RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 KMT2AQ03164 3969 aa8.16□□□□□ -1.1
VARS-215ENST00000375663 PRKDCP78527 4128 aaKnown RBP8.15□□□□□ -1.1
VARS-215ENST00000375663 DNAH8Q96JB1 4490 aa8.13□□□□□ -1.11
VARS-215ENST00000375663 FRAS1Q86XX4 4008 aa8.09□□□□□ -1.11
VARS-215ENST00000375663 KRTAP3-3Q9BYR6 98 aa8.09□□□□□ -1.11
VARS-215ENST00000375663 KRTAP3-2Q9BYR7 98 aa8.08□□□□□ -1.12
VARS-215ENST00000375663 DNAH17Q9UFH2 4485 aa8.08□□□□□ -1.12
VARS-215ENST00000375663 KRTAP10-10P60014 251 aa8.04□□□□□ -1.12
VARS-215ENST00000375663 DNAH2Q9P225 4427 aa8□□□□□ -1.13
VARS-215ENST00000375663 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
VARS-215ENST00000375663 LRP1BQ9NZR2 4599 aa7.98□□□□□ -1.13
VARS-215ENST00000375663 DNHD1Q96M86 4753 aa7.98□□□□□ -1.13
VARS-215ENST00000375663 HECTD4Q9Y4D8 3996 aa7.97□□□□□ -1.13
VARS-215ENST00000375663 DYNC2H1Q8NCM8 4307 aaKnown RBP7.94□□□□□ -1.14
VARS-215ENST00000375663 DNAH6Q9C0G6 4158 aa7.92□□□□□ -1.14
VARS-215ENST00000375663 DNAH5Q8TE73 4624 aa7.89□□□□□ -1.15
VARS-215ENST00000375663 MT1HL1P0DM35 61 aa7.88□□□□□ -1.15
VARS-215ENST00000375663 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
VARS-215ENST00000375663 FAT1Q14517 4588 aa7.79□□□□□ -1.16
VARS-215ENST00000375663 VPS13BQ7Z7G8 4022 aa7.78□□□□□ -1.16
VARS-215ENST00000375663 ALMS1Q8TCU4 4167 aa7.72□□□□□ -1.17
VARS-215ENST00000375663 DYNC1H1Q14204 4646 aaKnown RBP7.68□□□□□ -1.18
VARS-215ENST00000375663 HYDINQ4G0P3 5121 aa7.68□□□□□ -1.18
VARS-215ENST00000375663 KRTAP4-5Q9BYR2 181 aa7.58□□□□□ -1.2
VARS-215ENST00000375663 PRO2289Q9P1D8 64 aa7.57□□□□□ -1.2
VARS-215ENST00000375663 PKHD1P08F94 4074 aa7.56□□□□□ -1.2
VARS-215ENST00000375663 SACSQ9NZJ4 4579 aa7.54□□□□□ -1.2
VARS-215ENST00000375663 FAT2Q9NYQ8 4349 aa7.5□□□□□ -1.21
VARS-215ENST00000375663 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
VARS-215ENST00000375663 MYCBP2O75592 4640 aa7.48□□□□□ -1.21
VARS-215ENST00000375663 PKD1P98161 4303 aa7.46□□□□□ -1.22
VARS-215ENST00000375663 LRP1Q07954 4544 aaKnown RBP7.41□□□□□ -1.22
VARS-215ENST00000375663 APOBP04114 4563 aaKnown RBP7.39□□□□□ -1.23
VARS-215ENST00000375663 KIAA1109Q2LD37 5005 aa7.23□□□□□ -1.25
VARS-215ENST00000375663 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
VARS-215ENST00000375663 RYR1P21817 5038 aa7.21□□□□□ -1.26
VARS-215ENST00000375663 FAT3Q8TDW7 4589 aa7.2□□□□□ -1.26
VARS-215ENST00000375663 RYR2Q92736 4967 aa7.18□□□□□ -1.26
VARS-215ENST00000375663 KRTAP4-1Q9BYQ7 146 aa7.17□□□□□ -1.26
VARS-215ENST00000375663 KMT2CQ8NEZ4 4911 aaKnown RBP7.17□□□□□ -1.26
VARS-215ENST00000375663 RYR3Q15413 4870 aa7.14□□□□□ -1.27
VARS-215ENST00000375663 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
VARS-215ENST00000375663 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
VARS-215ENST00000375663 LCE3AQ5TA76 89 aa7.1□□□□□ -1.27
VARS-215ENST00000375663 HSPG2P98160 4391 aa7.06□□□□□ -1.28
VARS-215ENST00000375663 INE1O15225 51 aa7.05□□□□□ -1.28
VARS-215ENST00000375663 KRTAP12-3P60328 96 aa7.04□□□□□ -1.28
VARS-215ENST00000375663 LRP2P98164 4655 aa7.03□□□□□ -1.28
VARS-215ENST00000375663 PKHD1L1Q86WI1 4243 aa7.02□□□□□ -1.29
VARS-215ENST00000375663 TNXBP22105 4242 aa6.93□□□□□ -1.3
VARS-215ENST00000375663 CRCT1Q9UGL9 99 aa6.87□□□□□ -1.31
VARS-215ENST00000375663 LPAP08519 4548 aa6.85□□□□□ -1.31
VARS-215ENST00000375663 SPRR2GQ9BYE4 73 aa6.8□□□□□ -1.32
VARS-215ENST00000375663 MT1HP80294 61 aa6.7□□□□□ -1.34
VARS-215ENST00000375663 MT2AP02795 61 aa6.69□□□□□ -1.34
VARS-215ENST00000375663 EPPK1P58107 5090 aaKnown RBP6.69□□□□□ -1.34
VARS-215ENST00000375663 HERC2O95714 4834 aa6.63□□□□□ -1.35
VARS-215ENST00000375663 MT1FP04733 61 aa6.62□□□□□ -1.35
VARS-215ENST00000375663 ABCA13Q86UQ4 5058 aa6.61□□□□□ -1.35
VARS-215ENST00000375663 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
VARS-215ENST00000375663 KRTAP19-1Q8IUB9 90 aa6.54□□□□□ -1.36
VARS-215ENST00000375663 PCLOQ9Y6V0 5065 aa6.41□□□□□ -1.38
VARS-215ENST00000375663 MUC2Q02817 5179 aa6.41□□□□□ -1.38
VARS-215ENST00000375663 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
VARS-215ENST00000375663 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
VARS-215ENST00000375663 KRTAP19-8Q3LI54 63 aa6.35□□□□□ -1.39
VARS-215ENST00000375663 KRTAP19-2Q3LHN2 52 aa6.32□□□□□ -1.4
VARS-215ENST00000375663 LCE3CQ5T5A8 94 aa6.29□□□□□ -1.4
VARS-215ENST00000375663 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
VARS-215ENST00000375663 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
VARS-215ENST00000375663 MT1XP80297 61 aa6.26□□□□□ -1.41
VARS-215ENST00000375663 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
VARS-215ENST00000375663 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
VARS-215ENST00000375663 SYNE1Q8NF91 8797 aaKnown RBP6.23□□□□□ -1.41
VARS-215ENST00000375663 MT1BP07438 61 aa6.21□□□□□ -1.42
VARS-215ENST00000375663 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
VARS-215ENST00000375663 BIRC6Q9NR09 4857 aa6.2□□□□□ -1.42
VARS-215ENST00000375663 HERC1Q15751 4861 aa6.2□□□□□ -1.42
VARS-215ENST00000375663 KRTAP9-8Q9BYQ0 159 aa6.19□□□□□ -1.42
VARS-215ENST00000375663 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.42
VARS-215ENST00000375663 FSIP2Q5CZC0 6907 aa6.15□□□□□ -1.43
VARS-215ENST00000375663 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
VARS-215ENST00000375663 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
VARS-215ENST00000375663 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
VARS-215ENST00000375663 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
VARS-215ENST00000375663 HMCN2Q8NDA2 5059 aa5.95□□□□□ -1.46
VARS-215ENST00000375663 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
VARS-215ENST00000375663 KRTAP4-8Q9BYQ9 185 aa5.94□□□□□ -1.46
VARS-215ENST00000375663 UBR4Q5T4S7 5183 aa5.93□□□□□ -1.46
VARS-215ENST00000375663 OBSCNQ5VST9 7968 aa5.92□□□□□ -1.46
VARS-215ENST00000375663 LCE2BO14633 110 aa5.72□□□□□ -1.49
VARS-215ENST00000375663 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
VARS-215ENST00000375663 MT1GP13640 62 aa5.68□□□□□ -1.5
VARS-215ENST00000375663 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
VARS-215ENST00000375663 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
VARS-215ENST00000375663 MT1LQ93083 61 aa5.59□□□□□ -1.51
VARS-215ENST00000375663 MT1EP04732 61 aa5.53□□□□□ -1.52
VARS-215ENST00000375663 SPRR2EP22531 72 aa5.53□□□□□ -1.52
VARS-215ENST00000375663 SPRR2BP35325 72 aa5.53□□□□□ -1.52
VARS-215ENST00000375663 SPRR2AP35326 72 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms