RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 PRXQ9BXM0 1461 aa0.09□□□□□ -2.4
TRAJ3-201ENST00000390534 FLGP20930 4061 aaPredicted RBP0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 ITPR3Q14573 2671 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 UGGT1Q9NYU2 1555 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 EEA1Q15075 1411 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 PRLHP81277 87 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 DEFB106AQ8N104 65 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 LINC00308Q8TCZ7 52 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 HIVEP1P15822 2718 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 ITPR2Q14571 2701 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 CEP290O15078 2479 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 GPR98Q8WXG9 6306 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 NEBP20929 6669 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 NBEAL1Q6ZS30 2694 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 C3P01024 1663 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 ALS2Q96Q42 1657 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 FASNP49327 2511 aaKnown RBP0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 CLASP1Q7Z460 1538 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 ABCA10Q8WWZ4 1543 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 KIAA0586Q9BVV6 1533 aa0.08□□□□□ -2.4
TRAJ3-201ENST00000390534 FLNCQ14315 2725 aa0.07□□□□□ -2.4
TRAJ3-201ENST00000390534 USP9XQ93008 2570 aaPredicted RBP0.07□□□□□ -2.4
TRAJ3-201ENST00000390534 SYNE2Q8WXH0 6885 aaKnown RBP0.07□□□□□ -2.4
TRAJ3-201ENST00000390534 H0YGX0 51 aa0.07□□□□□ -2.4
TRAJ3-201ENST00000390534 KRTAP19-2Q3LHN2 52 aa0.07□□□□□ -2.4
TRAJ3-201ENST00000390534 SPTBN4Q9H254 2564 aa0.07□□□□□ -2.4
TRAJ3-201ENST00000390534 SPG11Q96JI7 2443 aa0.07□□□□□ -2.4
TRAJ3-201ENST00000390534 COL6A5A8TX70 2615 aa0.07□□□□□ -2.4
TRAJ3-201ENST00000390534 EFCAB6Q5THR3 1501 aa0.07□□□□□ -2.4
TRAJ3-201ENST00000390534 TIAM1Q13009 1591 aa0.06□□□□□ -2.4
TRAJ3-201ENST00000390534 MAST1Q9Y2H9 1570 aa0.06□□□□□ -2.4
TRAJ3-201ENST00000390534 SRRM2Q9UQ35 2752 aaKnown RBP0.06□□□□□ -2.4
TRAJ3-201ENST00000390534 AHNAKQ09666 5890 aaKnown RBP0.06□□□□□ -2.4
TRAJ3-201ENST00000390534 H3BNG1 76 aa0.06□□□□□ -2.4
TRAJ3-201ENST00000390534 SPRR2BP35325 72 aa0.06□□□□□ -2.4
TRAJ3-201ENST00000390534 TMEM167BQ9NRX6 74 aa0.06□□□□□ -2.4
TRAJ3-201ENST00000390534 STAB2Q8WWQ8 2551 aa0.06□□□□□ -2.4
TRAJ3-201ENST00000390534 USP9YO00507 2555 aaPredicted RBP0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 ITSN2Q9NZM3 1697 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 SONP18583 2426 aaKnown RBP0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 LY75O60449 1722 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 CENPEQ02224 2701 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 AGLP35573 1532 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 C9orf92A6NGG3 77 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 H3BUA1 57 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 PLNP26678 52 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 TIMM8BQ9Y5J9 83 aaPredicted RBP0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 ANKRD11Q6UB99 2663 aaPredicted RBP0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 ADCY10Q96PN6 1610 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 CROCC2H7BZ55 1655 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 KIF1AQ12756 1690 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 MTORP42345 2549 aa0.05□□□□□ -2.4
TRAJ3-201ENST00000390534 ANKRD36CQ5JPF3 1778 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 LRRK2Q5S007 2527 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 IGLV5-48A0A075B6I7 105 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 SMIM27A0A1W2PRY6 76 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 SNRPGP15A8MWD9 76 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 KRTAP6-2Q3LI66 62 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 CMC2Q9NRP2 79 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 ABRACLQ9P1F3 81 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 KAAG1Q9UBP8 84 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 MACF1Q9UPN3 7388 aaKnown RBP0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 KIF21BO75037 1637 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 PREX2Q70Z35 1606 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 NRXN3Q9Y4C0 1643 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 TOGARAM1Q9Y4F4 1720 aa0.04□□□□□ -2.4
TRAJ3-201ENST00000390534 MROH2BQ7Z745 1585 aa0.03□□□□□ -2.4
TRAJ3-201ENST00000390534 CEP250Q9BV73 2442 aa0.03□□□□□ -2.4
TRAJ3-201ENST00000390534 MGAM2Q2M2H8 2515 aa0.03□□□□□ -2.4
TRAJ3-201ENST00000390534 TFF3Q07654 80 aa0.03□□□□□ -2.4
TRAJ3-201ENST00000390534 WFDC10BQ8IUB3 73 aa0.03□□□□□ -2.4
TRAJ3-201ENST00000390534 FANCD2Q9BXW9 1451 aa0.03□□□□□ -2.41
TRAJ3-201ENST00000390534 DOPEY1Q5JWR5 2465 aa0.03□□□□□ -2.41
TRAJ3-201ENST00000390534 ANKHD1Q8IWZ3 2542 aaKnown RBP0.03□□□□□ -2.41
TRAJ3-201ENST00000390534 MROH2AA6NES4 1674 aa0.02□□□□□ -2.41
TRAJ3-201ENST00000390534 CDC42BPAQ5VT25 1732 aa0.02□□□□□ -2.41
TRAJ3-201ENST00000390534 ACACAQ13085 2346 aa0.02□□□□□ -2.41
TRAJ3-201ENST00000390534 FAM186AA6NE01 2351 aa0.02□□□□□ -2.41
TRAJ3-201ENST00000390534 RIF1Q5UIP0 2472 aaKnown RBP0.02□□□□□ -2.41
TRAJ3-201ENST00000390534 CCDC168Q8NDH2 2452 aa0.02□□□□□ -2.41
TRAJ3-201ENST00000390534 TLN1Q9Y490 2541 aaKnown RBP0.02□□□□□ -2.41
TRAJ3-201ENST00000390534 SPRR2AP35326 72 aa0.02□□□□□ -2.41
TRAJ3-201ENST00000390534 NOP10Q9NPE3 64 aaKnown RBP0.02□□□□□ -2.41
TRAJ3-201ENST00000390534 ACACBO00763 2458 aa0.02□□□□□ -2.41
TRAJ3-201ENST00000390534 CEP295Q9C0D2 2601 aa0.01□□□□□ -2.41
TRAJ3-201ENST00000390534 MMP24-AS1A0A0U1RRL7 71 aa0.01□□□□□ -2.41
TRAJ3-201ENST00000390534 DEFB110Q30KQ9 67 aa0.01□□□□□ -2.41
TRAJ3-201ENST00000390534 SYCP2Q9BX26 1530 aa0.01□□□□□ -2.41
TRAJ3-201ENST00000390534 LINC01546A6NGU7 62 aa0□□□□□ -2.41
TRAJ3-201ENST00000390534 MT1AP04731 61 aa0□□□□□ -2.41
TRAJ3-201ENST00000390534 SPRR2EP22531 72 aa0□□□□□ -2.41
TRAJ3-201ENST00000390534 KRTAP20-2Q3LI61 65 aa0□□□□□ -2.41
TRAJ3-201ENST00000390534 KRTAP20-1Q3LI63 56 aa0□□□□□ -2.41
TRAJ3-201ENST00000390534 KRTAP19-6Q3LI70 58 aa0□□□□□ -2.41
TRAJ3-201ENST00000390534 SMIM2Q9BVW6 85 aa0□□□□□ -2.41
TRAJ3-201ENST00000390534 TLN2Q9Y4G6 2542 aa0□□□□□ -2.41
TRAJ3-201ENST00000390534 ABCA5Q8WWZ7 1642 aa-0.01□□□□□ -2.41
TRAJ3-201ENST00000390534 ABCC8Q09428 1581 aa-0.01□□□□□ -2.41
TRAJ3-201ENST00000390534 M0QY20 66 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms