RNA–Protein interactions for RNA: ENST00000376300.6

CCDC93-202, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC93, Length 6,899 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-202ENST00000376300 LYSTQ99698 3801 aa3.74□□□□□ -1.81
CCDC93-202ENST00000376300 KRTAP12-2P59991 146 aa3.73□□□□□ -1.81
CCDC93-202ENST00000376300 DYNC1H1Q14204 4646 aaKnown RBP3.73□□□□□ -1.81
CCDC93-202ENST00000376300 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
CCDC93-202ENST00000376300 ANK2Q01484 3957 aa3.69□□□□□ -1.82
CCDC93-202ENST00000376300 KRTAP10-4P60372 401 aaPredicted RBP3.69□□□□□ -1.82
CCDC93-202ENST00000376300 KRTAP10-10P60014 251 aa3.68□□□□□ -1.82
CCDC93-202ENST00000376300 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
CCDC93-202ENST00000376300 BIRC6Q9NR09 4857 aa3.67□□□□□ -1.82
CCDC93-202ENST00000376300 LRP1BQ9NZR2 4599 aa3.66□□□□□ -1.82
CCDC93-202ENST00000376300 MYCBP2O75592 4640 aa3.66□□□□□ -1.82
CCDC93-202ENST00000376300 RYR2Q92736 4967 aa3.63□□□□□ -1.83
CCDC93-202ENST00000376300 KRTAP17-1Q9BYP8 105 aa3.62□□□□□ -1.83
CCDC93-202ENST00000376300 EPPK1P58107 5090 aaKnown RBP3.61□□□□□ -1.83
CCDC93-202ENST00000376300 KMT2AQ03164 3969 aa3.61□□□□□ -1.83
CCDC93-202ENST00000376300 SACSQ9NZJ4 4579 aa3.6□□□□□ -1.83
CCDC93-202ENST00000376300 APOBP04114 4563 aaKnown RBP3.58□□□□□ -1.84
CCDC93-202ENST00000376300 DNAH10Q8IVF4 4471 aa3.58□□□□□ -1.84
CCDC93-202ENST00000376300 VPS13DQ5THJ4 4388 aa3.57□□□□□ -1.84
CCDC93-202ENST00000376300 LRP1Q07954 4544 aaKnown RBP3.57□□□□□ -1.84
CCDC93-202ENST00000376300 LRP2P98164 4655 aa3.57□□□□□ -1.84
CCDC93-202ENST00000376300 KRTAP12-1P59990 96 aa3.55□□□□□ -1.84
CCDC93-202ENST00000376300 FSIP2Q5CZC0 6907 aa3.55□□□□□ -1.84
CCDC93-202ENST00000376300 VPS13BQ7Z7G8 4022 aa3.54□□□□□ -1.84
CCDC93-202ENST00000376300 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
CCDC93-202ENST00000376300 KRTAP13-4Q3LI77 160 aa3.51□□□□□ -1.85
CCDC93-202ENST00000376300 DNAH17Q9UFH2 4485 aa3.51□□□□□ -1.85
CCDC93-202ENST00000376300 UBR4Q5T4S7 5183 aa3.51□□□□□ -1.85
CCDC93-202ENST00000376300 ALMS1Q8TCU4 4167 aa3.5□□□□□ -1.85
CCDC93-202ENST00000376300 ABCA13Q86UQ4 5058 aa3.49□□□□□ -1.85
CCDC93-202ENST00000376300 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
CCDC93-202ENST00000376300 PKHD1P08F94 4074 aa3.48□□□□□ -1.85
CCDC93-202ENST00000376300 KRTAP3-1Q9BYR8 98 aa3.47□□□□□ -1.85
CCDC93-202ENST00000376300 HERC1Q15751 4861 aa3.46□□□□□ -1.86
CCDC93-202ENST00000376300 DNAH2Q9P225 4427 aa3.46□□□□□ -1.86
CCDC93-202ENST00000376300 RNF213Q63HN8 5207 aa3.46□□□□□ -1.86
CCDC93-202ENST00000376300 FAT2Q9NYQ8 4349 aa3.43□□□□□ -1.86
CCDC93-202ENST00000376300 PRO2289Q9P1D8 64 aa3.43□□□□□ -1.86
CCDC93-202ENST00000376300 DYNC2H1Q8NCM8 4307 aaKnown RBP3.4□□□□□ -1.87
CCDC93-202ENST00000376300 DNAH6Q9C0G6 4158 aa3.39□□□□□ -1.87
CCDC93-202ENST00000376300 KRTAP10-6P60371 365 aaPredicted RBP3.37□□□□□ -1.87
CCDC93-202ENST00000376300 CMYA5Q8N3K9 4069 aa3.36□□□□□ -1.87
CCDC93-202ENST00000376300 KRTAP4-1Q9BYQ7 146 aa3.36□□□□□ -1.87
CCDC93-202ENST00000376300 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
CCDC93-202ENST00000376300 DNAH7Q8WXX0 4024 aa3.34□□□□□ -1.87
CCDC93-202ENST00000376300 DNAH3Q8TD57 4116 aa3.34□□□□□ -1.88
CCDC93-202ENST00000376300 INE1O15225 51 aa3.33□□□□□ -1.88
CCDC93-202ENST00000376300 HSPG2P98160 4391 aa3.32□□□□□ -1.88
CCDC93-202ENST00000376300 FRAS1Q86XX4 4008 aa3.31□□□□□ -1.88
CCDC93-202ENST00000376300 KRTAP3-3Q9BYR6 98 aa3.24□□□□□ -1.89
CCDC93-202ENST00000376300 KRTAP3-2Q9BYR7 98 aa3.24□□□□□ -1.89
CCDC93-202ENST00000376300 MT1HP80294 61 aa3.23□□□□□ -1.89
CCDC93-202ENST00000376300 MUC2Q02817 5179 aa3.2□□□□□ -1.9
CCDC93-202ENST00000376300 LORP23490 312 aaPredicted RBP3.19□□□□□ -1.9
CCDC93-202ENST00000376300 LPAP08519 4548 aa3.18□□□□□ -1.9
CCDC93-202ENST00000376300 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
CCDC93-202ENST00000376300 FAT4Q6V0I7 4981 aa3.16□□□□□ -1.9
CCDC93-202ENST00000376300 KRTAP10-12P60413 245 aa3.15□□□□□ -1.91
CCDC93-202ENST00000376300 PKD1P98161 4303 aa3.14□□□□□ -1.91
CCDC93-202ENST00000376300 MT2AP02795 61 aa3.12□□□□□ -1.91
CCDC93-202ENST00000376300 HECTD4Q9Y4D8 3996 aa3.12□□□□□ -1.91
CCDC93-202ENST00000376300 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
CCDC93-202ENST00000376300 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
CCDC93-202ENST00000376300 MT1FP04733 61 aa3.09□□□□□ -1.91
CCDC93-202ENST00000376300 KRTAP12-3P60328 96 aa3.09□□□□□ -1.91
CCDC93-202ENST00000376300 KRTAP10-5P60370 271 aa3.09□□□□□ -1.91
CCDC93-202ENST00000376300 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
CCDC93-202ENST00000376300 KRTAP9-2Q9BYQ4 174 aa3.03□□□□□ -1.92
CCDC93-202ENST00000376300 LCE2CQ5TA81 110 aa3.01□□□□□ -1.93
CCDC93-202ENST00000376300 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
CCDC93-202ENST00000376300 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
CCDC93-202ENST00000376300 PKHD1L1Q86WI1 4243 aa2.95□□□□□ -1.94
CCDC93-202ENST00000376300 KRTAP9-8Q9BYQ0 159 aa2.94□□□□□ -1.94
CCDC93-202ENST00000376300 SPRR2FQ96RM1 72 aa2.92□□□□□ -1.94
CCDC93-202ENST00000376300 LCE2AQ5TA79 106 aaPredicted RBP2.91□□□□□ -1.94
CCDC93-202ENST00000376300 KMT2DO14686 5537 aa2.9□□□□□ -1.94
CCDC93-202ENST00000376300 SYNE2Q8WXH0 6885 aaKnown RBP2.9□□□□□ -1.95
CCDC93-202ENST00000376300 KRTAP19-2Q3LHN2 52 aa2.89□□□□□ -1.95
CCDC93-202ENST00000376300 KRTAP9-6A0A140TA67 174 aa2.89□□□□□ -1.95
CCDC93-202ENST00000376300 KRTAP23-1A1A580 65 aa2.89□□□□□ -1.95
CCDC93-202ENST00000376300 USH2AO75445 5202 aa2.89□□□□□ -1.95
CCDC93-202ENST00000376300 KRTAP19-1Q8IUB9 90 aa2.87□□□□□ -1.95
CCDC93-202ENST00000376300 SPRR2GQ9BYE4 73 aa2.87□□□□□ -1.95
CCDC93-202ENST00000376300 MUC17Q685J3 4493 aa2.86□□□□□ -1.95
CCDC93-202ENST00000376300 LCE2BO14633 110 aa2.85□□□□□ -1.95
CCDC93-202ENST00000376300 KRTAP9-3Q9BYQ3 159 aa2.84□□□□□ -1.95
CCDC93-202ENST00000376300 TNXBP22105 4242 aa2.84□□□□□ -1.95
CCDC93-202ENST00000376300 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
CCDC93-202ENST00000376300 LCE2DQ5TA82 110 aaPredicted RBP2.8□□□□□ -1.96
CCDC93-202ENST00000376300 MT1BP07438 61 aa2.78□□□□□ -1.97
CCDC93-202ENST00000376300 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
CCDC93-202ENST00000376300 FLGP20930 4061 aaPredicted RBP2.75□□□□□ -1.97
CCDC93-202ENST00000376300 KRTAP19-8Q3LI54 63 aa2.75□□□□□ -1.97
CCDC93-202ENST00000376300 KRTAP4-8A0A0G2JLE6 195 aa2.74□□□□□ -1.97
CCDC93-202ENST00000376300 KRTAP4-8Q9BYQ9 185 aa2.74□□□□□ -1.97
CCDC93-202ENST00000376300 SPRR2EP22531 72 aa2.74□□□□□ -1.97
CCDC93-202ENST00000376300 SPRR2BP35325 72 aa2.74□□□□□ -1.97
CCDC93-202ENST00000376300 SPRR2AP35326 72 aa2.74□□□□□ -1.97
CCDC93-202ENST00000376300 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
CCDC93-202ENST00000376300 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms