RNA–Protein interactions for RNA: ENST00000378251.2

LRRC47-201, Transcript of leucine rich repeat containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC47, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-201ENST00000378251 NISCHQ9Y2I1 1504 aa30.38■■■□□ 2.45
LRRC47-201ENST00000378251 DCAF8L2P0C7V8 631 aa29.76■■■□□ 2.36
LRRC47-201ENST00000378251 SHROOM4Q9ULL8 1493 aa28.03■■■□□ 2.08
LRRC47-201ENST00000378251 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
LRRC47-201ENST00000378251 EHMT2Q96KQ7 1210 aa26.64■■□□□ 1.85
LRRC47-201ENST00000378251 ABCC9O60706 1549 aa26.36■■□□□ 1.81
LRRC47-201ENST00000378251 FAM9AQ8IZU1 332 aaPredicted RBP26.18■■□□□ 1.78
LRRC47-201ENST00000378251 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.74
LRRC47-201ENST00000378251 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
LRRC47-201ENST00000378251 RANGAP1P46060 587 aaPredicted RBP25.63■■□□□ 1.69
LRRC47-201ENST00000378251 TTBK1Q5TCY1 1321 aaPredicted RBP25.51■■□□□ 1.67
LRRC47-201ENST00000378251 APLP2Q06481 763 aa25.38■■□□□ 1.65
LRRC47-201ENST00000378251 UBTFP17480 764 aaKnown RBP25.28■■□□□ 1.64
LRRC47-201ENST00000378251 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
LRRC47-201ENST00000378251 ATP1B4Q9UN42 357 aaPredicted RBP25.14■■□□□ 1.62
LRRC47-201ENST00000378251 CCDC180Q9P1Z9 1646 aa25.14■■□□□ 1.61
LRRC47-201ENST00000378251 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
LRRC47-201ENST00000378251 PCGF6Q9BYE7 350 aa25.04■■□□□ 1.6
LRRC47-201ENST00000378251 LOC105371045A0A1W2PR82 267 aa24.98■■□□□ 1.59
LRRC47-201ENST00000378251 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
LRRC47-201ENST00000378251 PPARGC1BQ86YN6 1023 aaKnown RBP24.93■■□□□ 1.58
LRRC47-201ENST00000378251 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
LRRC47-201ENST00000378251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.45■■□□□ 1.5
LRRC47-201ENST00000378251 HNRNPUL2Q1KMD3 747 aaKnown RBP24.45■■□□□ 1.5
LRRC47-201ENST00000378251 CCER1Q8TC90 406 aaPredicted RBP24.38■■□□□ 1.49
LRRC47-201ENST00000378251 NACADO15069 1562 aa24.36■■□□□ 1.49
LRRC47-201ENST00000378251 ITGAEP38570 1179 aa24.32■■□□□ 1.48
LRRC47-201ENST00000378251 FBLN2P98095 1184 aa24.28■■□□□ 1.48
LRRC47-201ENST00000378251 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
LRRC47-201ENST00000378251 TRIM26Q12899 539 aaPredicted RBP24.12■■□□□ 1.45
LRRC47-201ENST00000378251 PELP1Q8IZL8 1130 aaKnown RBP24.11■■□□□ 1.45
LRRC47-201ENST00000378251 CSRNP3Q8WYN3 585 aa24.08■■□□□ 1.44
LRRC47-201ENST00000378251 CECR2Q9BXF3 1484 aa24.06■■□□□ 1.44
LRRC47-201ENST00000378251 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
LRRC47-201ENST00000378251 MYT1LQ9UL68 1186 aa24.03■■□□□ 1.44
LRRC47-201ENST00000378251 P3H3Q8IVL6 736 aa24.02■■□□□ 1.44
LRRC47-201ENST00000378251 ARID3CA6NKF2 412 aa23.91■■□□□ 1.42
LRRC47-201ENST00000378251 ZEB1P37275 1124 aaPredicted RBP23.86■■□□□ 1.41
LRRC47-201ENST00000378251 BAZ1BQ9UIG0 1483 aaKnown RBP23.8■■□□□ 1.4
LRRC47-201ENST00000378251 HRCP23327 699 aa23.78■■□□□ 1.4
LRRC47-201ENST00000378251 FAM50AQ14320 339 aaKnown RBP23.78■■□□□ 1.4
LRRC47-201ENST00000378251 BAZ1AQ9NRL2 1556 aaPredicted RBP23.7■■□□□ 1.38
LRRC47-201ENST00000378251 MROH2BQ7Z745 1585 aa23.65■■□□□ 1.38
LRRC47-201ENST00000378251 MYT1Q01538 1121 aa23.56■■□□□ 1.36
LRRC47-201ENST00000378251 CENPBP07199 599 aaPredicted RBP23.55■■□□□ 1.36
LRRC47-201ENST00000378251 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
LRRC47-201ENST00000378251 WRNQ14191 1432 aaPredicted RBP eCLIP23.48■■□□□ 1.35
LRRC47-201ENST00000378251 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.35
LRRC47-201ENST00000378251 TRIM52Q96A61 297 aa23.45■■□□□ 1.34
LRRC47-201ENST00000378251 POLR3GLQ9BT43 218 aa23.43■■□□□ 1.34
LRRC47-201ENST00000378251 ZNF777Q9ULD5 760 aaPredicted RBP23.39■■□□□ 1.33
LRRC47-201ENST00000378251 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
LRRC47-201ENST00000378251 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.33
LRRC47-201ENST00000378251 YTHDC1Q96MU7 727 aaKnown RBP23.32■■□□□ 1.32
LRRC47-201ENST00000378251 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
LRRC47-201ENST00000378251 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
LRRC47-201ENST00000378251 WIZO95785 1651 aa23.26■■□□□ 1.31
LRRC47-201ENST00000378251 CDK11AQ9UQ88 783 aaPredicted RBP23.24■■□□□ 1.31
LRRC47-201ENST00000378251 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
LRRC47-201ENST00000378251 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
LRRC47-201ENST00000378251 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
LRRC47-201ENST00000378251 CLIP1P30622 1438 aa23.15■■□□□ 1.3
LRRC47-201ENST00000378251 SOGA1O94964 1423 aa23.13■■□□□ 1.29
LRRC47-201ENST00000378251 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
LRRC47-201ENST00000378251 ZNF326Q5BKZ1 582 aaKnown RBP23.12■■□□□ 1.29
LRRC47-201ENST00000378251 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
LRRC47-201ENST00000378251 EEA1Q15075 1411 aa23.06■■□□□ 1.28
LRRC47-201ENST00000378251 CHIC2Q9UKJ5 165 aa23.06■■□□□ 1.28
LRRC47-201ENST00000378251 CUX2O14529 1486 aa23.03■■□□□ 1.28
LRRC47-201ENST00000378251 SMARCA4P51532 1647 aa23.02■■□□□ 1.28
LRRC47-201ENST00000378251 CADPSQ9ULU8 1353 aa23.01■■□□□ 1.27
LRRC47-201ENST00000378251 CEP162Q5TB80 1403 aa23.01■■□□□ 1.27
LRRC47-201ENST00000378251 GOLGA3Q08378 1498 aa23.01■■□□□ 1.27
LRRC47-201ENST00000378251 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
LRRC47-201ENST00000378251 KCNH8Q96L42 1107 aa22.99■■□□□ 1.27
LRRC47-201ENST00000378251 TOP2AP11388 1531 aaKnown RBP22.99■■□□□ 1.27
LRRC47-201ENST00000378251 MTUS2Q5JR59 1369 aa22.99■■□□□ 1.27
LRRC47-201ENST00000378251 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
LRRC47-201ENST00000378251 SLC4A1APQ9BWU0 796 aaKnown RBP22.96■■□□□ 1.27
LRRC47-201ENST00000378251 CARMIL1Q5VZK9 1371 aa22.93■■□□□ 1.26
LRRC47-201ENST00000378251 CEP164Q9UPV0 1460 aa22.89■■□□□ 1.26
LRRC47-201ENST00000378251 TNIKQ9UKE5 1360 aa22.87■■□□□ 1.25
LRRC47-201ENST00000378251 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
LRRC47-201ENST00000378251 DIEXFQ68CQ4 756 aaKnown RBP22.82■■□□□ 1.24
LRRC47-201ENST00000378251 PLEKHD1A6NEE1 506 aa22.82■■□□□ 1.24
LRRC47-201ENST00000378251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.81■■□□□ 1.241e-6■■□□□ 13.9
LRRC47-201ENST00000378251 TSPY4P0CV99 314 aa22.78■■□□□ 1.24
LRRC47-201ENST00000378251 TSPY10P0CW01 314 aa22.78■■□□□ 1.24
LRRC47-201ENST00000378251 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
LRRC47-201ENST00000378251 ERICH6Q7L0X2 663 aa22.76■■□□□ 1.23
LRRC47-201ENST00000378251 RRP7BPQ9NSQ0 103 aa22.75■■□□□ 1.23
LRRC47-201ENST00000378251 CHGAP10645 457 aaKnown RBP22.71■■□□□ 1.23
LRRC47-201ENST00000378251 BCANQ96GW7 911 aa22.7■■□□□ 1.22
LRRC47-201ENST00000378251 DNAJC5BQ9UF47 199 aa22.69■■□□□ 1.22
LRRC47-201ENST00000378251 FANCD2Q9BXW9 1451 aa22.68■■□□□ 1.22
LRRC47-201ENST00000378251 ESF1Q9H501 851 aaKnown RBP22.68■■□□□ 1.22
LRRC47-201ENST00000378251 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
LRRC47-201ENST00000378251 NEFLP07196 543 aa22.67■■□□□ 1.22
LRRC47-201ENST00000378251 RUSC2Q8N2Y8 1516 aa22.64■■□□□ 1.21
LRRC47-201ENST00000378251 CFDP1Q9UEE9 299 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms