RNA–Protein interactions for RNA: ENST00000376834.7

CARNMT1-202, Transcript of carnosine N-methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARNMT1, Length 4,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARNMT1-202ENST00000376834 DNAH8Q96JB1 4490 aa7.79□□□□□ -1.16
CARNMT1-202ENST00000376834 KIAA1109Q2LD37 5005 aa7.78□□□□□ -1.16
CARNMT1-202ENST00000376834 KRTAP25-1Q3LHN0 102 aa7.78□□□□□ -1.16
CARNMT1-202ENST00000376834 ALMS1Q8TCU4 4167 aa7.78□□□□□ -1.16
CARNMT1-202ENST00000376834 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
CARNMT1-202ENST00000376834 C10orf95Q9H7T3 257 aa7.74□□□□□ -1.17
CARNMT1-202ENST00000376834 RYR1P21817 5038 aa7.7□□□□□ -1.18
CARNMT1-202ENST00000376834 PLAC4Q8WY50 150 aa7.7□□□□□ -1.18
CARNMT1-202ENST00000376834 DYNC2H1Q8NCM8 4307 aaKnown RBP7.68□□□□□ -1.18
CARNMT1-202ENST00000376834 FRAS1Q86XX4 4008 aa7.68□□□□□ -1.18
CARNMT1-202ENST00000376834 DNAH6Q9C0G6 4158 aa7.68□□□□□ -1.18
CARNMT1-202ENST00000376834 HYDINQ4G0P3 5121 aa7.65□□□□□ -1.19
CARNMT1-202ENST00000376834 NDUFAF8A1L188 74 aa7.64□□□□□ -1.19
CARNMT1-202ENST00000376834 VPS13BQ7Z7G8 4022 aa7.63□□□□□ -1.19
CARNMT1-202ENST00000376834 RYR3Q15413 4870 aa7.62□□□□□ -1.19
CARNMT1-202ENST00000376834 MYCBP2O75592 4640 aa7.61□□□□□ -1.19
CARNMT1-202ENST00000376834 SACSQ9NZJ4 4579 aa7.56□□□□□ -1.2
CARNMT1-202ENST00000376834 KRTAP10-10P60014 251 aa7.54□□□□□ -1.2
CARNMT1-202ENST00000376834 FAT2Q9NYQ8 4349 aa7.54□□□□□ -1.2
CARNMT1-202ENST00000376834 APOBP04114 4563 aaKnown RBP7.53□□□□□ -1.2
CARNMT1-202ENST00000376834 LRP1Q07954 4544 aaKnown RBP7.53□□□□□ -1.2
CARNMT1-202ENST00000376834 PKHD1P08F94 4074 aa7.53□□□□□ -1.2
CARNMT1-202ENST00000376834 HECTD4Q9Y4D8 3996 aa7.52□□□□□ -1.21
CARNMT1-202ENST00000376834 KMT2CQ8NEZ4 4911 aaKnown RBP7.51□□□□□ -1.21
CARNMT1-202ENST00000376834 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
CARNMT1-202ENST00000376834 KRTAP17-1Q9BYP8 105 aa7.49□□□□□ -1.21
CARNMT1-202ENST00000376834 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
CARNMT1-202ENST00000376834 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
CARNMT1-202ENST00000376834 RYR2Q92736 4967 aa7.42□□□□□ -1.22
CARNMT1-202ENST00000376834 KRTAP13-4Q3LI77 160 aa7.41□□□□□ -1.22
CARNMT1-202ENST00000376834 KRTAP12-2P59991 146 aa7.38□□□□□ -1.23
CARNMT1-202ENST00000376834 TNP1P09430 55 aa7.35□□□□□ -1.23
CARNMT1-202ENST00000376834 A0A0A0MQY5 61 aa7.32□□□□□ -1.24
CARNMT1-202ENST00000376834 KRTAP12-1P59990 96 aa7.29□□□□□ -1.24
CARNMT1-202ENST00000376834 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
CARNMT1-202ENST00000376834 KRTAP4-1Q9BYQ7 146 aa7.21□□□□□ -1.26
CARNMT1-202ENST00000376834 HERC2O95714 4834 aa7.21□□□□□ -1.26
CARNMT1-202ENST00000376834 PKD1P98161 4303 aa7.18□□□□□ -1.26
CARNMT1-202ENST00000376834 LRP2P98164 4655 aa7.16□□□□□ -1.26
CARNMT1-202ENST00000376834 HSPG2P98160 4391 aa7.11□□□□□ -1.27
CARNMT1-202ENST00000376834 LORP23490 312 aaPredicted RBP7.08□□□□□ -1.28
CARNMT1-202ENST00000376834 EPPK1P58107 5090 aaKnown RBP7.06□□□□□ -1.28
CARNMT1-202ENST00000376834 PP632Q6XCG6 107 aa7.02□□□□□ -1.29
CARNMT1-202ENST00000376834 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.29
CARNMT1-202ENST00000376834 BIRC6Q9NR09 4857 aa6.9□□□□□ -1.31
CARNMT1-202ENST00000376834 LPAP08519 4548 aa6.88□□□□□ -1.31
CARNMT1-202ENST00000376834 ABCA13Q86UQ4 5058 aa6.84□□□□□ -1.31
CARNMT1-202ENST00000376834 MT1HP80294 61 aa6.76□□□□□ -1.33
CARNMT1-202ENST00000376834 PKHD1L1Q86WI1 4243 aa6.69□□□□□ -1.34
CARNMT1-202ENST00000376834 PCLOQ9Y6V0 5065 aa6.67□□□□□ -1.34
CARNMT1-202ENST00000376834 TNXBP22105 4242 aa6.66□□□□□ -1.34
CARNMT1-202ENST00000376834 MT2AP02795 61 aa6.62□□□□□ -1.35
CARNMT1-202ENST00000376834 HERC1Q15751 4861 aa6.62□□□□□ -1.35
CARNMT1-202ENST00000376834 MT1FP04733 61 aa6.57□□□□□ -1.36
CARNMT1-202ENST00000376834 MUC2Q02817 5179 aa6.55□□□□□ -1.36
CARNMT1-202ENST00000376834 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
CARNMT1-202ENST00000376834 RNF213Q63HN8 5207 aa6.52□□□□□ -1.37
CARNMT1-202ENST00000376834 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
CARNMT1-202ENST00000376834 SPRR2GQ9BYE4 73 aa6.46□□□□□ -1.37
CARNMT1-202ENST00000376834 LCE2CQ5TA81 110 aa6.43□□□□□ -1.38
CARNMT1-202ENST00000376834 LCE3AQ5TA76 89 aa6.42□□□□□ -1.38
CARNMT1-202ENST00000376834 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
CARNMT1-202ENST00000376834 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
CARNMT1-202ENST00000376834 KRTAP19-2Q3LHN2 52 aa6.34□□□□□ -1.4
CARNMT1-202ENST00000376834 FAT4Q6V0I7 4981 aa6.34□□□□□ -1.4
CARNMT1-202ENST00000376834 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
CARNMT1-202ENST00000376834 KRTAP9-8Q9BYQ0 159 aa6.28□□□□□ -1.4
CARNMT1-202ENST00000376834 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
CARNMT1-202ENST00000376834 MUC17Q685J3 4493 aa6.23□□□□□ -1.41
CARNMT1-202ENST00000376834 HMCN2Q8NDA2 5059 aa6.2□□□□□ -1.42
CARNMT1-202ENST00000376834 FLGP20930 4061 aaPredicted RBP6.17□□□□□ -1.42
CARNMT1-202ENST00000376834 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
CARNMT1-202ENST00000376834 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
CARNMT1-202ENST00000376834 MT1BP07438 61 aa6.09□□□□□ -1.43
CARNMT1-202ENST00000376834 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
CARNMT1-202ENST00000376834 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
CARNMT1-202ENST00000376834 KRTAP8-1Q8IUC2 63 aa6.04□□□□□ -1.44
CARNMT1-202ENST00000376834 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
CARNMT1-202ENST00000376834 MT1XP80297 61 aa6.01□□□□□ -1.45
CARNMT1-202ENST00000376834 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
CARNMT1-202ENST00000376834 LCE2BO14633 110 aa5.92□□□□□ -1.46
CARNMT1-202ENST00000376834 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
CARNMT1-202ENST00000376834 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
CARNMT1-202ENST00000376834 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
CARNMT1-202ENST00000376834 LCE2AQ5TA79 106 aaPredicted RBP5.77□□□□□ -1.49
CARNMT1-202ENST00000376834 SPRR2FQ96RM1 72 aa5.77□□□□□ -1.49
CARNMT1-202ENST00000376834 OBSCNQ5VST9 7968 aa5.75□□□□□ -1.49
CARNMT1-202ENST00000376834 USH2AO75445 5202 aa5.66□□□□□ -1.5
CARNMT1-202ENST00000376834 INE1O15225 51 aa5.64□□□□□ -1.51
CARNMT1-202ENST00000376834 LCE3CQ5T5A8 94 aa5.64□□□□□ -1.51
CARNMT1-202ENST00000376834 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
CARNMT1-202ENST00000376834 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
CARNMT1-202ENST00000376834 KRTAP19-6Q3LI70 58 aa5.39□□□□□ -1.55
CARNMT1-202ENST00000376834 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
CARNMT1-202ENST00000376834 KMT2DO14686 5537 aa5.36□□□□□ -1.55
CARNMT1-202ENST00000376834 MT1GP13640 62 aa5.34□□□□□ -1.55
CARNMT1-202ENST00000376834 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.55
CARNMT1-202ENST00000376834 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
CARNMT1-202ENST00000376834 SPRR2EP22531 72 aa5.32□□□□□ -1.56
CARNMT1-202ENST00000376834 SPRR2BP35325 72 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms