RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
PTPRN2-203ENST00000389418 NISCHQ9Y2I1 1504 aa23.23■■□□□ 1.31
PTPRN2-203ENST00000389418 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.13
PTPRN2-203ENST00000389418 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
PTPRN2-203ENST00000389418 EHMT2Q96KQ7 1210 aa21.67■■□□□ 1.06
PTPRN2-203ENST00000389418 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
PTPRN2-203ENST00000389418 TTBK1Q5TCY1 1321 aaPredicted RBP20.77■□□□□ 0.92
PTPRN2-203ENST00000389418 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
PTPRN2-203ENST00000389418 APLP2Q06481 763 aa20.46■□□□□ 0.87
PTPRN2-203ENST00000389418 TRIM41Q8WV44 630 aa20.27■□□□□ 0.84
PTPRN2-203ENST00000389418 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
PTPRN2-203ENST00000389418 PCGF6Q9BYE7 350 aa20.17■□□□□ 0.82
PTPRN2-203ENST00000389418 UBTFP17480 764 aaKnown RBP20.07■□□□□ 0.8
PTPRN2-203ENST00000389418 PPARGC1BQ86YN6 1023 aaKnown RBP20.07■□□□□ 0.8
PTPRN2-203ENST00000389418 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
PTPRN2-203ENST00000389418 ABCC9O60706 1549 aa19.93■□□□□ 0.78
PTPRN2-203ENST00000389418 PELP1Q8IZL8 1130 aaKnown RBP19.85■□□□□ 0.77
PTPRN2-203ENST00000389418 LOC105371045A0A1W2PR82 267 aa19.69■□□□□ 0.74
PTPRN2-203ENST00000389418 CCER1Q8TC90 406 aaPredicted RBP19.66■□□□□ 0.74
PTPRN2-203ENST00000389418 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
PTPRN2-203ENST00000389418 ITGAEP38570 1179 aa19.58■□□□□ 0.72
PTPRN2-203ENST00000389418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
PTPRN2-203ENST00000389418 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
PTPRN2-203ENST00000389418 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
PTPRN2-203ENST00000389418 CCDC180Q9P1Z9 1646 aa19.49■□□□□ 0.71
PTPRN2-203ENST00000389418 MYT1LQ9UL68 1186 aa19.42■□□□□ 0.7
PTPRN2-203ENST00000389418 TRIM26Q12899 539 aaPredicted RBP19.32■□□□□ 0.68
PTPRN2-203ENST00000389418 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
PTPRN2-203ENST00000389418 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
PTPRN2-203ENST00000389418 CNGB1Q14028 1251 aaPredicted RBP19.23■□□□□ 0.67
PTPRN2-203ENST00000389418 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
PTPRN2-203ENST00000389418 FBLN2P98095 1184 aa19.17■□□□□ 0.66
PTPRN2-203ENST00000389418 POLR3GLQ9BT43 218 aa19.16■□□□□ 0.66
PTPRN2-203ENST00000389418 HRCP23327 699 aa19.1■□□□□ 0.65
PTPRN2-203ENST00000389418 ARID3CA6NKF2 412 aa19.05■□□□□ 0.64
PTPRN2-203ENST00000389418 SCRIBQ14160 1630 aa18.97■□□□□ 0.63
PTPRN2-203ENST00000389418 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
PTPRN2-203ENST00000389418 FAM50AQ14320 339 aaKnown RBP18.93■□□□□ 0.62
PTPRN2-203ENST00000389418 NEFLP07196 543 aa18.89■□□□□ 0.61
PTPRN2-203ENST00000389418 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
PTPRN2-203ENST00000389418 NACADO15069 1562 aa18.78■□□□□ 0.6
PTPRN2-203ENST00000389418 SLC4A1APQ9BWU0 796 aaKnown RBP18.77■□□□□ 0.59
PTPRN2-203ENST00000389418 ERICH6Q7L0X2 663 aa18.74■□□□□ 0.59
PTPRN2-203ENST00000389418 TRIM52Q96A61 297 aa18.74■□□□□ 0.59
PTPRN2-203ENST00000389418 NEUROD1Q13562 356 aa18.71■□□□□ 0.58
PTPRN2-203ENST00000389418 ZNF326Q5BKZ1 582 aaKnown RBP18.66■□□□□ 0.58
PTPRN2-203ENST00000389418 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
PTPRN2-203ENST00000389418 MYT1Q01538 1121 aa18.61■□□□□ 0.57
PTPRN2-203ENST00000389418 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
PTPRN2-203ENST00000389418 ZNF777Q9ULD5 760 aaPredicted RBP18.58■□□□□ 0.56
PTPRN2-203ENST00000389418 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
PTPRN2-203ENST00000389418 PLPPR3Q6T4P5 718 aa18.51■□□□□ 0.55
PTPRN2-203ENST00000389418 CDK11AQ9UQ88 783 aaPredicted RBP18.38■□□□□ 0.53
PTPRN2-203ENST00000389418 RSF1Q96T23 1441 aaPredicted RBP18.35■□□□□ 0.53
PTPRN2-203ENST00000389418 BCANQ96GW7 911 aa18.33■□□□□ 0.53
PTPRN2-203ENST00000389418 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
PTPRN2-203ENST00000389418 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
PTPRN2-203ENST00000389418 CHIC2Q9UKJ5 165 aa18.26■□□□□ 0.51
PTPRN2-203ENST00000389418 DAXXQ9UER7 740 aaPredicted RBP18.23■□□□□ 0.51
PTPRN2-203ENST00000389418 CHGAP10645 457 aaKnown RBP18.21■□□□□ 0.51
PTPRN2-203ENST00000389418 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
PTPRN2-203ENST00000389418 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
PTPRN2-203ENST00000389418 BCL11AQ9H165 835 aa18.17■□□□□ 0.5
PTPRN2-203ENST00000389418 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
PTPRN2-203ENST00000389418 ZNF316A6NFI3 1004 aaPredicted RBP18.17■□□□□ 0.5
PTPRN2-203ENST00000389418 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
PTPRN2-203ENST00000389418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.54e-7■■■□□ 15.2
PTPRN2-203ENST00000389418 NPM1P06748 294 aaKnown RBP eCLIP18.14■□□□□ 0.49
PTPRN2-203ENST00000389418 SLC24A1O60721 1099 aa18.12■□□□□ 0.49
PTPRN2-203ENST00000389418 KCNH8Q96L42 1107 aa18.1■□□□□ 0.49
PTPRN2-203ENST00000389418 ANP32CO43423 234 aa18.08■□□□□ 0.48
PTPRN2-203ENST00000389418 ESF1Q9H501 851 aaKnown RBP18.07■□□□□ 0.48
PTPRN2-203ENST00000389418 GTF3C3Q9Y5Q9 886 aa18.03■□□□□ 0.48
PTPRN2-203ENST00000389418 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.47
PTPRN2-203ENST00000389418 EEA1Q15075 1411 aa18■□□□□ 0.47
PTPRN2-203ENST00000389418 CLSPNQ9HAW4 1339 aa18■□□□□ 0.47
PTPRN2-203ENST00000389418 HIRIP3Q9BW71 556 aaPredicted RBP17.97■□□□□ 0.47
PTPRN2-203ENST00000389418 MROH2BQ7Z745 1585 aa17.97■□□□□ 0.47
PTPRN2-203ENST00000389418 PLEKHG5O94827 1062 aa17.95■□□□□ 0.46
PTPRN2-203ENST00000389418 KDM2AQ9Y2K7 1162 aa17.94■□□□□ 0.46
PTPRN2-203ENST00000389418 NEFMP07197 916 aa17.93■□□□□ 0.46
PTPRN2-203ENST00000389418 RRP7BPQ9NSQ0 103 aa17.92■□□□□ 0.46
PTPRN2-203ENST00000389418 MTUS2Q5JR59 1369 aa17.91■□□□□ 0.46
PTPRN2-203ENST00000389418 SALL2Q9Y467 1007 aaPredicted RBP17.89■□□□□ 0.45
PTPRN2-203ENST00000389418 CLIP1P30622 1438 aa17.88■□□□□ 0.45
PTPRN2-203ENST00000389418 TSPY4P0CV99 314 aa17.87■□□□□ 0.45
PTPRN2-203ENST00000389418 TSPY10P0CW01 314 aa17.87■□□□□ 0.45
PTPRN2-203ENST00000389418 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
PTPRN2-203ENST00000389418 TONSLQ96HA7 1378 aa17.86■□□□□ 0.45
PTPRN2-203ENST00000389418 DDX10Q13206 875 aaKnown RBP17.85■□□□□ 0.45
PTPRN2-203ENST00000389418 WRNQ14191 1432 aaPredicted RBP eCLIP17.85■□□□□ 0.45
PTPRN2-203ENST00000389418 SMARCA2P51531 1590 aa17.83■□□□□ 0.44
PTPRN2-203ENST00000389418 ZBTB47Q9UFB7 747 aaPredicted RBP17.82■□□□□ 0.44
PTPRN2-203ENST00000389418 SENP3-EIF4A1A0A087X0R7 540 aa17.8■□□□□ 0.44
PTPRN2-203ENST00000389418 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
PTPRN2-203ENST00000389418 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
PTPRN2-203ENST00000389418 RGL3Q3MIN7 710 aa17.77■□□□□ 0.44
PTPRN2-203ENST00000389418 CEP162Q5TB80 1403 aa17.77■□□□□ 0.44
PTPRN2-203ENST00000389418 GOLGA3Q08378 1498 aa17.77■□□□□ 0.43
PTPRN2-203ENST00000389418 PLEKHD1A6NEE1 506 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms