RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 APOBP04114 4563 aaKnown RBP7.65□□□□□ -1.19
SREBF1-205ENST00000395757 FAT3Q8TDW7 4589 aa7.64□□□□□ -1.19
SREBF1-205ENST00000395757 COX6B2Q6YFQ2 88 aa7.63□□□□□ -1.19
SREBF1-205ENST00000395757 KIAA1109Q2LD37 5005 aa7.62□□□□□ -1.19
SREBF1-205ENST00000395757 RPS29P62273 56 aaKnown RBP7.62□□□□□ -1.19
SREBF1-205ENST00000395757 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
SREBF1-205ENST00000395757 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
SREBF1-205ENST00000395757 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
SREBF1-205ENST00000395757 J3QL48 77 aa7.54□□□□□ -1.2
SREBF1-205ENST00000395757 H0YAA0 97 aa7.53□□□□□ -1.2
SREBF1-205ENST00000395757 XP32Q5T750 250 aa7.53□□□□□ -1.2
SREBF1-205ENST00000395757 S4R3F8 94 aa7.53□□□□□ -1.2
SREBF1-205ENST00000395757 KRTAP10-8P60410 259 aa7.5□□□□□ -1.21
SREBF1-205ENST00000395757 RYR1P21817 5038 aa7.5□□□□□ -1.21
SREBF1-205ENST00000395757 RYR3Q15413 4870 aa7.49□□□□□ -1.21
SREBF1-205ENST00000395757 RPL37P61927 97 aaKnown RBP7.48□□□□□ -1.21
SREBF1-205ENST00000395757 RYR2Q92736 4967 aa7.46□□□□□ -1.22
SREBF1-205ENST00000395757 SEC61BP60468 96 aaKnown RBP7.45□□□□□ -1.22
SREBF1-205ENST00000395757 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
SREBF1-205ENST00000395757 KRTAP17-1Q9BYP8 105 aa7.4□□□□□ -1.22
SREBF1-205ENST00000395757 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
SREBF1-205ENST00000395757 HSPG2P98160 4391 aa7.32□□□□□ -1.24
SREBF1-205ENST00000395757 LRP2P98164 4655 aa7.3□□□□□ -1.24
SREBF1-205ENST00000395757 MT1HL1P0DM35 61 aa7.29□□□□□ -1.24
SREBF1-205ENST00000395757 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
SREBF1-205ENST00000395757 KRTAP13-4Q3LI77 160 aa7.25□□□□□ -1.25
SREBF1-205ENST00000395757 PKHD1L1Q86WI1 4243 aa7.25□□□□□ -1.25
SREBF1-205ENST00000395757 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
SREBF1-205ENST00000395757 M0QZ58 72 aa7.22□□□□□ -1.25
SREBF1-205ENST00000395757 KRTAP3-3Q9BYR6 98 aa7.2□□□□□ -1.26
SREBF1-205ENST00000395757 LPAP08519 4548 aa7.2□□□□□ -1.26
SREBF1-205ENST00000395757 EPPK1P58107 5090 aaKnown RBP7.2□□□□□ -1.26
SREBF1-205ENST00000395757 R4GN34 69 aa7.2□□□□□ -1.26
SREBF1-205ENST00000395757 KRTAP10-6P60371 365 aaPredicted RBP7.18□□□□□ -1.26
SREBF1-205ENST00000395757 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
SREBF1-205ENST00000395757 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
SREBF1-205ENST00000395757 TNXBP22105 4242 aa7.06□□□□□ -1.28
SREBF1-205ENST00000395757 ABCA13Q86UQ4 5058 aa7.05□□□□□ -1.28
SREBF1-205ENST00000395757 CAMK2N1Q7Z7J9 78 aa7□□□□□ -1.29
SREBF1-205ENST00000395757 M0R2T5 61 aa6.96□□□□□ -1.29
SREBF1-205ENST00000395757 HERC2O95714 4834 aa6.96□□□□□ -1.3
SREBF1-205ENST00000395757 MUC2Q02817 5179 aa6.94□□□□□ -1.3
SREBF1-205ENST00000395757 KRTAP12-1P59990 96 aa6.92□□□□□ -1.3
SREBF1-205ENST00000395757 KRTAP4-1Q9BYQ7 146 aa6.87□□□□□ -1.31
SREBF1-205ENST00000395757 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
SREBF1-205ENST00000395757 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
SREBF1-205ENST00000395757 HERC1Q15751 4861 aa6.72□□□□□ -1.33
SREBF1-205ENST00000395757 RNF213Q63HN8 5207 aa6.64□□□□□ -1.35
SREBF1-205ENST00000395757 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
SREBF1-205ENST00000395757 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
SREBF1-205ENST00000395757 PCLOQ9Y6V0 5065 aa6.49□□□□□ -1.37
SREBF1-205ENST00000395757 BIRC6Q9NR09 4857 aa6.46□□□□□ -1.38
SREBF1-205ENST00000395757 UBR4Q5T4S7 5183 aa6.44□□□□□ -1.38
SREBF1-205ENST00000395757 TNP1P09430 55 aa6.41□□□□□ -1.38
SREBF1-205ENST00000395757 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
SREBF1-205ENST00000395757 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
SREBF1-205ENST00000395757 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
SREBF1-205ENST00000395757 HMCN2Q8NDA2 5059 aa6.24□□□□□ -1.41
SREBF1-205ENST00000395757 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
SREBF1-205ENST00000395757 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
SREBF1-205ENST00000395757 MT1HP80294 61 aa6.14□□□□□ -1.43
SREBF1-205ENST00000395757 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
SREBF1-205ENST00000395757 MT1FP04733 61 aa6.1□□□□□ -1.43
SREBF1-205ENST00000395757 MT2AP02795 61 aa6.06□□□□□ -1.44
SREBF1-205ENST00000395757 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
SREBF1-205ENST00000395757 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.44
SREBF1-205ENST00000395757 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
SREBF1-205ENST00000395757 INE1O15225 51 aa5.95□□□□□ -1.46
SREBF1-205ENST00000395757 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
SREBF1-205ENST00000395757 USH2AO75445 5202 aa5.94□□□□□ -1.46
SREBF1-205ENST00000395757 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
SREBF1-205ENST00000395757 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
SREBF1-205ENST00000395757 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
SREBF1-205ENST00000395757 KMT2DO14686 5537 aa5.76□□□□□ -1.49
SREBF1-205ENST00000395757 MT1BP07438 61 aa5.73□□□□□ -1.49
SREBF1-205ENST00000395757 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
SREBF1-205ENST00000395757 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
SREBF1-205ENST00000395757 MT1XP80297 61 aa5.69□□□□□ -1.5
SREBF1-205ENST00000395757 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
SREBF1-205ENST00000395757 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
SREBF1-205ENST00000395757 KRTAP9-3Q9BYQ3 159 aa5.61□□□□□ -1.51
SREBF1-205ENST00000395757 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
SREBF1-205ENST00000395757 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
SREBF1-205ENST00000395757 LCE2BO14633 110 aa5.54□□□□□ -1.52
SREBF1-205ENST00000395757 SPRR5A0A1B0GTR4 108 aa5.53□□□□□ -1.52
SREBF1-205ENST00000395757 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
SREBF1-205ENST00000395757 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
SREBF1-205ENST00000395757 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
SREBF1-205ENST00000395757 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
SREBF1-205ENST00000395757 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.56
SREBF1-205ENST00000395757 OBSCNQ5VST9 7968 aa5.27□□□□□ -1.57
SREBF1-205ENST00000395757 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
SREBF1-205ENST00000395757 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
SREBF1-205ENST00000395757 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.57
SREBF1-205ENST00000395757 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
SREBF1-205ENST00000395757 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
SREBF1-205ENST00000395757 SSPOA2VEC9 5147 aa5.16□□□□□ -1.58
SREBF1-205ENST00000395757 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
SREBF1-205ENST00000395757 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
SREBF1-205ENST00000395757 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms