RNA–Protein interactions for RNA: ENST00000394232.5

SV2B-202, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SV2B, Length 11,279 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-202ENST00000394232 MT1HL1P0DM35 61 aa2.74□□□□□ -1.97
SV2B-202ENST00000394232 DNAH1Q9P2D7 4330 aa2.73□□□□□ -1.97
SV2B-202ENST00000394232 DNAH3Q8TD57 4116 aa2.7□□□□□ -1.98
SV2B-202ENST00000394232 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
SV2B-202ENST00000394232 DNAH7Q8WXX0 4024 aa2.68□□□□□ -1.98
SV2B-202ENST00000394232 HECTD4Q9Y4D8 3996 aa2.68□□□□□ -1.98
SV2B-202ENST00000394232 DNAH2Q9P225 4427 aa2.66□□□□□ -1.98
SV2B-202ENST00000394232 HUWE1Q7Z6Z7 4374 aaKnown RBP2.63□□□□□ -1.99
SV2B-202ENST00000394232 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
SV2B-202ENST00000394232 KRTAP10-4P60372 401 aaPredicted RBP2.63□□□□□ -1.99
SV2B-202ENST00000394232 ANK2Q01484 3957 aa2.62□□□□□ -1.99
SV2B-202ENST00000394232 LORP23490 312 aaPredicted RBP2.57□□□□□ -2
SV2B-202ENST00000394232 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
SV2B-202ENST00000394232 KRTAP4-5Q9BYR2 181 aa2.56□□□□□ -2
SV2B-202ENST00000394232 VPS13BQ7Z7G8 4022 aa2.54□□□□□ -2
SV2B-202ENST00000394232 KMT2AQ03164 3969 aa2.53□□□□□ -2
SV2B-202ENST00000394232 DNAH10Q8IVF4 4471 aa2.52□□□□□ -2.01
SV2B-202ENST00000394232 DNAH6Q9C0G6 4158 aa2.48□□□□□ -2.01
SV2B-202ENST00000394232 DNAH9Q9NYC9 4486 aa2.45□□□□□ -2.02
SV2B-202ENST00000394232 PRKDCP78527 4128 aaKnown RBP2.45□□□□□ -2.02
SV2B-202ENST00000394232 DNAH11Q96DT5 4516 aa2.44□□□□□ -2.02
SV2B-202ENST00000394232 SPRR2GQ9BYE4 73 aa2.44□□□□□ -2.02
SV2B-202ENST00000394232 FRAS1Q86XX4 4008 aa2.42□□□□□ -2.02
SV2B-202ENST00000394232 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
SV2B-202ENST00000394232 KRTAP19-5Q3LI72 72 aa2.41□□□□□ -2.02
SV2B-202ENST00000394232 KRTAP10-7P60409 375 aaPredicted RBP2.4□□□□□ -2.02
SV2B-202ENST00000394232 KRTAP4-1Q9BYQ7 146 aa2.4□□□□□ -2.03
SV2B-202ENST00000394232 FLGP20930 4061 aaPredicted RBP2.39□□□□□ -2.03
SV2B-202ENST00000394232 VPS13DQ5THJ4 4388 aa2.39□□□□□ -2.03
SV2B-202ENST00000394232 KRTAP19-4Q3LI73 84 aa2.39□□□□□ -2.03
SV2B-202ENST00000394232 MT2AP02795 61 aa2.38□□□□□ -2.03
SV2B-202ENST00000394232 MT1HP80294 61 aa2.38□□□□□ -2.03
SV2B-202ENST00000394232 DNAH17Q9UFH2 4485 aa2.37□□□□□ -2.03
SV2B-202ENST00000394232 DYNC2H1Q8NCM8 4307 aaKnown RBP2.36□□□□□ -2.03
SV2B-202ENST00000394232 FAT2Q9NYQ8 4349 aa2.35□□□□□ -2.03
SV2B-202ENST00000394232 SPRR2FQ96RM1 72 aa2.35□□□□□ -2.03
SV2B-202ENST00000394232 LRP1Q07954 4544 aaKnown RBP2.33□□□□□ -2.04
SV2B-202ENST00000394232 MT1FP04733 61 aa2.33□□□□□ -2.04
SV2B-202ENST00000394232 DNAH8Q96JB1 4490 aa2.33□□□□□ -2.04
SV2B-202ENST00000394232 PLECQ15149 4684 aaKnown RBP2.28□□□□□ -2.04
SV2B-202ENST00000394232 PKHD1P08F94 4074 aa2.27□□□□□ -2.05
SV2B-202ENST00000394232 LCE3BQ5TA77 95 aa2.25□□□□□ -2.05
SV2B-202ENST00000394232 DNAH5Q8TE73 4624 aa2.24□□□□□ -2.05
SV2B-202ENST00000394232 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
SV2B-202ENST00000394232 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
SV2B-202ENST00000394232 STARD9Q9P2P6 4700 aa2.21□□□□□ -2.06
SV2B-202ENST00000394232 SACSQ9NZJ4 4579 aa2.21□□□□□ -2.06
SV2B-202ENST00000394232 DYNC1H1Q14204 4646 aaKnown RBP2.2□□□□□ -2.06
SV2B-202ENST00000394232 MT1XP80297 61 aa2.19□□□□□ -2.06
SV2B-202ENST00000394232 KRTAP19-1Q8IUB9 90 aa2.19□□□□□ -2.06
SV2B-202ENST00000394232 SPRR2EP22531 72 aa2.18□□□□□ -2.06
SV2B-202ENST00000394232 SPRR2BP35325 72 aa2.18□□□□□ -2.06
SV2B-202ENST00000394232 SPRR2AP35326 72 aa2.18□□□□□ -2.06
SV2B-202ENST00000394232 SPRR5A0A1B0GTR4 108 aa2.18□□□□□ -2.06
SV2B-202ENST00000394232 FAT1Q14517 4588 aa2.18□□□□□ -2.06
SV2B-202ENST00000394232 PKHD1L1Q86WI1 4243 aa2.17□□□□□ -2.06
SV2B-202ENST00000394232 MT1GP13640 62 aa2.16□□□□□ -2.06
SV2B-202ENST00000394232 PKD1P98161 4303 aa2.16□□□□□ -2.06
SV2B-202ENST00000394232 APOBP04114 4563 aaKnown RBP2.14□□□□□ -2.07
SV2B-202ENST00000394232 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
SV2B-202ENST00000394232 LCE2BO14633 110 aa2.13□□□□□ -2.07
SV2B-202ENST00000394232 DNHD1Q96M86 4753 aa2.12□□□□□ -2.07
SV2B-202ENST00000394232 LRP1BQ9NZR2 4599 aa2.12□□□□□ -2.07
SV2B-202ENST00000394232 HSPG2P98160 4391 aa2.11□□□□□ -2.07
SV2B-202ENST00000394232 SPRR2DP22532 72 aa2.11□□□□□ -2.07
SV2B-202ENST00000394232 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
SV2B-202ENST00000394232 MT1BP07438 61 aa2.09□□□□□ -2.07
SV2B-202ENST00000394232 MYCBP2O75592 4640 aa2.06□□□□□ -2.08
SV2B-202ENST00000394232 TNXBP22105 4242 aa2.06□□□□□ -2.08
SV2B-202ENST00000394232 FAT3Q8TDW7 4589 aa2.06□□□□□ -2.08
SV2B-202ENST00000394232 KRTAP9-8Q9BYQ0 159 aa2.05□□□□□ -2.08
SV2B-202ENST00000394232 RYR1P21817 5038 aa2.05□□□□□ -2.08
SV2B-202ENST00000394232 HYDINQ4G0P3 5121 aa2.05□□□□□ -2.08
SV2B-202ENST00000394232 KRTAP4-8A0A0G2JLE6 195 aa2.04□□□□□ -2.08
SV2B-202ENST00000394232 KRTAP4-8Q9BYQ9 185 aa2.04□□□□□ -2.08
SV2B-202ENST00000394232 MT1LQ93083 61 aa2.03□□□□□ -2.08
SV2B-202ENST00000394232 KRTAP9-3Q9BYQ3 159 aa2.03□□□□□ -2.08
SV2B-202ENST00000394232 MT3P25713 68 aa2.02□□□□□ -2.09
SV2B-202ENST00000394232 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
SV2B-202ENST00000394232 LCE2CQ5TA81 110 aa1.99□□□□□ -2.09
SV2B-202ENST00000394232 MT1EP04732 61 aa1.98□□□□□ -2.09
SV2B-202ENST00000394232 PRM1P04553 51 aa1.97□□□□□ -2.09
SV2B-202ENST00000394232 KRTAP17-1Q9BYP8 105 aa1.96□□□□□ -2.1
SV2B-202ENST00000394232 LPAP08519 4548 aa1.95□□□□□ -2.1
SV2B-202ENST00000394232 KRTAP4-7Q9BYR0 210 aa1.95□□□□□ -2.1
SV2B-202ENST00000394232 RYR3Q15413 4870 aa1.94□□□□□ -2.1
SV2B-202ENST00000394232 LCE2DQ5TA82 110 aaPredicted RBP1.94□□□□□ -2.1
SV2B-202ENST00000394232 MT1MQ8N339 61 aa1.93□□□□□ -2.1
SV2B-202ENST00000394232 KMT2CQ8NEZ4 4911 aaKnown RBP1.91□□□□□ -2.1
SV2B-202ENST00000394232 HERC1Q15751 4861 aa1.89□□□□□ -2.11
SV2B-202ENST00000394232 MT4P47944 62 aa1.89□□□□□ -2.11
SV2B-202ENST00000394232 PCLOQ9Y6V0 5065 aa1.88□□□□□ -2.11
SV2B-202ENST00000394232 LOC100996750A0A140TA64 210 aa1.87□□□□□ -2.11
SV2B-202ENST00000394232 LRP2P98164 4655 aa1.87□□□□□ -2.11
SV2B-202ENST00000394232 LCE1DQ5T752 114 aa1.87□□□□□ -2.11
SV2B-202ENST00000394232 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
SV2B-202ENST00000394232 MUC17Q685J3 4493 aa1.86□□□□□ -2.11
SV2B-202ENST00000394232 KRTAP19-2Q3LHN2 52 aa1.85□□□□□ -2.11
SV2B-202ENST00000394232 KRTAP4-3Q9BYR4 195 aa1.83□□□□□ -2.12
SV2B-202ENST00000394232 KRTAP2-3P0C7H8 128 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms