RNA–Protein interactions for RNA: ENST00000395310.6

SEC31A-205, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SEC31A, Length 4,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-205ENST00000395310 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
SEC31A-205ENST00000395310 DNAH3Q8TD57 4116 aa6.54□□□□□ -1.36
SEC31A-205ENST00000395310 FAT1Q14517 4588 aa6.52□□□□□ -1.37
SEC31A-205ENST00000395310 A0A1B0GVY2 172 aa6.52□□□□□ -1.37
SEC31A-205ENST00000395310 DNHD1Q96M86 4753 aa6.5□□□□□ -1.37
SEC31A-205ENST00000395310 DNAH6Q9C0G6 4158 aa6.49□□□□□ -1.37
SEC31A-205ENST00000395310 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
SEC31A-205ENST00000395310 ALMS1Q8TCU4 4167 aa6.49□□□□□ -1.37
SEC31A-205ENST00000395310 KRTAP3-3Q9BYR6 98 aa6.48□□□□□ -1.37
SEC31A-205ENST00000395310 HECTD4Q9Y4D8 3996 aa6.47□□□□□ -1.37
SEC31A-205ENST00000395310 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
SEC31A-205ENST00000395310 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
SEC31A-205ENST00000395310 M0R2T5 61 aa6.45□□□□□ -1.38
SEC31A-205ENST00000395310 VPS13BQ7Z7G8 4022 aa6.43□□□□□ -1.38
SEC31A-205ENST00000395310 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
SEC31A-205ENST00000395310 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
SEC31A-205ENST00000395310 DYNC1H1Q14204 4646 aaKnown RBP6.32□□□□□ -1.4
SEC31A-205ENST00000395310 DYNC2H1Q8NCM8 4307 aaKnown RBP6.32□□□□□ -1.4
SEC31A-205ENST00000395310 TNP1P09430 55 aa6.25□□□□□ -1.41
SEC31A-205ENST00000395310 HYDINQ4G0P3 5121 aa6.22□□□□□ -1.41
SEC31A-205ENST00000395310 KRTAP21-3Q3LHN1 58 aa6.21□□□□□ -1.41
SEC31A-205ENST00000395310 SACSQ9NZJ4 4579 aa6.2□□□□□ -1.42
SEC31A-205ENST00000395310 LRP1Q07954 4544 aaKnown RBP6.17□□□□□ -1.42
SEC31A-205ENST00000395310 MT1HL1P0DM35 61 aa6.16□□□□□ -1.42
SEC31A-205ENST00000395310 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
SEC31A-205ENST00000395310 PKHD1P08F94 4074 aa6.16□□□□□ -1.42
SEC31A-205ENST00000395310 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.42
SEC31A-205ENST00000395310 FAT3Q8TDW7 4589 aa6.1□□□□□ -1.43
SEC31A-205ENST00000395310 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
SEC31A-205ENST00000395310 FAT2Q9NYQ8 4349 aa6.06□□□□□ -1.44
SEC31A-205ENST00000395310 RYR1P21817 5038 aa6.01□□□□□ -1.45
SEC31A-205ENST00000395310 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
SEC31A-205ENST00000395310 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
SEC31A-205ENST00000395310 PKD1P98161 4303 aa5.94□□□□□ -1.46
SEC31A-205ENST00000395310 LRP2P98164 4655 aa5.9□□□□□ -1.46
SEC31A-205ENST00000395310 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
SEC31A-205ENST00000395310 HSPG2P98160 4391 aa5.86□□□□□ -1.47
SEC31A-205ENST00000395310 RYR3Q15413 4870 aa5.84□□□□□ -1.47
SEC31A-205ENST00000395310 KRTAP17-1Q9BYP8 105 aa5.82□□□□□ -1.48
SEC31A-205ENST00000395310 KMT2CQ8NEZ4 4911 aaKnown RBP5.8□□□□□ -1.48
SEC31A-205ENST00000395310 KRTAP4-1Q9BYQ7 146 aa5.79□□□□□ -1.48
SEC31A-205ENST00000395310 RYR2Q92736 4967 aa5.72□□□□□ -1.49
SEC31A-205ENST00000395310 LPAP08519 4548 aa5.7□□□□□ -1.5
SEC31A-205ENST00000395310 PKHD1L1Q86WI1 4243 aa5.67□□□□□ -1.5
SEC31A-205ENST00000395310 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
SEC31A-205ENST00000395310 TNXBP22105 4242 aa5.57□□□□□ -1.52
SEC31A-205ENST00000395310 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
SEC31A-205ENST00000395310 HERC2O95714 4834 aa5.42□□□□□ -1.54
SEC31A-205ENST00000395310 INE1O15225 51 aa5.41□□□□□ -1.54
SEC31A-205ENST00000395310 EPPK1P58107 5090 aaKnown RBP5.41□□□□□ -1.54
SEC31A-205ENST00000395310 ABCA13Q86UQ4 5058 aa5.39□□□□□ -1.55
SEC31A-205ENST00000395310 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
SEC31A-205ENST00000395310 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
SEC31A-205ENST00000395310 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
SEC31A-205ENST00000395310 MUC2Q02817 5179 aa5.34□□□□□ -1.55
SEC31A-205ENST00000395310 SPRR2GQ9BYE4 73 aa5.25□□□□□ -1.57
SEC31A-205ENST00000395310 MT1FP04733 61 aa5.22□□□□□ -1.57
SEC31A-205ENST00000395310 MT2AP02795 61 aa5.22□□□□□ -1.57
SEC31A-205ENST00000395310 MT1HP80294 61 aa5.22□□□□□ -1.57
SEC31A-205ENST00000395310 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
SEC31A-205ENST00000395310 MUC17Q685J3 4493 aa5.16□□□□□ -1.58
SEC31A-205ENST00000395310 KRTAP19-2Q3LHN2 52 aa5.15□□□□□ -1.58
SEC31A-205ENST00000395310 FAT4Q6V0I7 4981 aa5.14□□□□□ -1.59
SEC31A-205ENST00000395310 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.59
SEC31A-205ENST00000395310 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.6
SEC31A-205ENST00000395310 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
SEC31A-205ENST00000395310 RNF213Q63HN8 5207 aa5.05□□□□□ -1.6
SEC31A-205ENST00000395310 HERC1Q15751 4861 aa5.04□□□□□ -1.6
SEC31A-205ENST00000395310 LCE2CQ5TA81 110 aa5.03□□□□□ -1.6
SEC31A-205ENST00000395310 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
SEC31A-205ENST00000395310 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
SEC31A-205ENST00000395310 PCLOQ9Y6V0 5065 aa4.98□□□□□ -1.61
SEC31A-205ENST00000395310 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
SEC31A-205ENST00000395310 MT1XP80297 61 aa4.96□□□□□ -1.61
SEC31A-205ENST00000395310 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
SEC31A-205ENST00000395310 UBR4Q5T4S7 5183 aa4.93□□□□□ -1.62
SEC31A-205ENST00000395310 MT1BP07438 61 aa4.92□□□□□ -1.62
SEC31A-205ENST00000395310 KRTAP9-8Q9BYQ0 159 aa4.92□□□□□ -1.62
SEC31A-205ENST00000395310 BIRC6Q9NR09 4857 aa4.91□□□□□ -1.62
SEC31A-205ENST00000395310 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.62
SEC31A-205ENST00000395310 KRTAP19-8Q3LI54 63 aa4.9□□□□□ -1.63
SEC31A-205ENST00000395310 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
SEC31A-205ENST00000395310 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
SEC31A-205ENST00000395310 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
SEC31A-205ENST00000395310 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
SEC31A-205ENST00000395310 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
SEC31A-205ENST00000395310 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
SEC31A-205ENST00000395310 KMT2DO14686 5537 aa4.6□□□□□ -1.67
SEC31A-205ENST00000395310 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
SEC31A-205ENST00000395310 USH2AO75445 5202 aa4.58□□□□□ -1.68
SEC31A-205ENST00000395310 LCE2BO14633 110 aa4.58□□□□□ -1.68
SEC31A-205ENST00000395310 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
SEC31A-205ENST00000395310 MT1GP13640 62 aa4.46□□□□□ -1.69
SEC31A-205ENST00000395310 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
SEC31A-205ENST00000395310 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.7
SEC31A-205ENST00000395310 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
SEC31A-205ENST00000395310 MT1LQ93083 61 aa4.37□□□□□ -1.71
SEC31A-205ENST00000395310 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
SEC31A-205ENST00000395310 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
SEC31A-205ENST00000395310 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms