RNA–Protein interactions for RNA: ENST00000379540.7

NFX1-203, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFX1, Length 4,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-203ENST00000379540 HECTD4Q9Y4D8 3996 aa3.88□□□□□ -1.79
NFX1-203ENST00000379540 A0A1B0GVY2 172 aa3.88□□□□□ -1.79
NFX1-203ENST00000379540 DNAH8Q96JB1 4490 aa3.87□□□□□ -1.79
NFX1-203ENST00000379540 KMT2AQ03164 3969 aa3.87□□□□□ -1.79
NFX1-203ENST00000379540 DNAH11Q96DT5 4516 aa3.85□□□□□ -1.79
NFX1-203ENST00000379540 DNAH5Q8TE73 4624 aa3.84□□□□□ -1.8
NFX1-203ENST00000379540 H0YAA0 97 aa3.82□□□□□ -1.8
NFX1-203ENST00000379540 P0C880 135 aa3.82□□□□□ -1.8
NFX1-203ENST00000379540 FRAS1Q86XX4 4008 aa3.79□□□□□ -1.8
NFX1-203ENST00000379540 FAT2Q9NYQ8 4349 aa3.77□□□□□ -1.81
NFX1-203ENST00000379540 LRP1BQ9NZR2 4599 aa3.76□□□□□ -1.81
NFX1-203ENST00000379540 PKD1P98161 4303 aa3.76□□□□□ -1.81
NFX1-203ENST00000379540 SACSQ9NZJ4 4579 aa3.75□□□□□ -1.81
NFX1-203ENST00000379540 HYDINQ4G0P3 5121 aa3.74□□□□□ -1.81
NFX1-203ENST00000379540 KRTAP10-4P60372 401 aaPredicted RBP3.72□□□□□ -1.81
NFX1-203ENST00000379540 DYNC1H1Q14204 4646 aaKnown RBP3.72□□□□□ -1.81
NFX1-203ENST00000379540 VPS13BQ7Z7G8 4022 aa3.69□□□□□ -1.82
NFX1-203ENST00000379540 KRTAP13-4Q3LI77 160 aa3.68□□□□□ -1.82
NFX1-203ENST00000379540 APOBP04114 4563 aaKnown RBP3.65□□□□□ -1.83
NFX1-203ENST00000379540 RYR2Q92736 4967 aa3.64□□□□□ -1.83
NFX1-203ENST00000379540 PKHD1P08F94 4074 aa3.63□□□□□ -1.83
NFX1-203ENST00000379540 FAT1Q14517 4588 aa3.61□□□□□ -1.83
NFX1-203ENST00000379540 PKHD1L1Q86WI1 4243 aa3.58□□□□□ -1.84
NFX1-203ENST00000379540 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
NFX1-203ENST00000379540 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
NFX1-203ENST00000379540 KMT2CQ8NEZ4 4911 aaKnown RBP3.52□□□□□ -1.85
NFX1-203ENST00000379540 MT1HL1P0DM35 61 aa3.51□□□□□ -1.85
NFX1-203ENST00000379540 KRTAP3-1Q9BYR8 98 aa3.51□□□□□ -1.85
NFX1-203ENST00000379540 RYR1P21817 5038 aa3.5□□□□□ -1.85
NFX1-203ENST00000379540 HSPG2P98160 4391 aa3.5□□□□□ -1.85
NFX1-203ENST00000379540 FAT3Q8TDW7 4589 aa3.48□□□□□ -1.85
NFX1-203ENST00000379540 KRTAP15-1Q3LI76 137 aa3.48□□□□□ -1.85
NFX1-203ENST00000379540 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
NFX1-203ENST00000379540 TNXBP22105 4242 aa3.45□□□□□ -1.86
NFX1-203ENST00000379540 KRTAP10-6P60371 365 aaPredicted RBP3.45□□□□□ -1.86
NFX1-203ENST00000379540 RYR3Q15413 4870 aa3.44□□□□□ -1.86
NFX1-203ENST00000379540 LRP1Q07954 4544 aaKnown RBP3.43□□□□□ -1.86
NFX1-203ENST00000379540 KRTAP17-1Q9BYP8 105 aa3.42□□□□□ -1.86
NFX1-203ENST00000379540 KIAA1109Q2LD37 5005 aa3.41□□□□□ -1.86
NFX1-203ENST00000379540 INE1O15225 51 aa3.37□□□□□ -1.87
NFX1-203ENST00000379540 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
NFX1-203ENST00000379540 KRTAP3-3Q9BYR6 98 aa3.36□□□□□ -1.87
NFX1-203ENST00000379540 KRTAP4-5Q9BYR2 181 aa3.35□□□□□ -1.87
NFX1-203ENST00000379540 MYCBP2O75592 4640 aa3.32□□□□□ -1.88
NFX1-203ENST00000379540 KRTAP3-2Q9BYR7 98 aa3.31□□□□□ -1.88
NFX1-203ENST00000379540 EPPK1P58107 5090 aaKnown RBP3.3□□□□□ -1.88
NFX1-203ENST00000379540 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
NFX1-203ENST00000379540 LRP2P98164 4655 aa3.23□□□□□ -1.89
NFX1-203ENST00000379540 BIRC6Q9NR09 4857 aa3.22□□□□□ -1.89
NFX1-203ENST00000379540 KRTAP19-4Q3LI73 84 aa3.21□□□□□ -1.9
NFX1-203ENST00000379540 HERC2O95714 4834 aa3.2□□□□□ -1.9
NFX1-203ENST00000379540 ABCA13Q86UQ4 5058 aa3.18□□□□□ -1.9
NFX1-203ENST00000379540 KRTAP4-1Q9BYQ7 146 aa3.17□□□□□ -1.9
NFX1-203ENST00000379540 LPAP08519 4548 aa3.16□□□□□ -1.9
NFX1-203ENST00000379540 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.91
NFX1-203ENST00000379540 MUC17Q685J3 4493 aa3.14□□□□□ -1.91
NFX1-203ENST00000379540 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
NFX1-203ENST00000379540 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
NFX1-203ENST00000379540 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
NFX1-203ENST00000379540 SPRR2GQ9BYE4 73 aa3.06□□□□□ -1.92
NFX1-203ENST00000379540 HERC1Q15751 4861 aa3.06□□□□□ -1.92
NFX1-203ENST00000379540 LORP23490 312 aaPredicted RBP3.04□□□□□ -1.92
NFX1-203ENST00000379540 MT1HP80294 61 aa3.03□□□□□ -1.92
NFX1-203ENST00000379540 FLGP20930 4061 aaPredicted RBP3.01□□□□□ -1.93
NFX1-203ENST00000379540 HMCN2Q8NDA2 5059 aa3□□□□□ -1.93
NFX1-203ENST00000379540 MT2AP02795 61 aa3□□□□□ -1.93
NFX1-203ENST00000379540 PCLOQ9Y6V0 5065 aa3□□□□□ -1.93
NFX1-203ENST00000379540 LCE2CQ5TA81 110 aa2.97□□□□□ -1.93
NFX1-203ENST00000379540 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
NFX1-203ENST00000379540 KRTAP10-5P60370 271 aa2.95□□□□□ -1.94
NFX1-203ENST00000379540 MT1FP04733 61 aa2.88□□□□□ -1.95
NFX1-203ENST00000379540 KRTAP19-8Q3LI54 63 aa2.88□□□□□ -1.95
NFX1-203ENST00000379540 SPRR2FQ96RM1 72 aa2.88□□□□□ -1.95
NFX1-203ENST00000379540 KRTAP19-1Q8IUB9 90 aa2.86□□□□□ -1.95
NFX1-203ENST00000379540 RNF213Q63HN8 5207 aa2.84□□□□□ -1.95
NFX1-203ENST00000379540 KRTAP9-8Q9BYQ0 159 aa2.84□□□□□ -1.95
NFX1-203ENST00000379540 MUC2Q02817 5179 aa2.84□□□□□ -1.96
NFX1-203ENST00000379540 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
NFX1-203ENST00000379540 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
NFX1-203ENST00000379540 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
NFX1-203ENST00000379540 UBR4Q5T4S7 5183 aa2.76□□□□□ -1.97
NFX1-203ENST00000379540 MT1BP07438 61 aa2.74□□□□□ -1.97
NFX1-203ENST00000379540 KRTAP9-3Q9BYQ3 159 aa2.74□□□□□ -1.97
NFX1-203ENST00000379540 SPRR2EP22531 72 aa2.72□□□□□ -1.97
NFX1-203ENST00000379540 SPRR2BP35325 72 aa2.72□□□□□ -1.97
NFX1-203ENST00000379540 SPRR2AP35326 72 aa2.72□□□□□ -1.97
NFX1-203ENST00000379540 MT1GP13640 62 aa2.71□□□□□ -1.98
NFX1-203ENST00000379540 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
NFX1-203ENST00000379540 MT1XP80297 61 aa2.7□□□□□ -1.98
NFX1-203ENST00000379540 LCE2BO14633 110 aa2.67□□□□□ -1.98
NFX1-203ENST00000379540 LCE2AQ5TA79 106 aaPredicted RBP2.67□□□□□ -1.98
NFX1-203ENST00000379540 SPRR2DP22532 72 aa2.66□□□□□ -1.98
NFX1-203ENST00000379540 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
NFX1-203ENST00000379540 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
NFX1-203ENST00000379540 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
NFX1-203ENST00000379540 MT1LQ93083 61 aa2.53□□□□□ -2
NFX1-203ENST00000379540 LCE3BQ5TA77 95 aa2.51□□□□□ -2.01
NFX1-203ENST00000379540 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
NFX1-203ENST00000379540 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
NFX1-203ENST00000379540 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms