201ENST00000395965 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
FAM172A-201ENST00000395965 BIRC6Q9NR09 4857 aa3.97□□□□□ -1.77
FAM172A-201ENST00000395965 HERC2O95714 4834 aa3.93□□□□□ -1.78
FAM172A-201ENST00000395965 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
FAM172A-201ENST00000395965 SPRR2GQ9BYE4 73 aa3.87□□□□□ -1.79
FAM172A-201ENST00000395965 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
FAM172A-201ENST00000395965 USH2AO75445 5202 aa3.82□□□□□ -1.8
FAM172A-201ENST00000395965 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
FAM172A-201ENST00000395965 MT2AP02795 61 aa3.78□□□□□ -1.8
FAM172A-201ENST00000395965 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
FAM172A-201ENST00000395965 MT1HP80294 61 aa3.74□□□□□ -1.81
FAM172A-201ENST00000395965 LCE2CQ5TA81 110 aa3.74□□□□□ -1.81
FAM172A-201ENST00000395965 KRTAP19-1Q8IUB9 90 aa3.73□□□□□ -1.81
FAM172A-201ENST00000395965 MT1FP04733 61 aa3.69□□□□□ -1.82
FAM172A-201ENST00000395965 LCE2BO14633 110 aa3.64□□□□□ -1.83
FAM172A-201ENST00000395965 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
FAM172A-201ENST00000395965 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
FAM172A-201ENST00000395965 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
FAM172A-201ENST00000395965 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
FAM172A-201ENST00000395965 MT1XP80297 61 aa3.53□□□□□ -1.84
FAM172A-201ENST00000395965 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
FAM172A-201ENST00000395965 LCE3BQ5TA77 95 aa3.51□□□□□ -1.85
FAM172A-201ENST00000395965 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
FAM172A-201ENST00000395965 LCE2AQ5TA79 106 aaPredicted RBP3.51□□□□□ -1.85
FAM172A-201ENST00000395965 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
FAM172A-201ENST00000395965 MT1BP07438 61 aa3.45□□□□□ -1.86
FAM172A-201ENST00000395965 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
FAM172A-201ENST00000395965 KRTAP9-8Q9BYQ0 159 aa3.4□□□□□ -1.87
FAM172A-201ENST00000395965 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
FAM172A-201ENST00000395965 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
FAM172A-201ENST00000395965 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.87
FAM172A-201ENST00000395965 MT1GP13640 62 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms