RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 INE1O15225 51 aa8.3□□□□□ -1.08
CNTNAP3B-203ENST00000377561 PLECQ15149 4684 aaKnown RBP8.29□□□□□ -1.08
CNTNAP3B-203ENST00000377561 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
CNTNAP3B-203ENST00000377561 CRCT1Q9UGL9 99 aa8.2□□□□□ -1.1
CNTNAP3B-203ENST00000377561 VPS13DQ5THJ4 4388 aa8.19□□□□□ -1.1
CNTNAP3B-203ENST00000377561 DNAH17Q9UFH2 4485 aa8.18□□□□□ -1.1
CNTNAP3B-203ENST00000377561 DNAH11Q96DT5 4516 aa8.17□□□□□ -1.1
CNTNAP3B-203ENST00000377561 DNAH10Q8IVF4 4471 aa8.16□□□□□ -1.1
CNTNAP3B-203ENST00000377561 LORP23490 312 aaPredicted RBP8.11□□□□□ -1.11
CNTNAP3B-203ENST00000377561 KRTAP23-1A1A580 65 aa8.07□□□□□ -1.12
CNTNAP3B-203ENST00000377561 KRTAP12-3P60328 96 aa8.02□□□□□ -1.12
CNTNAP3B-203ENST00000377561 DNAH2Q9P225 4427 aa7.97□□□□□ -1.13
CNTNAP3B-203ENST00000377561 DNHD1Q96M86 4753 aa7.95□□□□□ -1.14
CNTNAP3B-203ENST00000377561 STARD9Q9P2P6 4700 aa7.95□□□□□ -1.14
CNTNAP3B-203ENST00000377561 DNAH3Q8TD57 4116 aa7.94□□□□□ -1.14
CNTNAP3B-203ENST00000377561 DYNC1H1Q14204 4646 aaKnown RBP7.94□□□□□ -1.14
CNTNAP3B-203ENST00000377561 LCE3AQ5TA76 89 aa7.9□□□□□ -1.14
CNTNAP3B-203ENST00000377561 LRP1BQ9NZR2 4599 aa7.89□□□□□ -1.15
CNTNAP3B-203ENST00000377561 KRTAP4-1Q9BYQ7 146 aa7.87□□□□□ -1.15
CNTNAP3B-203ENST00000377561 DYNC2H1Q8NCM8 4307 aaKnown RBP7.84□□□□□ -1.15
CNTNAP3B-203ENST00000377561 DNAH8Q96JB1 4490 aa7.83□□□□□ -1.16
CNTNAP3B-203ENST00000377561 FAT1Q14517 4588 aa7.82□□□□□ -1.16
CNTNAP3B-203ENST00000377561 SACSQ9NZJ4 4579 aa7.8□□□□□ -1.16
CNTNAP3B-203ENST00000377561 FAT2Q9NYQ8 4349 aa7.76□□□□□ -1.17
CNTNAP3B-203ENST00000377561 PRKDCP78527 4128 aaKnown RBP7.71□□□□□ -1.18
CNTNAP3B-203ENST00000377561 ANK2Q01484 3957 aa7.7□□□□□ -1.18
CNTNAP3B-203ENST00000377561 KRTAP8-1Q8IUC2 63 aa7.66□□□□□ -1.18
CNTNAP3B-203ENST00000377561 MT1HP80294 61 aa7.62□□□□□ -1.19
CNTNAP3B-203ENST00000377561 KMT2AQ03164 3969 aa7.62□□□□□ -1.19
CNTNAP3B-203ENST00000377561 KRTAP10-5P60370 271 aa7.62□□□□□ -1.19
CNTNAP3B-203ENST00000377561 RYR1P21817 5038 aa7.62□□□□□ -1.19
CNTNAP3B-203ENST00000377561 SPRR2GQ9BYE4 73 aa7.58□□□□□ -1.2
CNTNAP3B-203ENST00000377561 VPS13BQ7Z7G8 4022 aa7.55□□□□□ -1.2
CNTNAP3B-203ENST00000377561 MT2AP02795 61 aa7.54□□□□□ -1.2
CNTNAP3B-203ENST00000377561 APOBP04114 4563 aaKnown RBP7.53□□□□□ -1.2
CNTNAP3B-203ENST00000377561 DNAH6Q9C0G6 4158 aa7.49□□□□□ -1.21
CNTNAP3B-203ENST00000377561 CMYA5Q8N3K9 4069 aa7.48□□□□□ -1.21
CNTNAP3B-203ENST00000377561 MT1FP04733 61 aa7.4□□□□□ -1.23
CNTNAP3B-203ENST00000377561 LYSTQ99698 3801 aa7.38□□□□□ -1.23
CNTNAP3B-203ENST00000377561 KRTAP17-1Q9BYP8 105 aa7.34□□□□□ -1.23
CNTNAP3B-203ENST00000377561 FRAS1Q86XX4 4008 aa7.33□□□□□ -1.24
CNTNAP3B-203ENST00000377561 HECTD4Q9Y4D8 3996 aa7.33□□□□□ -1.24
CNTNAP3B-203ENST00000377561 DNAH7Q8WXX0 4024 aa7.32□□□□□ -1.24
CNTNAP3B-203ENST00000377561 RYR3Q15413 4870 aa7.31□□□□□ -1.24
CNTNAP3B-203ENST00000377561 MYCBP2O75592 4640 aa7.28□□□□□ -1.24
CNTNAP3B-203ENST00000377561 KIAA1109Q2LD37 5005 aa7.28□□□□□ -1.24
CNTNAP3B-203ENST00000377561 RYR2Q92736 4967 aa7.22□□□□□ -1.25
CNTNAP3B-203ENST00000377561 FAT3Q8TDW7 4589 aa7.19□□□□□ -1.26
CNTNAP3B-203ENST00000377561 LRP1Q07954 4544 aaKnown RBP7.18□□□□□ -1.26
CNTNAP3B-203ENST00000377561 KRTAP19-5Q3LI72 72 aa7.12□□□□□ -1.27
CNTNAP3B-203ENST00000377561 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
CNTNAP3B-203ENST00000377561 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
CNTNAP3B-203ENST00000377561 SPRR2FQ96RM1 72 aa7.1□□□□□ -1.27
CNTNAP3B-203ENST00000377561 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
CNTNAP3B-203ENST00000377561 LCE3CQ5T5A8 94 aa7.03□□□□□ -1.28
CNTNAP3B-203ENST00000377561 HYDINQ4G0P3 5121 aa7□□□□□ -1.29
CNTNAP3B-203ENST00000377561 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
CNTNAP3B-203ENST00000377561 HSPG2P98160 4391 aa6.92□□□□□ -1.3
CNTNAP3B-203ENST00000377561 MT1XP80297 61 aa6.88□□□□□ -1.31
CNTNAP3B-203ENST00000377561 PKHD1P08F94 4074 aa6.85□□□□□ -1.31
CNTNAP3B-203ENST00000377561 HERC2O95714 4834 aa6.85□□□□□ -1.31
CNTNAP3B-203ENST00000377561 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
CNTNAP3B-203ENST00000377561 MT1BP07438 61 aa6.84□□□□□ -1.31
CNTNAP3B-203ENST00000377561 LRP2P98164 4655 aa6.83□□□□□ -1.32
CNTNAP3B-203ENST00000377561 LCE2CQ5TA81 110 aa6.82□□□□□ -1.32
CNTNAP3B-203ENST00000377561 PKD1P98161 4303 aa6.8□□□□□ -1.32
CNTNAP3B-203ENST00000377561 HERC1Q15751 4861 aa6.75□□□□□ -1.33
CNTNAP3B-203ENST00000377561 BIRC6Q9NR09 4857 aa6.71□□□□□ -1.34
CNTNAP3B-203ENST00000377561 PKHD1L1Q86WI1 4243 aa6.67□□□□□ -1.34
CNTNAP3B-203ENST00000377561 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
CNTNAP3B-203ENST00000377561 KRTAP9-3Q9BYQ3 159 aa6.67□□□□□ -1.34
CNTNAP3B-203ENST00000377561 SPRR2EP22531 72 aa6.65□□□□□ -1.35
CNTNAP3B-203ENST00000377561 SPRR2BP35325 72 aa6.65□□□□□ -1.35
CNTNAP3B-203ENST00000377561 SPRR2AP35326 72 aa6.65□□□□□ -1.35
CNTNAP3B-203ENST00000377561 TNXBP22105 4242 aa6.61□□□□□ -1.35
CNTNAP3B-203ENST00000377561 LPAP08519 4548 aa6.61□□□□□ -1.35
CNTNAP3B-203ENST00000377561 KRTAP19-2Q3LHN2 52 aa6.6□□□□□ -1.35
CNTNAP3B-203ENST00000377561 KMT2CQ8NEZ4 4911 aaKnown RBP6.6□□□□□ -1.35
CNTNAP3B-203ENST00000377561 PCLOQ9Y6V0 5065 aa6.54□□□□□ -1.36
CNTNAP3B-203ENST00000377561 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
CNTNAP3B-203ENST00000377561 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
CNTNAP3B-203ENST00000377561 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
CNTNAP3B-203ENST00000377561 SPRR2DP22532 72 aa6.44□□□□□ -1.38
CNTNAP3B-203ENST00000377561 MUC17Q685J3 4493 aa6.44□□□□□ -1.38
CNTNAP3B-203ENST00000377561 MT1GP13640 62 aa6.44□□□□□ -1.38
CNTNAP3B-203ENST00000377561 LCE2BO14633 110 aa6.4□□□□□ -1.38
CNTNAP3B-203ENST00000377561 FLGP20930 4061 aaPredicted RBP6.4□□□□□ -1.38
CNTNAP3B-203ENST00000377561 KRTAP12-4P60329 112 aa6.38□□□□□ -1.39
CNTNAP3B-203ENST00000377561 ABCA13Q86UQ4 5058 aa6.23□□□□□ -1.41
CNTNAP3B-203ENST00000377561 EPPK1P58107 5090 aaKnown RBP6.2□□□□□ -1.42
CNTNAP3B-203ENST00000377561 MT1LQ93083 61 aa6.2□□□□□ -1.42
CNTNAP3B-203ENST00000377561 LCE3DQ9BYE3 92 aa6.19□□□□□ -1.42
CNTNAP3B-203ENST00000377561 KRTAP19-3Q7Z4W3 81 aa6.16□□□□□ -1.42
CNTNAP3B-203ENST00000377561 MT1EP04732 61 aa6.16□□□□□ -1.42
CNTNAP3B-203ENST00000377561 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
CNTNAP3B-203ENST00000377561 LCE3EQ5T5B0 92 aa6.09□□□□□ -1.43
CNTNAP3B-203ENST00000377561 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
CNTNAP3B-203ENST00000377561 KRTAP19-6Q3LI70 58 aa5.99□□□□□ -1.45
CNTNAP3B-203ENST00000377561 RNF213Q63HN8 5207 aa5.94□□□□□ -1.46
CNTNAP3B-203ENST00000377561 MT1MQ8N339 61 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms