RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 DYNC1H1Q14204 4646 aaKnown RBP6.48□□□□□ -1.37
SF1-204ENST00000377390 DYNC2H1Q8NCM8 4307 aaKnown RBP6.48□□□□□ -1.37
SF1-204ENST00000377390 TPRXLQ17RH7 258 aa6.46□□□□□ -1.38
SF1-204ENST00000377390 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
SF1-204ENST00000377390 KRTAP21-3Q3LHN1 58 aa6.44□□□□□ -1.38
SF1-204ENST00000377390 SACSQ9NZJ4 4579 aa6.43□□□□□ -1.38
SF1-204ENST00000377390 APOBP04114 4563 aaKnown RBP6.39□□□□□ -1.39
SF1-204ENST00000377390 RYR1P21817 5038 aa6.39□□□□□ -1.39
SF1-204ENST00000377390 RYR3Q15413 4870 aa6.38□□□□□ -1.39
SF1-204ENST00000377390 J3QL48 77 aa6.34□□□□□ -1.39
SF1-204ENST00000377390 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
SF1-204ENST00000377390 S4R3F8 94 aa6.3□□□□□ -1.4
SF1-204ENST00000377390 LUZP6Q538Z0 58 aa6.27□□□□□ -1.41
SF1-204ENST00000377390 A0A1B0GVY2 172 aa6.26□□□□□ -1.41
SF1-204ENST00000377390 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
SF1-204ENST00000377390 EPPK1P58107 5090 aaKnown RBP6.25□□□□□ -1.41
SF1-204ENST00000377390 PKD1P98161 4303 aa6.24□□□□□ -1.41
SF1-204ENST00000377390 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
SF1-204ENST00000377390 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
SF1-204ENST00000377390 RYR2Q92736 4967 aa6.23□□□□□ -1.41
SF1-204ENST00000377390 KRTAP10-6P60371 365 aaPredicted RBP6.23□□□□□ -1.41
SF1-204ENST00000377390 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
SF1-204ENST00000377390 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
SF1-204ENST00000377390 LRP2P98164 4655 aa6.17□□□□□ -1.42
SF1-204ENST00000377390 KRTAP10-8P60410 259 aa6.16□□□□□ -1.42
SF1-204ENST00000377390 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
SF1-204ENST00000377390 HSPG2P98160 4391 aa6.12□□□□□ -1.43
SF1-204ENST00000377390 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
SF1-204ENST00000377390 LPAP08519 4548 aa6.11□□□□□ -1.43
SF1-204ENST00000377390 MUC2Q02817 5179 aa6.1□□□□□ -1.43
SF1-204ENST00000377390 KRTAP10-4P60372 401 aaPredicted RBP6.08□□□□□ -1.44
SF1-204ENST00000377390 M0QZ58 72 aa6.07□□□□□ -1.44
SF1-204ENST00000377390 ABCA13Q86UQ4 5058 aa6.06□□□□□ -1.44
SF1-204ENST00000377390 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
SF1-204ENST00000377390 XP32Q5T750 250 aa6.05□□□□□ -1.44
SF1-204ENST00000377390 R4GN34 69 aa6.04□□□□□ -1.44
SF1-204ENST00000377390 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
SF1-204ENST00000377390 HERC2O95714 4834 aa5.96□□□□□ -1.46
SF1-204ENST00000377390 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
SF1-204ENST00000377390 MT1HL1P0DM35 61 aa5.92□□□□□ -1.46
SF1-204ENST00000377390 HERC1Q15751 4861 aa5.91□□□□□ -1.46
SF1-204ENST00000377390 PKHD1L1Q86WI1 4243 aa5.91□□□□□ -1.46
SF1-204ENST00000377390 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.46
SF1-204ENST00000377390 M0R2T5 61 aa5.86□□□□□ -1.47
SF1-204ENST00000377390 PCLOQ9Y6V0 5065 aa5.79□□□□□ -1.48
SF1-204ENST00000377390 FAT4Q6V0I7 4981 aa5.79□□□□□ -1.48
SF1-204ENST00000377390 UBR4Q5T4S7 5183 aa5.73□□□□□ -1.49
SF1-204ENST00000377390 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
SF1-204ENST00000377390 TNXBP22105 4242 aa5.69□□□□□ -1.5
SF1-204ENST00000377390 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
SF1-204ENST00000377390 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
SF1-204ENST00000377390 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
SF1-204ENST00000377390 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
SF1-204ENST00000377390 TNP1P09430 55 aa5.5□□□□□ -1.53
SF1-204ENST00000377390 BIRC6Q9NR09 4857 aa5.49□□□□□ -1.53
SF1-204ENST00000377390 HMCN2Q8NDA2 5059 aa5.47□□□□□ -1.53
SF1-204ENST00000377390 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
SF1-204ENST00000377390 USH2AO75445 5202 aa5.29□□□□□ -1.56
SF1-204ENST00000377390 LCE2DQ5TA82 110 aaPredicted RBP5.21□□□□□ -1.57
SF1-204ENST00000377390 PRO2289Q9P1D8 64 aa5.21□□□□□ -1.58
SF1-204ENST00000377390 MUC17Q685J3 4493 aa5.18□□□□□ -1.58
SF1-204ENST00000377390 LCE3AQ5TA76 89 aa5.09□□□□□ -1.6
SF1-204ENST00000377390 KMT2DO14686 5537 aa5.03□□□□□ -1.6
SF1-204ENST00000377390 MT1HP80294 61 aa5.03□□□□□ -1.6
SF1-204ENST00000377390 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
SF1-204ENST00000377390 INE1O15225 51 aa4.99□□□□□ -1.61
SF1-204ENST00000377390 FLGP20930 4061 aaPredicted RBP4.98□□□□□ -1.61
SF1-204ENST00000377390 MT1FP04733 61 aa4.98□□□□□ -1.61
SF1-204ENST00000377390 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
SF1-204ENST00000377390 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.62
SF1-204ENST00000377390 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.62
SF1-204ENST00000377390 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
SF1-204ENST00000377390 MT2AP02795 61 aa4.92□□□□□ -1.62
SF1-204ENST00000377390 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
SF1-204ENST00000377390 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
SF1-204ENST00000377390 KRTAP12-3P60328 96 aa4.84□□□□□ -1.63
SF1-204ENST00000377390 SPRR2GQ9BYE4 73 aa4.81□□□□□ -1.64
SF1-204ENST00000377390 KRTAP10-12P60413 245 aa4.78□□□□□ -1.64
SF1-204ENST00000377390 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
SF1-204ENST00000377390 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
SF1-204ENST00000377390 LCE2BO14633 110 aa4.69□□□□□ -1.66
SF1-204ENST00000377390 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
SF1-204ENST00000377390 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.67
SF1-204ENST00000377390 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
SF1-204ENST00000377390 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
SF1-204ENST00000377390 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
SF1-204ENST00000377390 MT1BP07438 61 aa4.6□□□□□ -1.67
SF1-204ENST00000377390 KRTAP10-5P60370 271 aa4.59□□□□□ -1.67
SF1-204ENST00000377390 MT1XP80297 61 aa4.59□□□□□ -1.67
SF1-204ENST00000377390 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
SF1-204ENST00000377390 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
SF1-204ENST00000377390 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
SF1-204ENST00000377390 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
SF1-204ENST00000377390 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
SF1-204ENST00000377390 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
SF1-204ENST00000377390 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
SF1-204ENST00000377390 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
SF1-204ENST00000377390 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
SF1-204ENST00000377390 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
SF1-204ENST00000377390 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms