RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 DNHD1Q96M86 4753 aa2.11□□□□□ -2.07
PTAR1-202ENST00000377200 KRTAP1-4P0C5Y4 121 aa2.1□□□□□ -2.07
PTAR1-202ENST00000377200 DNAH17Q9UFH2 4485 aa2.1□□□□□ -2.07
PTAR1-202ENST00000377200 DNAH2Q9P225 4427 aa2.08□□□□□ -2.08
PTAR1-202ENST00000377200 KRTAP12-2P59991 146 aa2.08□□□□□ -2.08
PTAR1-202ENST00000377200 DNAH10Q8IVF4 4471 aa2.08□□□□□ -2.08
PTAR1-202ENST00000377200 PRO2289Q9P1D8 64 aa2.08□□□□□ -2.08
PTAR1-202ENST00000377200 VPS13BQ7Z7G8 4022 aa2.05□□□□□ -2.08
PTAR1-202ENST00000377200 INE1O15225 51 aa2.05□□□□□ -2.08
PTAR1-202ENST00000377200 KRTAP10-4P60372 401 aaPredicted RBP2.04□□□□□ -2.08
PTAR1-202ENST00000377200 XP32Q5T750 250 aa2.04□□□□□ -2.08
PTAR1-202ENST00000377200 FAT2Q9NYQ8 4349 aa2.03□□□□□ -2.08
PTAR1-202ENST00000377200 PKD1P98161 4303 aa2.03□□□□□ -2.08
PTAR1-202ENST00000377200 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
PTAR1-202ENST00000377200 PKHD1P08F94 4074 aa2.03□□□□□ -2.08
PTAR1-202ENST00000377200 DNAH8Q96JB1 4490 aa2.02□□□□□ -2.09
PTAR1-202ENST00000377200 KRTAP3-1Q9BYR8 98 aa2.02□□□□□ -2.09
PTAR1-202ENST00000377200 KRTAP13-4Q3LI77 160 aa2.02□□□□□ -2.09
PTAR1-202ENST00000377200 DNAH11Q96DT5 4516 aa2.01□□□□□ -2.09
PTAR1-202ENST00000377200 DNAH5Q8TE73 4624 aa2□□□□□ -2.09
PTAR1-202ENST00000377200 KRTAP10-6P60371 365 aaPredicted RBP1.99□□□□□ -2.09
PTAR1-202ENST00000377200 M0R2T5 61 aa1.99□□□□□ -2.09
PTAR1-202ENST00000377200 SACSQ9NZJ4 4579 aa1.98□□□□□ -2.09
PTAR1-202ENST00000377200 LRP1BQ9NZR2 4599 aa1.98□□□□□ -2.09
PTAR1-202ENST00000377200 DYNC1H1Q14204 4646 aaKnown RBP1.97□□□□□ -2.09
PTAR1-202ENST00000377200 PKHD1L1Q86WI1 4243 aa1.96□□□□□ -2.1
PTAR1-202ENST00000377200 MT1HL1P0DM35 61 aa1.96□□□□□ -2.1
PTAR1-202ENST00000377200 HYDINQ4G0P3 5121 aa1.96□□□□□ -2.1
PTAR1-202ENST00000377200 RYR2Q92736 4967 aa1.95□□□□□ -2.1
PTAR1-202ENST00000377200 KMT2CQ8NEZ4 4911 aaKnown RBP1.93□□□□□ -2.1
PTAR1-202ENST00000377200 KRTAP3-2Q9BYR7 98 aa1.93□□□□□ -2.1
PTAR1-202ENST00000377200 APOBP04114 4563 aaKnown RBP1.92□□□□□ -2.1
PTAR1-202ENST00000377200 HSPG2P98160 4391 aa1.91□□□□□ -2.1
PTAR1-202ENST00000377200 KRTAP4-5Q9BYR2 181 aa1.9□□□□□ -2.1
PTAR1-202ENST00000377200 HERC1Q15751 4861 aa1.89□□□□□ -2.11
PTAR1-202ENST00000377200 TNXBP22105 4242 aa1.88□□□□□ -2.11
PTAR1-202ENST00000377200 FAT1Q14517 4588 aa1.87□□□□□ -2.11
PTAR1-202ENST00000377200 RYR3Q15413 4870 aa1.87□□□□□ -2.11
PTAR1-202ENST00000377200 KRTAP3-3Q9BYR6 98 aa1.87□□□□□ -2.11
PTAR1-202ENST00000377200 LCE2DQ5TA82 110 aaPredicted RBP1.85□□□□□ -2.11
PTAR1-202ENST00000377200 KRTAP23-1A1A580 65 aa1.85□□□□□ -2.11
PTAR1-202ENST00000377200 PCLOQ9Y6V0 5065 aa1.84□□□□□ -2.12
PTAR1-202ENST00000377200 KIAA1109Q2LD37 5005 aa1.83□□□□□ -2.12
PTAR1-202ENST00000377200 FAT3Q8TDW7 4589 aa1.83□□□□□ -2.12
PTAR1-202ENST00000377200 LRP1Q07954 4544 aaKnown RBP1.83□□□□□ -2.12
PTAR1-202ENST00000377200 MYCBP2O75592 4640 aa1.82□□□□□ -2.12
PTAR1-202ENST00000377200 BIRC6Q9NR09 4857 aa1.8□□□□□ -2.12
PTAR1-202ENST00000377200 EPPK1P58107 5090 aaKnown RBP1.77□□□□□ -2.13
PTAR1-202ENST00000377200 HERC2O95714 4834 aa1.76□□□□□ -2.13
PTAR1-202ENST00000377200 KRTAP19-4Q3LI73 84 aa1.76□□□□□ -2.13
PTAR1-202ENST00000377200 KRTAP10-10P60014 251 aa1.75□□□□□ -2.13
PTAR1-202ENST00000377200 FLGP20930 4061 aaPredicted RBP1.75□□□□□ -2.13
PTAR1-202ENST00000377200 LCE3AQ5TA76 89 aa1.74□□□□□ -2.13
PTAR1-202ENST00000377200 LORP23490 312 aaPredicted RBP1.71□□□□□ -2.14
PTAR1-202ENST00000377200 KRTAP4-1Q9BYQ7 146 aa1.71□□□□□ -2.14
PTAR1-202ENST00000377200 ABCA13Q86UQ4 5058 aa1.71□□□□□ -2.14
PTAR1-202ENST00000377200 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
PTAR1-202ENST00000377200 LRP2P98164 4655 aa1.69□□□□□ -2.14
PTAR1-202ENST00000377200 KRTAP10-12P60413 245 aa1.68□□□□□ -2.14
PTAR1-202ENST00000377200 MUC17Q685J3 4493 aa1.68□□□□□ -2.14
PTAR1-202ENST00000377200 SPRR5A0A1B0GTR4 108 aa1.66□□□□□ -2.14
PTAR1-202ENST00000377200 MT1HP80294 61 aa1.66□□□□□ -2.14
PTAR1-202ENST00000377200 LPAP08519 4548 aa1.65□□□□□ -2.14
PTAR1-202ENST00000377200 KRTAP19-2Q3LHN2 52 aa1.64□□□□□ -2.15
PTAR1-202ENST00000377200 LCE2CQ5TA81 110 aa1.63□□□□□ -2.15
PTAR1-202ENST00000377200 SPRR2GQ9BYE4 73 aa1.6□□□□□ -2.15
PTAR1-202ENST00000377200 MT2AP02795 61 aa1.59□□□□□ -2.15
PTAR1-202ENST00000377200 KRTAP10-5P60370 271 aa1.59□□□□□ -2.15
PTAR1-202ENST00000377200 HMCN2Q8NDA2 5059 aa1.58□□□□□ -2.16
PTAR1-202ENST00000377200 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
PTAR1-202ENST00000377200 KRTAP8-1Q8IUC2 63 aa1.57□□□□□ -2.16
PTAR1-202ENST00000377200 MT1FP04733 61 aa1.57□□□□□ -2.16
PTAR1-202ENST00000377200 KRTAP9-8Q9BYQ0 159 aa1.56□□□□□ -2.16
PTAR1-202ENST00000377200 UBR4Q5T4S7 5183 aa1.56□□□□□ -2.16
PTAR1-202ENST00000377200 RNF213Q63HN8 5207 aa1.56□□□□□ -2.16
PTAR1-202ENST00000377200 LCE2AQ5TA79 106 aaPredicted RBP1.55□□□□□ -2.16
PTAR1-202ENST00000377200 KRTAP19-8Q3LI54 63 aa1.55□□□□□ -2.16
PTAR1-202ENST00000377200 MT3P25713 68 aa1.54□□□□□ -2.16
PTAR1-202ENST00000377200 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
PTAR1-202ENST00000377200 KRTAP19-1Q8IUB9 90 aa1.54□□□□□ -2.16
PTAR1-202ENST00000377200 LCE2BO14633 110 aa1.53□□□□□ -2.16
PTAR1-202ENST00000377200 LCE3CQ5T5A8 94 aa1.53□□□□□ -2.17
PTAR1-202ENST00000377200 KRTAP9-3Q9BYQ3 159 aa1.52□□□□□ -2.17
PTAR1-202ENST00000377200 MUC2Q02817 5179 aa1.52□□□□□ -2.17
PTAR1-202ENST00000377200 FAT4Q6V0I7 4981 aa1.49□□□□□ -2.17
PTAR1-202ENST00000377200 KRTAP19-5Q3LI72 72 aa1.48□□□□□ -2.17
PTAR1-202ENST00000377200 MT1BP07438 61 aa1.47□□□□□ -2.17
PTAR1-202ENST00000377200 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
PTAR1-202ENST00000377200 MT1XP80297 61 aa1.44□□□□□ -2.18
PTAR1-202ENST00000377200 KRTAP19-6Q3LI70 58 aa1.42□□□□□ -2.18
PTAR1-202ENST00000377200 KRTAP9-2Q9BYQ4 174 aa1.39□□□□□ -2.19
PTAR1-202ENST00000377200 KRTAP10-7P60409 375 aaPredicted RBP1.39□□□□□ -2.19
PTAR1-202ENST00000377200 GPR98Q8WXG9 6306 aa1.38□□□□□ -2.19
PTAR1-202ENST00000377200 LCE3EQ5T5B0 92 aa1.36□□□□□ -2.19
PTAR1-202ENST00000377200 LCE3DQ9BYE3 92 aa1.34□□□□□ -2.19
PTAR1-202ENST00000377200 LCE3BQ5TA77 95 aa1.33□□□□□ -2.2
PTAR1-202ENST00000377200 MT1GP13640 62 aa1.32□□□□□ -2.2
PTAR1-202ENST00000377200 LOC100996750A0A140TA64 210 aa1.32□□□□□ -2.2
PTAR1-202ENST00000377200 PRM1P04553 51 aa1.32□□□□□ -2.2
PTAR1-202ENST00000377200 KRTAP4-6Q9BYQ5 205 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms