RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
ZNF550-203ENST00000376230 XP32Q5T750 250 aa5.27□□□□□ -1.57
ZNF550-203ENST00000376230 FAT2Q9NYQ8 4349 aa5.25□□□□□ -1.57
ZNF550-203ENST00000376230 KRTAP10-8P60410 259 aa5.25□□□□□ -1.57
ZNF550-203ENST00000376230 ROMO1P60602 79 aa5.24□□□□□ -1.57
ZNF550-203ENST00000376230 RYR1P21817 5038 aa5.23□□□□□ -1.57
ZNF550-203ENST00000376230 RPS29P62273 56 aaKnown RBP5.23□□□□□ -1.57
ZNF550-203ENST00000376230 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
ZNF550-203ENST00000376230 RPL37P61927 97 aaKnown RBP5.22□□□□□ -1.57
ZNF550-203ENST00000376230 SACSQ9NZJ4 4579 aa5.22□□□□□ -1.57
ZNF550-203ENST00000376230 KRTAP4-5Q9BYR2 181 aa5.21□□□□□ -1.57
ZNF550-203ENST00000376230 APOBP04114 4563 aaKnown RBP5.21□□□□□ -1.58
ZNF550-203ENST00000376230 KRTAP10-4P60372 401 aaPredicted RBP5.21□□□□□ -1.58
ZNF550-203ENST00000376230 P0C880 135 aa5.18□□□□□ -1.58
ZNF550-203ENST00000376230 RYR3Q15413 4870 aa5.17□□□□□ -1.58
ZNF550-203ENST00000376230 KRTAP17-1Q9BYP8 105 aa5.14□□□□□ -1.59
ZNF550-203ENST00000376230 M0QZ58 72 aa5.13□□□□□ -1.59
ZNF550-203ENST00000376230 R4GN34 69 aa5.12□□□□□ -1.59
ZNF550-203ENST00000376230 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
ZNF550-203ENST00000376230 PKD1P98161 4303 aa5.08□□□□□ -1.6
ZNF550-203ENST00000376230 M0R2T5 61 aa5.08□□□□□ -1.6
ZNF550-203ENST00000376230 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
ZNF550-203ENST00000376230 MT1HL1P0DM35 61 aa5.07□□□□□ -1.6
ZNF550-203ENST00000376230 TPRXLQ17RH7 258 aa5.06□□□□□ -1.6
ZNF550-203ENST00000376230 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
ZNF550-203ENST00000376230 RYR2Q92736 4967 aa5.04□□□□□ -1.6
ZNF550-203ENST00000376230 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
ZNF550-203ENST00000376230 CAMK2N1Q7Z7J9 78 aa5.02□□□□□ -1.61
ZNF550-203ENST00000376230 LRP2P98164 4655 aa5.02□□□□□ -1.61
ZNF550-203ENST00000376230 KRTAP12-2P59991 146 aa5□□□□□ -1.61
ZNF550-203ENST00000376230 KRTAP3-3Q9BYR6 98 aa4.99□□□□□ -1.61
ZNF550-203ENST00000376230 EPPK1P58107 5090 aaKnown RBP4.95□□□□□ -1.62
ZNF550-203ENST00000376230 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
ZNF550-203ENST00000376230 HSPG2P98160 4391 aa4.95□□□□□ -1.62
ZNF550-203ENST00000376230 LPAP08519 4548 aa4.95□□□□□ -1.62
ZNF550-203ENST00000376230 KRTAP12-1P59990 96 aa4.88□□□□□ -1.63
ZNF550-203ENST00000376230 MUC2Q02817 5179 aa4.85□□□□□ -1.63
ZNF550-203ENST00000376230 ABCA13Q86UQ4 5058 aa4.83□□□□□ -1.64
ZNF550-203ENST00000376230 HERC2O95714 4834 aa4.82□□□□□ -1.64
ZNF550-203ENST00000376230 PKHD1L1Q86WI1 4243 aa4.82□□□□□ -1.64
ZNF550-203ENST00000376230 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
ZNF550-203ENST00000376230 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
ZNF550-203ENST00000376230 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
ZNF550-203ENST00000376230 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
ZNF550-203ENST00000376230 TNXBP22105 4242 aa4.7□□□□□ -1.66
ZNF550-203ENST00000376230 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
ZNF550-203ENST00000376230 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
ZNF550-203ENST00000376230 HERC1Q15751 4861 aa4.66□□□□□ -1.66
ZNF550-203ENST00000376230 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
ZNF550-203ENST00000376230 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
ZNF550-203ENST00000376230 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.68
ZNF550-203ENST00000376230 TNP1P09430 55 aa4.52□□□□□ -1.69
ZNF550-203ENST00000376230 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
ZNF550-203ENST00000376230 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
ZNF550-203ENST00000376230 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
ZNF550-203ENST00000376230 BIRC6Q9NR09 4857 aa4.43□□□□□ -1.7
ZNF550-203ENST00000376230 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
ZNF550-203ENST00000376230 HMCN2Q8NDA2 5059 aa4.35□□□□□ -1.71
ZNF550-203ENST00000376230 MT1HP80294 61 aa4.29□□□□□ -1.72
ZNF550-203ENST00000376230 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
ZNF550-203ENST00000376230 MT1FP04733 61 aa4.26□□□□□ -1.73
ZNF550-203ENST00000376230 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
ZNF550-203ENST00000376230 MT2AP02795 61 aa4.23□□□□□ -1.73
ZNF550-203ENST00000376230 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
ZNF550-203ENST00000376230 LCE2CQ5TA81 110 aa4.21□□□□□ -1.74
ZNF550-203ENST00000376230 USH2AO75445 5202 aa4.2□□□□□ -1.74
ZNF550-203ENST00000376230 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
ZNF550-203ENST00000376230 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.75
ZNF550-203ENST00000376230 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
ZNF550-203ENST00000376230 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
ZNF550-203ENST00000376230 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
ZNF550-203ENST00000376230 KRTAP9-8Q9BYQ0 159 aa4.06□□□□□ -1.76
ZNF550-203ENST00000376230 KMT2DO14686 5537 aa4.04□□□□□ -1.76
ZNF550-203ENST00000376230 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
ZNF550-203ENST00000376230 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
ZNF550-203ENST00000376230 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
ZNF550-203ENST00000376230 MT1BP07438 61 aa3.97□□□□□ -1.77
ZNF550-203ENST00000376230 KRTAP23-1A1A580 65 aa3.96□□□□□ -1.78
ZNF550-203ENST00000376230 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
ZNF550-203ENST00000376230 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
ZNF550-203ENST00000376230 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
ZNF550-203ENST00000376230 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
ZNF550-203ENST00000376230 MT1XP80297 61 aa3.93□□□□□ -1.78
ZNF550-203ENST00000376230 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
ZNF550-203ENST00000376230 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.78
ZNF550-203ENST00000376230 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
ZNF550-203ENST00000376230 LCE2BO14633 110 aa3.87□□□□□ -1.79
ZNF550-203ENST00000376230 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
ZNF550-203ENST00000376230 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
ZNF550-203ENST00000376230 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.8
ZNF550-203ENST00000376230 KRTAP8-1Q8IUC2 63 aa3.82□□□□□ -1.8
ZNF550-203ENST00000376230 KRTAP4-7Q9BYR0 210 aa3.78□□□□□ -1.8
ZNF550-203ENST00000376230 INE1O15225 51 aa3.76□□□□□ -1.81
ZNF550-203ENST00000376230 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
ZNF550-203ENST00000376230 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
ZNF550-203ENST00000376230 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
ZNF550-203ENST00000376230 LCE2AQ5TA79 106 aaPredicted RBP3.61□□□□□ -1.83
ZNF550-203ENST00000376230 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
ZNF550-203ENST00000376230 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
ZNF550-203ENST00000376230 SPRR2FQ96RM1 72 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms