RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 DNAH5Q8TE73 4624 aa6.89□□□□□ -1.31
SPOCK1-202ENST00000394945 DNAH11Q96DT5 4516 aa6.84□□□□□ -1.31
SPOCK1-202ENST00000394945 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
SPOCK1-202ENST00000394945 DNAH1Q9P2D7 4330 aa6.76□□□□□ -1.33
SPOCK1-202ENST00000394945 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
SPOCK1-202ENST00000394945 PRKDCP78527 4128 aaKnown RBP6.72□□□□□ -1.33
SPOCK1-202ENST00000394945 FAT1Q14517 4588 aa6.72□□□□□ -1.33
SPOCK1-202ENST00000394945 KRTAP10-12P60413 245 aa6.71□□□□□ -1.33
SPOCK1-202ENST00000394945 DNAH10Q8IVF4 4471 aa6.7□□□□□ -1.34
SPOCK1-202ENST00000394945 STARD9Q9P2P6 4700 aa6.7□□□□□ -1.34
SPOCK1-202ENST00000394945 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
SPOCK1-202ENST00000394945 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
SPOCK1-202ENST00000394945 VPS13DQ5THJ4 4388 aa6.63□□□□□ -1.35
SPOCK1-202ENST00000394945 DYNC1H1Q14204 4646 aaKnown RBP6.62□□□□□ -1.35
SPOCK1-202ENST00000394945 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
SPOCK1-202ENST00000394945 RYR1P21817 5038 aa6.6□□□□□ -1.35
SPOCK1-202ENST00000394945 LRP1BQ9NZR2 4599 aa6.57□□□□□ -1.36
SPOCK1-202ENST00000394945 KIAA1109Q2LD37 5005 aa6.55□□□□□ -1.36
SPOCK1-202ENST00000394945 DNAH17Q9UFH2 4485 aa6.51□□□□□ -1.37
SPOCK1-202ENST00000394945 LYSTQ99698 3801 aa6.48□□□□□ -1.37
SPOCK1-202ENST00000394945 KMT2AQ03164 3969 aa6.47□□□□□ -1.37
SPOCK1-202ENST00000394945 ANK2Q01484 3957 aa6.46□□□□□ -1.38
SPOCK1-202ENST00000394945 DNAH2Q9P225 4427 aa6.44□□□□□ -1.38
SPOCK1-202ENST00000394945 DNAH8Q96JB1 4490 aa6.42□□□□□ -1.38
SPOCK1-202ENST00000394945 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
SPOCK1-202ENST00000394945 RYR3Q15413 4870 aa6.39□□□□□ -1.39
SPOCK1-202ENST00000394945 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
SPOCK1-202ENST00000394945 SACSQ9NZJ4 4579 aa6.37□□□□□ -1.39
SPOCK1-202ENST00000394945 KRTAP4-1Q9BYQ7 146 aa6.3□□□□□ -1.4
SPOCK1-202ENST00000394945 FAT2Q9NYQ8 4349 aa6.3□□□□□ -1.4
SPOCK1-202ENST00000394945 VPS13BQ7Z7G8 4022 aa6.3□□□□□ -1.4
SPOCK1-202ENST00000394945 DYNC2H1Q8NCM8 4307 aaKnown RBP6.28□□□□□ -1.4
SPOCK1-202ENST00000394945 FAT3Q8TDW7 4589 aa6.24□□□□□ -1.41
SPOCK1-202ENST00000394945 KRTAP17-1Q9BYP8 105 aa6.23□□□□□ -1.41
SPOCK1-202ENST00000394945 LRP1Q07954 4544 aaKnown RBP6.22□□□□□ -1.41
SPOCK1-202ENST00000394945 DNAH3Q8TD57 4116 aa6.22□□□□□ -1.41
SPOCK1-202ENST00000394945 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
SPOCK1-202ENST00000394945 CMYA5Q8N3K9 4069 aa6.22□□□□□ -1.41
SPOCK1-202ENST00000394945 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
SPOCK1-202ENST00000394945 HYDINQ4G0P3 5121 aa6.16□□□□□ -1.42
SPOCK1-202ENST00000394945 DNAH6Q9C0G6 4158 aa6.12□□□□□ -1.43
SPOCK1-202ENST00000394945 HERC2O95714 4834 aa6.09□□□□□ -1.43
SPOCK1-202ENST00000394945 RYR2Q92736 4967 aa6.08□□□□□ -1.44
SPOCK1-202ENST00000394945 DNAH7Q8WXX0 4024 aa6.06□□□□□ -1.44
SPOCK1-202ENST00000394945 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
SPOCK1-202ENST00000394945 MT1HP80294 61 aa6.03□□□□□ -1.44
SPOCK1-202ENST00000394945 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.44
SPOCK1-202ENST00000394945 FRAS1Q86XX4 4008 aa6.01□□□□□ -1.45
SPOCK1-202ENST00000394945 PKHD1P08F94 4074 aa6□□□□□ -1.45
SPOCK1-202ENST00000394945 KMT2CQ8NEZ4 4911 aaKnown RBP5.98□□□□□ -1.45
SPOCK1-202ENST00000394945 LRP2P98164 4655 aa5.98□□□□□ -1.45
SPOCK1-202ENST00000394945 HECTD4Q9Y4D8 3996 aa5.95□□□□□ -1.46
SPOCK1-202ENST00000394945 MT2AP02795 61 aa5.93□□□□□ -1.46
SPOCK1-202ENST00000394945 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
SPOCK1-202ENST00000394945 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
SPOCK1-202ENST00000394945 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
SPOCK1-202ENST00000394945 MT1FP04733 61 aa5.85□□□□□ -1.47
SPOCK1-202ENST00000394945 BIRC6Q9NR09 4857 aa5.85□□□□□ -1.47
SPOCK1-202ENST00000394945 HSPG2P98160 4391 aa5.82□□□□□ -1.48
SPOCK1-202ENST00000394945 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
SPOCK1-202ENST00000394945 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
SPOCK1-202ENST00000394945 EPPK1P58107 5090 aaKnown RBP5.68□□□□□ -1.5
SPOCK1-202ENST00000394945 PKD1P98161 4303 aa5.66□□□□□ -1.5
SPOCK1-202ENST00000394945 LPAP08519 4548 aa5.63□□□□□ -1.51
SPOCK1-202ENST00000394945 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
SPOCK1-202ENST00000394945 HERC1Q15751 4861 aa5.62□□□□□ -1.51
SPOCK1-202ENST00000394945 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
SPOCK1-202ENST00000394945 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.51
SPOCK1-202ENST00000394945 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
SPOCK1-202ENST00000394945 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
SPOCK1-202ENST00000394945 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
SPOCK1-202ENST00000394945 MT1XP80297 61 aa5.51□□□□□ -1.53
SPOCK1-202ENST00000394945 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
SPOCK1-202ENST00000394945 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.54
SPOCK1-202ENST00000394945 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.55
SPOCK1-202ENST00000394945 MT1BP07438 61 aa5.39□□□□□ -1.55
SPOCK1-202ENST00000394945 UBR4Q5T4S7 5183 aa5.38□□□□□ -1.55
SPOCK1-202ENST00000394945 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
SPOCK1-202ENST00000394945 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
SPOCK1-202ENST00000394945 TNXBP22105 4242 aa5.34□□□□□ -1.55
SPOCK1-202ENST00000394945 KRTAP9-3Q9BYQ3 159 aa5.31□□□□□ -1.56
SPOCK1-202ENST00000394945 PKHD1L1Q86WI1 4243 aa5.3□□□□□ -1.56
SPOCK1-202ENST00000394945 RNF213Q63HN8 5207 aa5.29□□□□□ -1.56
SPOCK1-202ENST00000394945 MT1GP13640 62 aa5.28□□□□□ -1.56
SPOCK1-202ENST00000394945 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
SPOCK1-202ENST00000394945 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
SPOCK1-202ENST00000394945 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
SPOCK1-202ENST00000394945 FAT4Q6V0I7 4981 aa5.22□□□□□ -1.57
SPOCK1-202ENST00000394945 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.58
SPOCK1-202ENST00000394945 MUC2Q02817 5179 aa5.19□□□□□ -1.58
SPOCK1-202ENST00000394945 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
SPOCK1-202ENST00000394945 LCE2BO14633 110 aa5.16□□□□□ -1.58
SPOCK1-202ENST00000394945 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
SPOCK1-202ENST00000394945 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
SPOCK1-202ENST00000394945 LCE3EQ5T5B0 92 aa5.11□□□□□ -1.59
SPOCK1-202ENST00000394945 HMCN2Q8NDA2 5059 aa5.07□□□□□ -1.6
SPOCK1-202ENST00000394945 MT1LQ93083 61 aa5□□□□□ -1.61
SPOCK1-202ENST00000394945 SPRR2EP22531 72 aa5□□□□□ -1.61
SPOCK1-202ENST00000394945 SPRR2BP35325 72 aa5□□□□□ -1.61
SPOCK1-202ENST00000394945 SPRR2AP35326 72 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms