RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
SGCB-201ENST00000381431 DNAH5Q8TE73 4624 aa7.86□□□□□ -1.15
SGCB-201ENST00000381431 DNAH9Q9NYC9 4486 aa7.85□□□□□ -1.15
SGCB-201ENST00000381431 DNAH11Q96DT5 4516 aa7.84□□□□□ -1.15
SGCB-201ENST00000381431 PLECQ15149 4684 aaKnown RBP7.8□□□□□ -1.16
SGCB-201ENST00000381431 ALMS1Q8TCU4 4167 aa7.79□□□□□ -1.16
SGCB-201ENST00000381431 FRAS1Q86XX4 4008 aa7.73□□□□□ -1.17
SGCB-201ENST00000381431 DNAH1Q9P2D7 4330 aa7.72□□□□□ -1.17
SGCB-201ENST00000381431 PRKDCP78527 4128 aaKnown RBP7.69□□□□□ -1.18
SGCB-201ENST00000381431 FAT1Q14517 4588 aa7.67□□□□□ -1.18
SGCB-201ENST00000381431 DNAH8Q96JB1 4490 aa7.65□□□□□ -1.18
SGCB-201ENST00000381431 KRTAP15-1Q3LI76 137 aa7.63□□□□□ -1.19
SGCB-201ENST00000381431 LORP23490 312 aaPredicted RBP7.62□□□□□ -1.19
SGCB-201ENST00000381431 DNAH7Q8WXX0 4024 aa7.59□□□□□ -1.19
SGCB-201ENST00000381431 DNAH17Q9UFH2 4485 aa7.53□□□□□ -1.2
SGCB-201ENST00000381431 STARD9Q9P2P6 4700 aa7.5□□□□□ -1.21
SGCB-201ENST00000381431 DYNC1H1Q14204 4646 aaKnown RBP7.48□□□□□ -1.21
SGCB-201ENST00000381431 RYR1P21817 5038 aa7.48□□□□□ -1.21
SGCB-201ENST00000381431 LRP1BQ9NZR2 4599 aa7.48□□□□□ -1.21
SGCB-201ENST00000381431 VPS13DQ5THJ4 4388 aa7.46□□□□□ -1.21
SGCB-201ENST00000381431 DYNC2H1Q8NCM8 4307 aaKnown RBP7.43□□□□□ -1.22
SGCB-201ENST00000381431 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
SGCB-201ENST00000381431 KRTAP10-12P60413 245 aa7.39□□□□□ -1.23
SGCB-201ENST00000381431 DNAH2Q9P225 4427 aa7.36□□□□□ -1.23
SGCB-201ENST00000381431 KMT2AQ03164 3969 aa7.36□□□□□ -1.23
SGCB-201ENST00000381431 KRTAP4-1Q9BYQ7 146 aa7.34□□□□□ -1.23
SGCB-201ENST00000381431 HECTD4Q9Y4D8 3996 aa7.34□□□□□ -1.23
SGCB-201ENST00000381431 KIAA1109Q2LD37 5005 aa7.32□□□□□ -1.24
SGCB-201ENST00000381431 SACSQ9NZJ4 4579 aa7.28□□□□□ -1.24
SGCB-201ENST00000381431 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
SGCB-201ENST00000381431 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
SGCB-201ENST00000381431 DNAH6Q9C0G6 4158 aa7.26□□□□□ -1.25
SGCB-201ENST00000381431 HYDINQ4G0P3 5121 aa7.24□□□□□ -1.25
SGCB-201ENST00000381431 APOBP04114 4563 aaKnown RBP7.15□□□□□ -1.27
SGCB-201ENST00000381431 VPS13BQ7Z7G8 4022 aa7.15□□□□□ -1.27
SGCB-201ENST00000381431 FAT3Q8TDW7 4589 aa7.15□□□□□ -1.27
SGCB-201ENST00000381431 CRCT1Q9UGL9 99 aa7.13□□□□□ -1.27
SGCB-201ENST00000381431 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
SGCB-201ENST00000381431 KMT2CQ8NEZ4 4911 aaKnown RBP7.09□□□□□ -1.27
SGCB-201ENST00000381431 LRP1Q07954 4544 aaKnown RBP7.07□□□□□ -1.28
SGCB-201ENST00000381431 RYR3Q15413 4870 aa7.06□□□□□ -1.28
SGCB-201ENST00000381431 FAT2Q9NYQ8 4349 aa7.06□□□□□ -1.28
SGCB-201ENST00000381431 INE1O15225 51 aa7□□□□□ -1.29
SGCB-201ENST00000381431 PKD1P98161 4303 aa6.99□□□□□ -1.29
SGCB-201ENST00000381431 PKHD1P08F94 4074 aa6.98□□□□□ -1.29
SGCB-201ENST00000381431 KRTAP17-1Q9BYP8 105 aa6.96□□□□□ -1.29
SGCB-201ENST00000381431 RYR2Q92736 4967 aa6.95□□□□□ -1.3
SGCB-201ENST00000381431 MT1HP80294 61 aa6.95□□□□□ -1.3
SGCB-201ENST00000381431 MT2AP02795 61 aa6.92□□□□□ -1.3
SGCB-201ENST00000381431 SPRR2GQ9BYE4 73 aa6.86□□□□□ -1.31
SGCB-201ENST00000381431 LRP2P98164 4655 aa6.84□□□□□ -1.31
SGCB-201ENST00000381431 MT1FP04733 61 aa6.83□□□□□ -1.32
SGCB-201ENST00000381431 HERC2O95714 4834 aa6.71□□□□□ -1.34
SGCB-201ENST00000381431 KRTAP8-1Q8IUC2 63 aa6.71□□□□□ -1.34
SGCB-201ENST00000381431 EPPK1P58107 5090 aaKnown RBP6.67□□□□□ -1.34
SGCB-201ENST00000381431 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
SGCB-201ENST00000381431 KRTAP19-1Q8IUB9 90 aa6.61□□□□□ -1.35
SGCB-201ENST00000381431 HSPG2P98160 4391 aa6.61□□□□□ -1.35
SGCB-201ENST00000381431 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
SGCB-201ENST00000381431 PKHD1L1Q86WI1 4243 aa6.44□□□□□ -1.38
SGCB-201ENST00000381431 KRTAP10-7P60409 375 aaPredicted RBP6.43□□□□□ -1.38
SGCB-201ENST00000381431 PCLOQ9Y6V0 5065 aa6.43□□□□□ -1.38
SGCB-201ENST00000381431 LPAP08519 4548 aa6.42□□□□□ -1.38
SGCB-201ENST00000381431 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.39
SGCB-201ENST00000381431 LCE3CQ5T5A8 94 aa6.39□□□□□ -1.39
SGCB-201ENST00000381431 TNXBP22105 4242 aa6.33□□□□□ -1.4
SGCB-201ENST00000381431 MT1XP80297 61 aa6.33□□□□□ -1.4
SGCB-201ENST00000381431 MUC2Q02817 5179 aa6.31□□□□□ -1.4
SGCB-201ENST00000381431 MT1BP07438 61 aa6.3□□□□□ -1.4
SGCB-201ENST00000381431 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
SGCB-201ENST00000381431 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
SGCB-201ENST00000381431 SPRR2FQ96RM1 72 aa6.29□□□□□ -1.4
SGCB-201ENST00000381431 ABCA13Q86UQ4 5058 aa6.28□□□□□ -1.4
SGCB-201ENST00000381431 OBSCNQ5VST9 7968 aa6.28□□□□□ -1.4
SGCB-201ENST00000381431 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
SGCB-201ENST00000381431 HERC1Q15751 4861 aa6.25□□□□□ -1.41
SGCB-201ENST00000381431 SYNE1Q8NF91 8797 aaKnown RBP6.24□□□□□ -1.41
SGCB-201ENST00000381431 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
SGCB-201ENST00000381431 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
SGCB-201ENST00000381431 KRTAP19-2Q3LHN2 52 aa6.11□□□□□ -1.43
SGCB-201ENST00000381431 FSIP2Q5CZC0 6907 aa6.11□□□□□ -1.43
SGCB-201ENST00000381431 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
SGCB-201ENST00000381431 MUC17Q685J3 4493 aa6.09□□□□□ -1.43
SGCB-201ENST00000381431 UBR4Q5T4S7 5183 aa6.09□□□□□ -1.44
SGCB-201ENST00000381431 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
SGCB-201ENST00000381431 FAT4Q6V0I7 4981 aa6.05□□□□□ -1.44
SGCB-201ENST00000381431 RNF213Q63HN8 5207 aa6.05□□□□□ -1.44
SGCB-201ENST00000381431 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
SGCB-201ENST00000381431 MT1GP13640 62 aa5.94□□□□□ -1.46
SGCB-201ENST00000381431 LCE2BO14633 110 aa5.9□□□□□ -1.47
SGCB-201ENST00000381431 FLGP20930 4061 aaPredicted RBP5.9□□□□□ -1.47
SGCB-201ENST00000381431 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
SGCB-201ENST00000381431 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
SGCB-201ENST00000381431 HMCN2Q8NDA2 5059 aa5.81□□□□□ -1.48
SGCB-201ENST00000381431 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
SGCB-201ENST00000381431 SPRR2EP22531 72 aa5.74□□□□□ -1.49
SGCB-201ENST00000381431 SPRR2BP35325 72 aa5.74□□□□□ -1.49
SGCB-201ENST00000381431 SPRR2AP35326 72 aa5.74□□□□□ -1.49
SGCB-201ENST00000381431 MT1LQ93083 61 aa5.68□□□□□ -1.5
SGCB-201ENST00000381431 MT1EP04732 61 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms