RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 RYR1P21817 5038 aa6.1□□□□□ -1.43
PTPRN2-203ENST00000389418 PRKDCP78527 4128 aaKnown RBP6.03□□□□□ -1.44
PTPRN2-203ENST00000389418 ANK2Q01484 3957 aa6.03□□□□□ -1.44
PTPRN2-203ENST00000389418 DNAH1Q9P2D7 4330 aa6.01□□□□□ -1.45
PTPRN2-203ENST00000389418 KIAA1109Q2LD37 5005 aa6.01□□□□□ -1.45
PTPRN2-203ENST00000389418 VPS13DQ5THJ4 4388 aa6□□□□□ -1.45
PTPRN2-203ENST00000389418 STARD9Q9P2P6 4700 aa5.99□□□□□ -1.45
PTPRN2-203ENST00000389418 KRTAP3-3Q9BYR6 98 aa5.96□□□□□ -1.45
PTPRN2-203ENST00000389418 DNAH10Q8IVF4 4471 aa5.96□□□□□ -1.46
PTPRN2-203ENST00000389418 KRTAP3-2Q9BYR7 98 aa5.93□□□□□ -1.46
PTPRN2-203ENST00000389418 DYNC1H1Q14204 4646 aaKnown RBP5.92□□□□□ -1.46
PTPRN2-203ENST00000389418 LYSTQ99698 3801 aa5.91□□□□□ -1.46
PTPRN2-203ENST00000389418 MYCBP2O75592 4640 aa5.9□□□□□ -1.46
PTPRN2-203ENST00000389418 DNAH8Q96JB1 4490 aa5.86□□□□□ -1.47
PTPRN2-203ENST00000389418 DNAH17Q9UFH2 4485 aa5.86□□□□□ -1.47
PTPRN2-203ENST00000389418 LRP1BQ9NZR2 4599 aa5.85□□□□□ -1.47
PTPRN2-203ENST00000389418 HYDINQ4G0P3 5121 aa5.82□□□□□ -1.48
PTPRN2-203ENST00000389418 DNAH3Q8TD57 4116 aa5.82□□□□□ -1.48
PTPRN2-203ENST00000389418 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
PTPRN2-203ENST00000389418 RYR3Q15413 4870 aa5.81□□□□□ -1.48
PTPRN2-203ENST00000389418 FAT3Q8TDW7 4589 aa5.8□□□□□ -1.48
PTPRN2-203ENST00000389418 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
PTPRN2-203ENST00000389418 DNAH2Q9P225 4427 aa5.75□□□□□ -1.49
PTPRN2-203ENST00000389418 SACSQ9NZJ4 4579 aa5.75□□□□□ -1.49
PTPRN2-203ENST00000389418 KMT2AQ03164 3969 aa5.74□□□□□ -1.49
PTPRN2-203ENST00000389418 VPS13BQ7Z7G8 4022 aa5.73□□□□□ -1.49
PTPRN2-203ENST00000389418 CMYA5Q8N3K9 4069 aa5.73□□□□□ -1.49
PTPRN2-203ENST00000389418 KRTAP4-1Q9BYQ7 146 aa5.71□□□□□ -1.5
PTPRN2-203ENST00000389418 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
PTPRN2-203ENST00000389418 CRCT1Q9UGL9 99 aa5.7□□□□□ -1.5
PTPRN2-203ENST00000389418 DYNC2H1Q8NCM8 4307 aaKnown RBP5.7□□□□□ -1.5
PTPRN2-203ENST00000389418 FAT2Q9NYQ8 4349 aa5.68□□□□□ -1.5
PTPRN2-203ENST00000389418 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
PTPRN2-203ENST00000389418 LRP1Q07954 4544 aaKnown RBP5.64□□□□□ -1.51
PTPRN2-203ENST00000389418 KRTAP17-1Q9BYP8 105 aa5.6□□□□□ -1.51
PTPRN2-203ENST00000389418 APOBP04114 4563 aaKnown RBP5.57□□□□□ -1.52
PTPRN2-203ENST00000389418 RYR2Q92736 4967 aa5.57□□□□□ -1.52
PTPRN2-203ENST00000389418 HERC2O95714 4834 aa5.56□□□□□ -1.52
PTPRN2-203ENST00000389418 PCLOQ9Y6V0 5065 aa5.54□□□□□ -1.52
PTPRN2-203ENST00000389418 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
PTPRN2-203ENST00000389418 DNAH6Q9C0G6 4158 aa5.5□□□□□ -1.53
PTPRN2-203ENST00000389418 DNAH7Q8WXX0 4024 aa5.49□□□□□ -1.53
PTPRN2-203ENST00000389418 LRP2P98164 4655 aa5.47□□□□□ -1.53
PTPRN2-203ENST00000389418 MT1HP80294 61 aa5.45□□□□□ -1.54
PTPRN2-203ENST00000389418 INE1O15225 51 aa5.44□□□□□ -1.54
PTPRN2-203ENST00000389418 LCE3AQ5TA76 89 aa5.42□□□□□ -1.54
PTPRN2-203ENST00000389418 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
PTPRN2-203ENST00000389418 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
PTPRN2-203ENST00000389418 HECTD4Q9Y4D8 3996 aa5.38□□□□□ -1.55
PTPRN2-203ENST00000389418 MT2AP02795 61 aa5.37□□□□□ -1.55
PTPRN2-203ENST00000389418 FSIP2Q5CZC0 6907 aa5.35□□□□□ -1.55
PTPRN2-203ENST00000389418 PKHD1P08F94 4074 aa5.33□□□□□ -1.56
PTPRN2-203ENST00000389418 KRTAP8-1Q8IUC2 63 aa5.32□□□□□ -1.56
PTPRN2-203ENST00000389418 MT1FP04733 61 aa5.31□□□□□ -1.56
PTPRN2-203ENST00000389418 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
PTPRN2-203ENST00000389418 FRAS1Q86XX4 4008 aa5.3□□□□□ -1.56
PTPRN2-203ENST00000389418 HSPG2P98160 4391 aa5.28□□□□□ -1.56
PTPRN2-203ENST00000389418 PKD1P98161 4303 aa5.2□□□□□ -1.58
PTPRN2-203ENST00000389418 EPPK1P58107 5090 aaKnown RBP5.18□□□□□ -1.58
PTPRN2-203ENST00000389418 LPAP08519 4548 aa5.12□□□□□ -1.59
PTPRN2-203ENST00000389418 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
PTPRN2-203ENST00000389418 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
PTPRN2-203ENST00000389418 SPRR2FQ96RM1 72 aa5.09□□□□□ -1.6
PTPRN2-203ENST00000389418 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
PTPRN2-203ENST00000389418 HERC1Q15751 4861 aa5.07□□□□□ -1.6
PTPRN2-203ENST00000389418 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
PTPRN2-203ENST00000389418 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
PTPRN2-203ENST00000389418 RNF213Q63HN8 5207 aa4.99□□□□□ -1.61
PTPRN2-203ENST00000389418 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
PTPRN2-203ENST00000389418 KRTAP19-8Q3LI54 63 aa4.98□□□□□ -1.61
PTPRN2-203ENST00000389418 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.62
PTPRN2-203ENST00000389418 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
PTPRN2-203ENST00000389418 KRTAP10-7P60409 375 aaPredicted RBP4.91□□□□□ -1.62
PTPRN2-203ENST00000389418 PKHD1L1Q86WI1 4243 aa4.88□□□□□ -1.63
PTPRN2-203ENST00000389418 TNXBP22105 4242 aa4.87□□□□□ -1.63
PTPRN2-203ENST00000389418 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
PTPRN2-203ENST00000389418 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
PTPRN2-203ENST00000389418 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.63
PTPRN2-203ENST00000389418 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
PTPRN2-203ENST00000389418 KRTAP4-8Q9BYQ9 185 aa4.83□□□□□ -1.64
PTPRN2-203ENST00000389418 KRTAP19-2Q3LHN2 52 aa4.82□□□□□ -1.64
PTPRN2-203ENST00000389418 MUC2Q02817 5179 aa4.8□□□□□ -1.64
PTPRN2-203ENST00000389418 MT1BP07438 61 aa4.8□□□□□ -1.64
PTPRN2-203ENST00000389418 MT1XP80297 61 aa4.77□□□□□ -1.65
PTPRN2-203ENST00000389418 FAT4Q6V0I7 4981 aa4.75□□□□□ -1.65
PTPRN2-203ENST00000389418 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
PTPRN2-203ENST00000389418 SPRR2EP22531 72 aa4.7□□□□□ -1.66
PTPRN2-203ENST00000389418 SPRR2BP35325 72 aa4.7□□□□□ -1.66
PTPRN2-203ENST00000389418 SPRR2AP35326 72 aa4.7□□□□□ -1.66
PTPRN2-203ENST00000389418 LCE2BO14633 110 aa4.66□□□□□ -1.66
PTPRN2-203ENST00000389418 MUC17Q685J3 4493 aa4.65□□□□□ -1.67
PTPRN2-203ENST00000389418 FLGP20930 4061 aaPredicted RBP4.61□□□□□ -1.67
PTPRN2-203ENST00000389418 HMCN2Q8NDA2 5059 aa4.61□□□□□ -1.67
PTPRN2-203ENST00000389418 MT1GP13640 62 aa4.58□□□□□ -1.68
PTPRN2-203ENST00000389418 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
PTPRN2-203ENST00000389418 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
PTPRN2-203ENST00000389418 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
PTPRN2-203ENST00000389418 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
PTPRN2-203ENST00000389418 SPRR2DP22532 72 aa4.51□□□□□ -1.69
PTPRN2-203ENST00000389418 SYNE2Q8WXH0 6885 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms