RNA–Protein interactions for RNA: ENST00000378251.2

LRRC47-201, Transcript of leucine rich repeat containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC47, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-201ENST00000378251 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
LRRC47-201ENST00000378251 LRP1BQ9NZR2 4599 aa7.9□□□□□ -1.15
LRRC47-201ENST00000378251 KMT2AQ03164 3969 aa7.9□□□□□ -1.15
LRRC47-201ENST00000378251 ALMS1Q8TCU4 4167 aa7.89□□□□□ -1.15
LRRC47-201ENST00000378251 LYSTQ99698 3801 aa7.86□□□□□ -1.15
LRRC47-201ENST00000378251 RYR3Q15413 4870 aa7.79□□□□□ -1.16
LRRC47-201ENST00000378251 DNAH17Q9UFH2 4485 aa7.78□□□□□ -1.16
LRRC47-201ENST00000378251 TNP1P09430 55 aa7.74□□□□□ -1.17
LRRC47-201ENST00000378251 DNAH2Q9P225 4427 aa7.73□□□□□ -1.17
LRRC47-201ENST00000378251 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
LRRC47-201ENST00000378251 DNAH8Q96JB1 4490 aa7.69□□□□□ -1.18
LRRC47-201ENST00000378251 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
LRRC47-201ENST00000378251 SACSQ9NZJ4 4579 aa7.65□□□□□ -1.18
LRRC47-201ENST00000378251 MYCBP2O75592 4640 aa7.64□□□□□ -1.19
LRRC47-201ENST00000378251 HYDINQ4G0P3 5121 aa7.63□□□□□ -1.19
LRRC47-201ENST00000378251 DNAH3Q8TD57 4116 aa7.63□□□□□ -1.19
LRRC47-201ENST00000378251 CMYA5Q8N3K9 4069 aa7.63□□□□□ -1.19
LRRC47-201ENST00000378251 DYNC2H1Q8NCM8 4307 aaKnown RBP7.59□□□□□ -1.2
LRRC47-201ENST00000378251 KRTAP17-1Q9BYP8 105 aa7.57□□□□□ -1.2
LRRC47-201ENST00000378251 VPS13BQ7Z7G8 4022 aa7.57□□□□□ -1.2
LRRC47-201ENST00000378251 FAT2Q9NYQ8 4349 aa7.56□□□□□ -1.2
LRRC47-201ENST00000378251 KRTAP12-1P59990 96 aa7.56□□□□□ -1.2
LRRC47-201ENST00000378251 FAT3Q8TDW7 4589 aa7.55□□□□□ -1.2
LRRC47-201ENST00000378251 APOBP04114 4563 aaKnown RBP7.55□□□□□ -1.2
LRRC47-201ENST00000378251 KRTAP13-4Q3LI77 160 aa7.55□□□□□ -1.2
LRRC47-201ENST00000378251 LRP1Q07954 4544 aaKnown RBP7.54□□□□□ -1.2
LRRC47-201ENST00000378251 KRTAP10-6P60371 365 aaPredicted RBP7.52□□□□□ -1.21
LRRC47-201ENST00000378251 KMT2CQ8NEZ4 4911 aaKnown RBP7.52□□□□□ -1.21
LRRC47-201ENST00000378251 RYR2Q92736 4967 aa7.49□□□□□ -1.21
LRRC47-201ENST00000378251 DNAH7Q8WXX0 4024 aa7.49□□□□□ -1.21
LRRC47-201ENST00000378251 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
LRRC47-201ENST00000378251 PRO2289Q9P1D8 64 aa7.47□□□□□ -1.21
LRRC47-201ENST00000378251 DNAH6Q9C0G6 4158 aa7.46□□□□□ -1.22
LRRC47-201ENST00000378251 HERC2O95714 4834 aa7.44□□□□□ -1.22
LRRC47-201ENST00000378251 KRTAP4-1Q9BYQ7 146 aa7.39□□□□□ -1.23
LRRC47-201ENST00000378251 PKHD1P08F94 4074 aa7.39□□□□□ -1.23
LRRC47-201ENST00000378251 KRTAP15-1Q3LI76 137 aa7.38□□□□□ -1.23
LRRC47-201ENST00000378251 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
LRRC47-201ENST00000378251 FRAS1Q86XX4 4008 aa7.25□□□□□ -1.25
LRRC47-201ENST00000378251 HECTD4Q9Y4D8 3996 aa7.23□□□□□ -1.25
LRRC47-201ENST00000378251 LRP2P98164 4655 aa7.21□□□□□ -1.26
LRRC47-201ENST00000378251 BIRC6Q9NR09 4857 aa7.21□□□□□ -1.26
LRRC47-201ENST00000378251 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
LRRC47-201ENST00000378251 EPPK1P58107 5090 aaKnown RBP7.13□□□□□ -1.27
LRRC47-201ENST00000378251 HSPG2P98160 4391 aa7.11□□□□□ -1.27
LRRC47-201ENST00000378251 MT1HP80294 61 aa7.03□□□□□ -1.28
LRRC47-201ENST00000378251 PCLOQ9Y6V0 5065 aa6.99□□□□□ -1.29
LRRC47-201ENST00000378251 PKD1P98161 4303 aa6.98□□□□□ -1.29
LRRC47-201ENST00000378251 ABCA13Q86UQ4 5058 aa6.94□□□□□ -1.3
LRRC47-201ENST00000378251 MT2AP02795 61 aa6.88□□□□□ -1.31
LRRC47-201ENST00000378251 LPAP08519 4548 aa6.83□□□□□ -1.32
LRRC47-201ENST00000378251 MT1FP04733 61 aa6.8□□□□□ -1.32
LRRC47-201ENST00000378251 HERC1Q15751 4861 aa6.8□□□□□ -1.32
LRRC47-201ENST00000378251 KRTAP10-12P60413 245 aa6.8□□□□□ -1.32
LRRC47-201ENST00000378251 INE1O15225 51 aa6.7□□□□□ -1.34
LRRC47-201ENST00000378251 SPRR2GQ9BYE4 73 aa6.63□□□□□ -1.35
LRRC47-201ENST00000378251 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
LRRC47-201ENST00000378251 RNF213Q63HN8 5207 aa6.59□□□□□ -1.36
LRRC47-201ENST00000378251 FSIP2Q5CZC0 6907 aa6.57□□□□□ -1.36
LRRC47-201ENST00000378251 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
LRRC47-201ENST00000378251 UBR4Q5T4S7 5183 aa6.56□□□□□ -1.36
LRRC47-201ENST00000378251 LCE2CQ5TA81 110 aa6.55□□□□□ -1.36
LRRC47-201ENST00000378251 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
LRRC47-201ENST00000378251 CRCT1Q9UGL9 99 aa6.51□□□□□ -1.37
LRRC47-201ENST00000378251 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
LRRC47-201ENST00000378251 PKHD1L1Q86WI1 4243 aa6.49□□□□□ -1.37
LRRC47-201ENST00000378251 TNXBP22105 4242 aa6.48□□□□□ -1.37
LRRC47-201ENST00000378251 KRTAP8-1Q8IUC2 63 aa6.46□□□□□ -1.37
LRRC47-201ENST00000378251 KRTAP9-8Q9BYQ0 159 aa6.44□□□□□ -1.38
LRRC47-201ENST00000378251 MUC2Q02817 5179 aa6.43□□□□□ -1.38
LRRC47-201ENST00000378251 KRTAP19-2Q3LHN2 52 aa6.39□□□□□ -1.39
LRRC47-201ENST00000378251 FAT4Q6V0I7 4981 aa6.34□□□□□ -1.39
LRRC47-201ENST00000378251 KRTAP19-8Q3LI54 63 aa6.28□□□□□ -1.4
LRRC47-201ENST00000378251 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
LRRC47-201ENST00000378251 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
LRRC47-201ENST00000378251 MT1BP07438 61 aa6.24□□□□□ -1.41
LRRC47-201ENST00000378251 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
LRRC47-201ENST00000378251 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
LRRC47-201ENST00000378251 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
LRRC47-201ENST00000378251 MT1XP80297 61 aa6.14□□□□□ -1.43
LRRC47-201ENST00000378251 FLGP20930 4061 aaPredicted RBP6.14□□□□□ -1.43
LRRC47-201ENST00000378251 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
LRRC47-201ENST00000378251 LCE2BO14633 110 aa6.11□□□□□ -1.43
LRRC47-201ENST00000378251 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
LRRC47-201ENST00000378251 KRTAP4-8A0A0G2JLE6 195 aa6.04□□□□□ -1.44
LRRC47-201ENST00000378251 KRTAP4-8Q9BYQ9 185 aa6.04□□□□□ -1.44
LRRC47-201ENST00000378251 LCE2AQ5TA79 106 aaPredicted RBP5.98□□□□□ -1.45
LRRC47-201ENST00000378251 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
LRRC47-201ENST00000378251 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
LRRC47-201ENST00000378251 KRTAP9-2Q9BYQ4 174 aa5.83□□□□□ -1.48
LRRC47-201ENST00000378251 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
LRRC47-201ENST00000378251 SPRR2EP22531 72 aa5.75□□□□□ -1.49
LRRC47-201ENST00000378251 SPRR2BP35325 72 aa5.75□□□□□ -1.49
LRRC47-201ENST00000378251 SPRR2AP35326 72 aa5.75□□□□□ -1.49
LRRC47-201ENST00000378251 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
LRRC47-201ENST00000378251 USH2AO75445 5202 aa5.65□□□□□ -1.5
LRRC47-201ENST00000378251 KRTAP19-6Q3LI70 58 aa5.63□□□□□ -1.51
LRRC47-201ENST00000378251 MT1GP13640 62 aa5.57□□□□□ -1.52
LRRC47-201ENST00000378251 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
LRRC47-201ENST00000378251 LCE2DQ5TA82 110 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms