RNA–Protein interactions for RNA: ENST00000395146.8

AFF1-202, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AFF1, Length 9,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-202ENST00000395146 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
AFF1-202ENST00000395146 DNAH5Q8TE73 4624 aa4.44□□□□□ -1.7
AFF1-202ENST00000395146 AKAP9Q99996 3911 aa4.41□□□□□ -1.7
AFF1-202ENST00000395146 DNAH9Q9NYC9 4486 aa4.4□□□□□ -1.7
AFF1-202ENST00000395146 DNAH1Q9P2D7 4330 aa4.37□□□□□ -1.71
AFF1-202ENST00000395146 DNAH11Q96DT5 4516 aa4.36□□□□□ -1.71
AFF1-202ENST00000395146 DNAH2Q9P225 4427 aa4.36□□□□□ -1.71
AFF1-202ENST00000395146 DNAH10Q8IVF4 4471 aa4.36□□□□□ -1.71
AFF1-202ENST00000395146 KRTAP4-1Q9BYQ7 146 aa4.31□□□□□ -1.72
AFF1-202ENST00000395146 PLECQ15149 4684 aaKnown RBP4.3□□□□□ -1.72
AFF1-202ENST00000395146 CSMD3Q7Z407 3707 aa4.3□□□□□ -1.72
AFF1-202ENST00000395146 DNAH17Q9UFH2 4485 aa4.3□□□□□ -1.72
AFF1-202ENST00000395146 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
AFF1-202ENST00000395146 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
AFF1-202ENST00000395146 VPS13DQ5THJ4 4388 aa4.26□□□□□ -1.73
AFF1-202ENST00000395146 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
AFF1-202ENST00000395146 MT1HP80294 61 aa4.24□□□□□ -1.73
AFF1-202ENST00000395146 DNAH3Q8TD57 4116 aa4.23□□□□□ -1.73
AFF1-202ENST00000395146 MT2AP02795 61 aa4.22□□□□□ -1.73
AFF1-202ENST00000395146 ZNF469Q96JG9 3925 aaPredicted RBP4.18□□□□□ -1.74
AFF1-202ENST00000395146 DYNC1H1Q14204 4646 aaKnown RBP4.18□□□□□ -1.74
AFF1-202ENST00000395146 SACSQ9NZJ4 4579 aa4.15□□□□□ -1.75
AFF1-202ENST00000395146 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
AFF1-202ENST00000395146 MT1FP04733 61 aa4.12□□□□□ -1.75
AFF1-202ENST00000395146 STARD9Q9P2P6 4700 aa4.12□□□□□ -1.75
AFF1-202ENST00000395146 DYNC2H1Q8NCM8 4307 aaKnown RBP4.11□□□□□ -1.75
AFF1-202ENST00000395146 LRP1BQ9NZR2 4599 aa4.11□□□□□ -1.75
AFF1-202ENST00000395146 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
AFF1-202ENST00000395146 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
AFF1-202ENST00000395146 DNAH8Q96JB1 4490 aa4.09□□□□□ -1.76
AFF1-202ENST00000395146 FAT2Q9NYQ8 4349 aa4.08□□□□□ -1.76
AFF1-202ENST00000395146 FAT1Q14517 4588 aa4.06□□□□□ -1.76
AFF1-202ENST00000395146 DNHD1Q96M86 4753 aa4.06□□□□□ -1.76
AFF1-202ENST00000395146 ANK2Q01484 3957 aa4.04□□□□□ -1.76
AFF1-202ENST00000395146 RYR1P21817 5038 aa4.01□□□□□ -1.77
AFF1-202ENST00000395146 APOBP04114 4563 aaKnown RBP4.01□□□□□ -1.77
AFF1-202ENST00000395146 DNAH6Q9C0G6 4158 aa3.99□□□□□ -1.77
AFF1-202ENST00000395146 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
AFF1-202ENST00000395146 DNAH7Q8WXX0 4024 aa3.97□□□□□ -1.77
AFF1-202ENST00000395146 CMYA5Q8N3K9 4069 aa3.95□□□□□ -1.78
AFF1-202ENST00000395146 VPS13BQ7Z7G8 4022 aa3.95□□□□□ -1.78
AFF1-202ENST00000395146 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
AFF1-202ENST00000395146 RYR3Q15413 4870 aa3.95□□□□□ -1.78
AFF1-202ENST00000395146 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
AFF1-202ENST00000395146 SPRR2FQ96RM1 72 aa3.91□□□□□ -1.78
AFF1-202ENST00000395146 PRKDCP78527 4128 aaKnown RBP3.91□□□□□ -1.78
AFF1-202ENST00000395146 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
AFF1-202ENST00000395146 KMT2AQ03164 3969 aa3.89□□□□□ -1.79
AFF1-202ENST00000395146 HECTD4Q9Y4D8 3996 aa3.89□□□□□ -1.79
AFF1-202ENST00000395146 MT1XP80297 61 aa3.86□□□□□ -1.79
AFF1-202ENST00000395146 RYR2Q92736 4967 aa3.86□□□□□ -1.79
AFF1-202ENST00000395146 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.8
AFF1-202ENST00000395146 LYSTQ99698 3801 aa3.82□□□□□ -1.8
AFF1-202ENST00000395146 HERC1Q15751 4861 aa3.8□□□□□ -1.8
AFF1-202ENST00000395146 MT1BP07438 61 aa3.79□□□□□ -1.8
AFF1-202ENST00000395146 KRTAP17-1Q9BYP8 105 aa3.79□□□□□ -1.8
AFF1-202ENST00000395146 FAT3Q8TDW7 4589 aa3.78□□□□□ -1.8
AFF1-202ENST00000395146 FRAS1Q86XX4 4008 aa3.76□□□□□ -1.81
AFF1-202ENST00000395146 KIAA1109Q2LD37 5005 aa3.75□□□□□ -1.81
AFF1-202ENST00000395146 MYCBP2O75592 4640 aa3.75□□□□□ -1.81
AFF1-202ENST00000395146 HSPG2P98160 4391 aa3.74□□□□□ -1.81
AFF1-202ENST00000395146 KRTAP9-8Q9BYQ0 159 aa3.73□□□□□ -1.81
AFF1-202ENST00000395146 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
AFF1-202ENST00000395146 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
AFF1-202ENST00000395146 MT1GP13640 62 aa3.68□□□□□ -1.82
AFF1-202ENST00000395146 LCE2CQ5TA81 110 aa3.67□□□□□ -1.82
AFF1-202ENST00000395146 KRTAP9-3Q9BYQ3 159 aa3.66□□□□□ -1.82
AFF1-202ENST00000395146 SPRR2EP22531 72 aa3.63□□□□□ -1.83
AFF1-202ENST00000395146 SPRR2BP35325 72 aa3.63□□□□□ -1.83
AFF1-202ENST00000395146 SPRR2AP35326 72 aa3.63□□□□□ -1.83
AFF1-202ENST00000395146 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
AFF1-202ENST00000395146 KRTAP4-8Q9BYQ9 185 aa3.61□□□□□ -1.83
AFF1-202ENST00000395146 PKD1P98161 4303 aa3.6□□□□□ -1.83
AFF1-202ENST00000395146 PCLOQ9Y6V0 5065 aa3.6□□□□□ -1.83
AFF1-202ENST00000395146 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
AFF1-202ENST00000395146 LCE2BO14633 110 aa3.54□□□□□ -1.84
AFF1-202ENST00000395146 HERC2O95714 4834 aa3.53□□□□□ -1.84
AFF1-202ENST00000395146 PKHD1L1Q86WI1 4243 aa3.53□□□□□ -1.84
AFF1-202ENST00000395146 SPRR2DP22532 72 aa3.53□□□□□ -1.84
AFF1-202ENST00000395146 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
AFF1-202ENST00000395146 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
AFF1-202ENST00000395146 MT1LQ93083 61 aa3.52□□□□□ -1.85
AFF1-202ENST00000395146 BIRC6Q9NR09 4857 aa3.52□□□□□ -1.85
AFF1-202ENST00000395146 HYDINQ4G0P3 5121 aa3.51□□□□□ -1.85
AFF1-202ENST00000395146 LRP2P98164 4655 aa3.51□□□□□ -1.85
AFF1-202ENST00000395146 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
AFF1-202ENST00000395146 FLGP20930 4061 aaPredicted RBP3.49□□□□□ -1.85
AFF1-202ENST00000395146 MT1EP04732 61 aa3.48□□□□□ -1.85
AFF1-202ENST00000395146 PKHD1P08F94 4074 aa3.45□□□□□ -1.86
AFF1-202ENST00000395146 KRTAP4-7Q9BYR0 210 aa3.44□□□□□ -1.86
AFF1-202ENST00000395146 TNXBP22105 4242 aa3.43□□□□□ -1.86
AFF1-202ENST00000395146 MUC17Q685J3 4493 aa3.43□□□□□ -1.86
AFF1-202ENST00000395146 KMT2CQ8NEZ4 4911 aaKnown RBP3.43□□□□□ -1.86
AFF1-202ENST00000395146 MT1MQ8N339 61 aa3.36□□□□□ -1.87
AFF1-202ENST00000395146 LPAP08519 4548 aa3.35□□□□□ -1.87
AFF1-202ENST00000395146 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
AFF1-202ENST00000395146 EPPK1P58107 5090 aaKnown RBP3.29□□□□□ -1.88
AFF1-202ENST00000395146 MT3P25713 68 aa3.28□□□□□ -1.88
AFF1-202ENST00000395146 PRM1P04553 51 aa3.25□□□□□ -1.89
AFF1-202ENST00000395146 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms