RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 KRTAP4-5Q9BYR2 181 aa6.34□□□□□ -1.4
EXT1-201ENST00000378204 LCE3AQ5TA76 89 aa6.33□□□□□ -1.4
EXT1-201ENST00000378204 ALMS1Q8TCU4 4167 aa6.23□□□□□ -1.41
EXT1-201ENST00000378204 KRTAP10-5P60370 271 aa6.19□□□□□ -1.42
EXT1-201ENST00000378204 LORP23490 312 aaPredicted RBP6.17□□□□□ -1.42
EXT1-201ENST00000378204 KRTAP8-1Q8IUC2 63 aa6.13□□□□□ -1.43
EXT1-201ENST00000378204 DNAH1Q9P2D7 4330 aa6.12□□□□□ -1.43
EXT1-201ENST00000378204 DNAH2Q9P225 4427 aa6.08□□□□□ -1.44
EXT1-201ENST00000378204 DNAH9Q9NYC9 4486 aa5.97□□□□□ -1.45
EXT1-201ENST00000378204 DNAH3Q8TD57 4116 aa5.87□□□□□ -1.47
EXT1-201ENST00000378204 VPS13BQ7Z7G8 4022 aa5.86□□□□□ -1.47
EXT1-201ENST00000378204 SPRR2GQ9BYE4 73 aa5.85□□□□□ -1.47
EXT1-201ENST00000378204 KMT2AQ03164 3969 aa5.84□□□□□ -1.47
EXT1-201ENST00000378204 MT1HP80294 61 aa5.83□□□□□ -1.48
EXT1-201ENST00000378204 LYSTQ99698 3801 aa5.82□□□□□ -1.48
EXT1-201ENST00000378204 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
EXT1-201ENST00000378204 DNAH10Q8IVF4 4471 aa5.81□□□□□ -1.48
EXT1-201ENST00000378204 ANK2Q01484 3957 aa5.81□□□□□ -1.48
EXT1-201ENST00000378204 DNAH5Q8TE73 4624 aa5.76□□□□□ -1.49
EXT1-201ENST00000378204 MT2AP02795 61 aa5.75□□□□□ -1.49
EXT1-201ENST00000378204 DNAH11Q96DT5 4516 aa5.73□□□□□ -1.49
EXT1-201ENST00000378204 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
EXT1-201ENST00000378204 FAT2Q9NYQ8 4349 aa5.71□□□□□ -1.5
EXT1-201ENST00000378204 FRAS1Q86XX4 4008 aa5.7□□□□□ -1.5
EXT1-201ENST00000378204 DNAH8Q96JB1 4490 aa5.7□□□□□ -1.5
EXT1-201ENST00000378204 DNAH7Q8WXX0 4024 aa5.68□□□□□ -1.5
EXT1-201ENST00000378204 PLECQ15149 4684 aaKnown RBP5.67□□□□□ -1.5
EXT1-201ENST00000378204 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
EXT1-201ENST00000378204 CMYA5Q8N3K9 4069 aa5.65□□□□□ -1.51
EXT1-201ENST00000378204 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.51
EXT1-201ENST00000378204 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
EXT1-201ENST00000378204 LCE3CQ5T5A8 94 aa5.64□□□□□ -1.51
EXT1-201ENST00000378204 PRKDCP78527 4128 aaKnown RBP5.63□□□□□ -1.51
EXT1-201ENST00000378204 DNAH17Q9UFH2 4485 aa5.63□□□□□ -1.51
EXT1-201ENST00000378204 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
EXT1-201ENST00000378204 DYNC2H1Q8NCM8 4307 aaKnown RBP5.62□□□□□ -1.51
EXT1-201ENST00000378204 MT1FP04733 61 aa5.61□□□□□ -1.51
EXT1-201ENST00000378204 FAT1Q14517 4588 aa5.58□□□□□ -1.52
EXT1-201ENST00000378204 HECTD4Q9Y4D8 3996 aa5.55□□□□□ -1.52
EXT1-201ENST00000378204 STARD9Q9P2P6 4700 aa5.52□□□□□ -1.53
EXT1-201ENST00000378204 LRP1BQ9NZR2 4599 aa5.52□□□□□ -1.53
EXT1-201ENST00000378204 DNAH6Q9C0G6 4158 aa5.43□□□□□ -1.54
EXT1-201ENST00000378204 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
EXT1-201ENST00000378204 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
EXT1-201ENST00000378204 SACSQ9NZJ4 4579 aa5.35□□□□□ -1.55
EXT1-201ENST00000378204 KRTAP19-8Q3LI54 63 aa5.35□□□□□ -1.55
EXT1-201ENST00000378204 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
EXT1-201ENST00000378204 APOBP04114 4563 aaKnown RBP5.29□□□□□ -1.56
EXT1-201ENST00000378204 MT3P25713 68 aa5.28□□□□□ -1.56
EXT1-201ENST00000378204 SPRR2EP22531 72 aa5.27□□□□□ -1.57
EXT1-201ENST00000378204 SPRR2BP35325 72 aa5.27□□□□□ -1.57
EXT1-201ENST00000378204 SPRR2AP35326 72 aa5.27□□□□□ -1.57
EXT1-201ENST00000378204 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
EXT1-201ENST00000378204 MYCBP2O75592 4640 aa5.23□□□□□ -1.57
EXT1-201ENST00000378204 DNHD1Q96M86 4753 aa5.22□□□□□ -1.57
EXT1-201ENST00000378204 MT1XP80297 61 aa5.21□□□□□ -1.57
EXT1-201ENST00000378204 DYNC1H1Q14204 4646 aaKnown RBP5.21□□□□□ -1.57
EXT1-201ENST00000378204 LRP1Q07954 4544 aaKnown RBP5.2□□□□□ -1.58
EXT1-201ENST00000378204 FAT3Q8TDW7 4589 aa5.18□□□□□ -1.58
EXT1-201ENST00000378204 LCE2BO14633 110 aa5.14□□□□□ -1.59
EXT1-201ENST00000378204 MT1GP13640 62 aa5.13□□□□□ -1.59
EXT1-201ENST00000378204 RYR1P21817 5038 aa5.12□□□□□ -1.59
EXT1-201ENST00000378204 SPRR2DP22532 72 aa5.1□□□□□ -1.59
EXT1-201ENST00000378204 MT1BP07438 61 aa5.08□□□□□ -1.6
EXT1-201ENST00000378204 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
EXT1-201ENST00000378204 PKHD1P08F94 4074 aa5.07□□□□□ -1.6
EXT1-201ENST00000378204 LCE3DQ9BYE3 92 aa5.06□□□□□ -1.6
EXT1-201ENST00000378204 LCE3EQ5T5B0 92 aa5.03□□□□□ -1.6
EXT1-201ENST00000378204 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
EXT1-201ENST00000378204 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
EXT1-201ENST00000378204 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
EXT1-201ENST00000378204 PKD1P98161 4303 aa4.97□□□□□ -1.61
EXT1-201ENST00000378204 KRTAP17-1Q9BYP8 105 aa4.94□□□□□ -1.62
EXT1-201ENST00000378204 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
EXT1-201ENST00000378204 PKHD1L1Q86WI1 4243 aa4.92□□□□□ -1.62
EXT1-201ENST00000378204 LCE2CQ5TA81 110 aa4.87□□□□□ -1.63
EXT1-201ENST00000378204 HSPG2P98160 4391 aa4.86□□□□□ -1.63
EXT1-201ENST00000378204 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
EXT1-201ENST00000378204 MT1LQ93083 61 aa4.84□□□□□ -1.63
EXT1-201ENST00000378204 LRP2P98164 4655 aa4.82□□□□□ -1.64
EXT1-201ENST00000378204 RYR3Q15413 4870 aa4.8□□□□□ -1.64
EXT1-201ENST00000378204 PRM1P04553 51 aa4.79□□□□□ -1.64
EXT1-201ENST00000378204 LPAP08519 4548 aa4.72□□□□□ -1.65
EXT1-201ENST00000378204 MT1EP04732 61 aa4.72□□□□□ -1.65
EXT1-201ENST00000378204 TNXBP22105 4242 aa4.72□□□□□ -1.65
EXT1-201ENST00000378204 LCE2DQ5TA82 110 aaPredicted RBP4.7□□□□□ -1.66
EXT1-201ENST00000378204 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
EXT1-201ENST00000378204 MT1MQ8N339 61 aa4.58□□□□□ -1.68
EXT1-201ENST00000378204 KRTAP19-2Q3LHN2 52 aa4.57□□□□□ -1.68
EXT1-201ENST00000378204 KIAA1109Q2LD37 5005 aa4.53□□□□□ -1.68
EXT1-201ENST00000378204 MT4P47944 62 aa4.52□□□□□ -1.69
EXT1-201ENST00000378204 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
EXT1-201ENST00000378204 RYR2Q92736 4967 aa4.49□□□□□ -1.69
EXT1-201ENST00000378204 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
EXT1-201ENST00000378204 KMT2CQ8NEZ4 4911 aaKnown RBP4.44□□□□□ -1.7
EXT1-201ENST00000378204 HERC2O95714 4834 aa4.42□□□□□ -1.7
EXT1-201ENST00000378204 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
EXT1-201ENST00000378204 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
EXT1-201ENST00000378204 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
EXT1-201ENST00000378204 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 212.3 ms