RNA–Protein interactions for RNA: ENST00000375436.8

RCC2-202, Transcript of regulator of chromosome condensation 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC2, Length 4,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC2-202ENST00000375436 ALMS1Q8TCU4 4167 aa8.02□□□□□ -1.13
RCC2-202ENST00000375436 LRP1BQ9NZR2 4599 aa8.01□□□□□ -1.13
RCC2-202ENST00000375436 PLAC4Q8WY50 150 aa7.97□□□□□ -1.13
RCC2-202ENST00000375436 KRTAP3-1Q9BYR8 98 aa7.94□□□□□ -1.14
RCC2-202ENST00000375436 HYDINQ4G0P3 5121 aa7.93□□□□□ -1.14
RCC2-202ENST00000375436 DNAH5Q8TE73 4624 aa7.91□□□□□ -1.14
RCC2-202ENST00000375436 KRTAP10-8P60410 259 aa7.91□□□□□ -1.14
RCC2-202ENST00000375436 VPS13BQ7Z7G8 4022 aa7.83□□□□□ -1.16
RCC2-202ENST00000375436 FAT1Q14517 4588 aa7.8□□□□□ -1.16
RCC2-202ENST00000375436 SACSQ9NZJ4 4579 aa7.79□□□□□ -1.16
RCC2-202ENST00000375436 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
RCC2-202ENST00000375436 FAT2Q9NYQ8 4349 aa7.77□□□□□ -1.16
RCC2-202ENST00000375436 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
RCC2-202ENST00000375436 PKD1P98161 4303 aa7.74□□□□□ -1.17
RCC2-202ENST00000375436 TNP1P09430 55 aa7.74□□□□□ -1.17
RCC2-202ENST00000375436 KRTAP13-4Q3LI77 160 aa7.74□□□□□ -1.17
RCC2-202ENST00000375436 DYNC1H1Q14204 4646 aaKnown RBP7.72□□□□□ -1.17
RCC2-202ENST00000375436 PKHD1P08F94 4074 aa7.7□□□□□ -1.18
RCC2-202ENST00000375436 RYR2Q92736 4967 aa7.62□□□□□ -1.19
RCC2-202ENST00000375436 KRTAP10-4P60372 401 aaPredicted RBP7.61□□□□□ -1.19
RCC2-202ENST00000375436 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
RCC2-202ENST00000375436 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
RCC2-202ENST00000375436 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
RCC2-202ENST00000375436 MYCBP2O75592 4640 aa7.59□□□□□ -1.19
RCC2-202ENST00000375436 KMT2CQ8NEZ4 4911 aaKnown RBP7.58□□□□□ -1.2
RCC2-202ENST00000375436 APOBP04114 4563 aaKnown RBP7.52□□□□□ -1.21
RCC2-202ENST00000375436 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
RCC2-202ENST00000375436 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.21
RCC2-202ENST00000375436 MT1HL1P0DM35 61 aa7.45□□□□□ -1.22
RCC2-202ENST00000375436 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
RCC2-202ENST00000375436 KRTAP3-2Q9BYR7 98 aa7.38□□□□□ -1.23
RCC2-202ENST00000375436 PP632Q6XCG6 107 aa7.36□□□□□ -1.23
RCC2-202ENST00000375436 RYR3Q15413 4870 aa7.34□□□□□ -1.23
RCC2-202ENST00000375436 RYR1P21817 5038 aa7.34□□□□□ -1.23
RCC2-202ENST00000375436 KIAA1109Q2LD37 5005 aa7.33□□□□□ -1.24
RCC2-202ENST00000375436 FAT3Q8TDW7 4589 aa7.32□□□□□ -1.24
RCC2-202ENST00000375436 KRTAP17-1Q9BYP8 105 aa7.29□□□□□ -1.24
RCC2-202ENST00000375436 HSPG2P98160 4391 aa7.28□□□□□ -1.24
RCC2-202ENST00000375436 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
RCC2-202ENST00000375436 PKHD1L1Q86WI1 4243 aa7.18□□□□□ -1.26
RCC2-202ENST00000375436 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
RCC2-202ENST00000375436 EPPK1P58107 5090 aaKnown RBP7.13□□□□□ -1.27
RCC2-202ENST00000375436 LRP2P98164 4655 aa7.08□□□□□ -1.28
RCC2-202ENST00000375436 TNXBP22105 4242 aa7.08□□□□□ -1.28
RCC2-202ENST00000375436 PRO2289Q9P1D8 64 aa6.97□□□□□ -1.29
RCC2-202ENST00000375436 LPAP08519 4548 aa6.96□□□□□ -1.3
RCC2-202ENST00000375436 KRTAP4-1Q9BYQ7 146 aa6.91□□□□□ -1.3
RCC2-202ENST00000375436 HERC2O95714 4834 aa6.84□□□□□ -1.31
RCC2-202ENST00000375436 ABCA13Q86UQ4 5058 aa6.83□□□□□ -1.32
RCC2-202ENST00000375436 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
RCC2-202ENST00000375436 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
RCC2-202ENST00000375436 CRCT1Q9UGL9 99 aa6.63□□□□□ -1.35
RCC2-202ENST00000375436 KRTAP10-12P60413 245 aa6.63□□□□□ -1.35
RCC2-202ENST00000375436 PCLOQ9Y6V0 5065 aa6.56□□□□□ -1.36
RCC2-202ENST00000375436 MUC2Q02817 5179 aa6.55□□□□□ -1.36
RCC2-202ENST00000375436 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
RCC2-202ENST00000375436 OBSCNQ5VST9 7968 aa6.51□□□□□ -1.37
RCC2-202ENST00000375436 HERC1Q15751 4861 aa6.45□□□□□ -1.38
RCC2-202ENST00000375436 MUC17Q685J3 4493 aa6.37□□□□□ -1.39
RCC2-202ENST00000375436 MT1HP80294 61 aa6.36□□□□□ -1.39
RCC2-202ENST00000375436 FSIP2Q5CZC0 6907 aa6.36□□□□□ -1.39
RCC2-202ENST00000375436 MT2AP02795 61 aa6.34□□□□□ -1.39
RCC2-202ENST00000375436 MT1FP04733 61 aa6.33□□□□□ -1.4
RCC2-202ENST00000375436 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
RCC2-202ENST00000375436 HMCN2Q8NDA2 5059 aa6.31□□□□□ -1.4
RCC2-202ENST00000375436 KRTAP19-2Q3LHN2 52 aa6.31□□□□□ -1.4
RCC2-202ENST00000375436 FAT4Q6V0I7 4981 aa6.28□□□□□ -1.4
RCC2-202ENST00000375436 RNF213Q63HN8 5207 aa6.18□□□□□ -1.42
RCC2-202ENST00000375436 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
RCC2-202ENST00000375436 FLGP20930 4061 aaPredicted RBP6.15□□□□□ -1.42
RCC2-202ENST00000375436 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
RCC2-202ENST00000375436 UBR4Q5T4S7 5183 aa6.14□□□□□ -1.43
RCC2-202ENST00000375436 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
RCC2-202ENST00000375436 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
RCC2-202ENST00000375436 INE1O15225 51 aa6.05□□□□□ -1.44
RCC2-202ENST00000375436 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
RCC2-202ENST00000375436 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
RCC2-202ENST00000375436 KRTAP19-5Q3LI72 72 aa6□□□□□ -1.45
RCC2-202ENST00000375436 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
RCC2-202ENST00000375436 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
RCC2-202ENST00000375436 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
RCC2-202ENST00000375436 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
RCC2-202ENST00000375436 MT1XP80297 61 aa5.83□□□□□ -1.48
RCC2-202ENST00000375436 MT1BP07438 61 aa5.82□□□□□ -1.48
RCC2-202ENST00000375436 DSTQ03001 7570 aaKnown RBP5.77□□□□□ -1.49
RCC2-202ENST00000375436 LCE3CQ5T5A8 94 aa5.74□□□□□ -1.49
RCC2-202ENST00000375436 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
RCC2-202ENST00000375436 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
RCC2-202ENST00000375436 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.49
RCC2-202ENST00000375436 FCGBPQ9Y6R7 5405 aaPredicted RBP5.7□□□□□ -1.5
RCC2-202ENST00000375436 KRTAP4-7Q9BYR0 210 aa5.64□□□□□ -1.51
RCC2-202ENST00000375436 KRTAP9-3Q9BYQ3 159 aa5.63□□□□□ -1.51
RCC2-202ENST00000375436 USH2AO75445 5202 aa5.63□□□□□ -1.51
RCC2-202ENST00000375436 KMT2DO14686 5537 aa5.55□□□□□ -1.52
RCC2-202ENST00000375436 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
RCC2-202ENST00000375436 LCE2BO14633 110 aa5.53□□□□□ -1.52
RCC2-202ENST00000375436 MT1GP13640 62 aa5.51□□□□□ -1.53
RCC2-202ENST00000375436 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
RCC2-202ENST00000375436 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
RCC2-202ENST00000375436 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms