RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 BIRC6Q9NR09 4857 aa12.65□□□□□ -0.38
PICALM-202ENST00000393346 PRAC1Q96KF2 57 aa12.63□□□□□ -0.39
PICALM-202ENST00000393346 ABCA13Q86UQ4 5058 aa12.61□□□□□ -0.39
PICALM-202ENST00000393346 ADM2Q7Z4H4 148 aa12.61□□□□□ -0.39
PICALM-202ENST00000393346 KRTAP3-1Q9BYR8 98 aa12.6□□□□□ -0.39
PICALM-202ENST00000393346 HERC2O95714 4834 aa12.54□□□□□ -0.4
PICALM-202ENST00000393346 H0YAA0 97 aa12.45□□□□□ -0.42
PICALM-202ENST00000393346 A0A1B0GU33 70 aa12.4□□□□□ -0.42
PICALM-202ENST00000393346 COX6B2Q6YFQ2 88 aa12.39□□□□□ -0.43
PICALM-202ENST00000393346 H1FX-AS1Q4G0G2 97 aa12.36□□□□□ -0.43
PICALM-202ENST00000393346 J3QL48 77 aa12.32□□□□□ -0.44
PICALM-202ENST00000393346 LINC01554Q52M75 96 aa12.29□□□□□ -0.44
PICALM-202ENST00000393346 CSAG1Q6PB30 78 aa12.29□□□□□ -0.44
PICALM-202ENST00000393346 PCLOQ9Y6V0 5065 aa12.23□□□□□ -0.45
PICALM-202ENST00000393346 LPAP08519 4548 aa12.22□□□□□ -0.45
PICALM-202ENST00000393346 XP32Q5T750 250 aa12.21□□□□□ -0.45
PICALM-202ENST00000393346 LRP2P98164 4655 aa12.17□□□□□ -0.46
PICALM-202ENST00000393346 TPRXLQ17RH7 258 aa12.13□□□□□ -0.47
PICALM-202ENST00000393346 RPL37P61927 97 aaKnown RBP12.12□□□□□ -0.47
PICALM-202ENST00000393346 KRTAP3-3Q9BYR6 98 aa12.06□□□□□ -0.48
PICALM-202ENST00000393346 K7ERS5 55 aa12.04□□□□□ -0.48
PICALM-202ENST00000393346 HERC1Q15751 4861 aa12.02□□□□□ -0.49
PICALM-202ENST00000393346 KRTAP10-6P60371 365 aaPredicted RBP12□□□□□ -0.49
PICALM-202ENST00000393346 KRTAP25-1Q3LHN0 102 aa11.98□□□□□ -0.49
PICALM-202ENST00000393346 S4R3F8 94 aa11.93□□□□□ -0.5
PICALM-202ENST00000393346 KRTAP3-2Q9BYR7 98 aa11.91□□□□□ -0.5
PICALM-202ENST00000393346 KRTAP13-4Q3LI77 160 aa11.86□□□□□ -0.51
PICALM-202ENST00000393346 ROMO1P60602 79 aa11.78□□□□□ -0.52
PICALM-202ENST00000393346 A0A0D9SG42 100 aa11.75□□□□□ -0.53
PICALM-202ENST00000393346 P0C880 135 aa11.72□□□□□ -0.53
PICALM-202ENST00000393346 HMCN2Q8NDA2 5059 aa11.72□□□□□ -0.53
PICALM-202ENST00000393346 SEC61BP60468 96 aaKnown RBP11.71□□□□□ -0.54
PICALM-202ENST00000393346 CRIPTQ9P021 101 aa11.71□□□□□ -0.54
PICALM-202ENST00000393346 MUC17Q685J3 4493 aa11.59□□□□□ -0.55
PICALM-202ENST00000393346 MUC2Q02817 5179 aa11.59□□□□□ -0.55
PICALM-202ENST00000393346 KRTAP4-1Q9BYQ7 146 aa11.52□□□□□ -0.57
PICALM-202ENST00000393346 KRTAP12-2P59991 146 aa11.49□□□□□ -0.57
PICALM-202ENST00000393346 KRTAP12-1P59990 96 aa11.42□□□□□ -0.58
PICALM-202ENST00000393346 M0QZ58 72 aa11.41□□□□□ -0.58
PICALM-202ENST00000393346 SPINT4Q6UDR6 99 aa11.37□□□□□ -0.59
PICALM-202ENST00000393346 C10orf95Q9H7T3 257 aa11.31□□□□□ -0.6
PICALM-202ENST00000393346 UBR4Q5T4S7 5183 aa11.31□□□□□ -0.6
PICALM-202ENST00000393346 RNF213Q63HN8 5207 aa11.23□□□□□ -0.61
PICALM-202ENST00000393346 H3BS24 57 aa11.22□□□□□ -0.61
PICALM-202ENST00000393346 KRTAP19-2Q3LHN2 52 aa11.17□□□□□ -0.62
PICALM-202ENST00000393346 R4GN34 69 aa11.07□□□□□ -0.64
PICALM-202ENST00000393346 FAT4Q6V0I7 4981 aa11.06□□□□□ -0.64
PICALM-202ENST00000393346 FLGP20930 4061 aaPredicted RBP11.05□□□□□ -0.64
PICALM-202ENST00000393346 KRTAP15-1Q3LI76 137 aa10.94□□□□□ -0.66
PICALM-202ENST00000393346 LORP23490 312 aaPredicted RBP10.91□□□□□ -0.66
PICALM-202ENST00000393346 LCE2CQ5TA81 110 aa10.89□□□□□ -0.67
PICALM-202ENST00000393346 MT1HP80294 61 aa10.68□□□□□ -0.7
PICALM-202ENST00000393346 M0R2T5 61 aa10.66□□□□□ -0.7
PICALM-202ENST00000393346 NDUFAF8A1L188 74 aa10.64□□□□□ -0.71
PICALM-202ENST00000393346 CAMK2N1Q7Z7J9 78 aa10.51□□□□□ -0.73
PICALM-202ENST00000393346 PLAC4Q8WY50 150 aa10.45□□□□□ -0.74
PICALM-202ENST00000393346 PP632Q6XCG6 107 aa10.43□□□□□ -0.74
PICALM-202ENST00000393346 KRTAP9-8Q9BYQ0 159 aa10.29□□□□□ -0.76
PICALM-202ENST00000393346 MT2AP02795 61 aa10.27□□□□□ -0.77
PICALM-202ENST00000393346 MT1FP04733 61 aa10.23□□□□□ -0.77
PICALM-202ENST00000393346 KRTAP10-10P60014 251 aa10.23□□□□□ -0.77
PICALM-202ENST00000393346 LCE2AQ5TA79 106 aaPredicted RBP10.16□□□□□ -0.78
PICALM-202ENST00000393346 TNP1P09430 55 aa10.16□□□□□ -0.78
PICALM-202ENST00000393346 KRTAP23-1A1A580 65 aa10.11□□□□□ -0.79
PICALM-202ENST00000393346 KRTAP19-1Q8IUB9 90 aa10.08□□□□□ -0.8
PICALM-202ENST00000393346 SPRR2GQ9BYE4 73 aa10.08□□□□□ -0.8
PICALM-202ENST00000393346 LUZP6Q538Z0 58 aa9.97□□□□□ -0.81
PICALM-202ENST00000393346 KRTAP9-3Q9BYQ3 159 aa9.9□□□□□ -0.82
PICALM-202ENST00000393346 KRTAP19-8Q3LI54 63 aa9.76□□□□□ -0.85
PICALM-202ENST00000393346 SPRR5A0A1B0GTR4 108 aa9.76□□□□□ -0.85
PICALM-202ENST00000393346 MT1BP07438 61 aa9.68□□□□□ -0.86
PICALM-202ENST00000393346 USH2AO75445 5202 aa9.65□□□□□ -0.86
PICALM-202ENST00000393346 LCE2BO14633 110 aa9.65□□□□□ -0.87
PICALM-202ENST00000393346 LCE3AQ5TA76 89 aa9.59□□□□□ -0.87
PICALM-202ENST00000393346 A0A0A0MQY5 61 aa9.5□□□□□ -0.89
PICALM-202ENST00000393346 MT1XP80297 61 aa9.4□□□□□ -0.9
PICALM-202ENST00000393346 KRTAP10-5P60370 271 aa9.39□□□□□ -0.91
PICALM-202ENST00000393346 KRTAP8-1Q8IUC2 63 aa9.39□□□□□ -0.91
PICALM-202ENST00000393346 FSIP2Q5CZC0 6907 aa9.38□□□□□ -0.91
PICALM-202ENST00000393346 PRO2289Q9P1D8 64 aa9.27□□□□□ -0.93
PICALM-202ENST00000393346 KRTAP10-12P60413 245 aa9.2□□□□□ -0.94
PICALM-202ENST00000393346 SSPOA2VEC9 5147 aa9.19□□□□□ -0.94
PICALM-202ENST00000393346 KRTAP12-3P60328 96 aa9.14□□□□□ -0.95
PICALM-202ENST00000393346 LCE2DQ5TA82 110 aaPredicted RBP9.12□□□□□ -0.95
PICALM-202ENST00000393346 KRTAP10-7P60409 375 aaPredicted RBP9.08□□□□□ -0.96
PICALM-202ENST00000393346 KMT2DO14686 5537 aa9.06□□□□□ -0.96
PICALM-202ENST00000393346 KRTAP19-6Q3LI70 58 aa8.96□□□□□ -0.97
PICALM-202ENST00000393346 KRTAP9-2Q9BYQ4 174 aa8.82□□□□□ -1
PICALM-202ENST00000393346 FCGBPQ9Y6R7 5405 aaPredicted RBP8.76□□□□□ -1.01
PICALM-202ENST00000393346 KRTAP4-8A0A0G2JLE6 195 aa8.74□□□□□ -1.01
PICALM-202ENST00000393346 KRTAP4-8Q9BYQ9 185 aa8.74□□□□□ -1.01
PICALM-202ENST00000393346 KRTAP19-5Q3LI72 72 aa8.72□□□□□ -1.01
PICALM-202ENST00000393346 INE1O15225 51 aa8.64□□□□□ -1.03
PICALM-202ENST00000393346 LCE3CQ5T5A8 94 aa8.62□□□□□ -1.03
PICALM-202ENST00000393346 CRCT1Q9UGL9 99 aa8.51□□□□□ -1.05
PICALM-202ENST00000393346 MACF1Q9UPN3 7388 aaKnown RBP8.42□□□□□ -1.06
PICALM-202ENST00000393346 KRTAP19-7Q3SYF9 63 aa8.39□□□□□ -1.07
PICALM-202ENST00000393346 KRTAP9-6A8MVA2 160 aa8.29□□□□□ -1.08
PICALM-202ENST00000393346 SYNE2Q8WXH0 6885 aaKnown RBP8.23□□□□□ -1.09
PICALM-202ENST00000393346 KRTAP19-4Q3LI73 84 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms