RNA–Protein interactions for RNA: ENST00000375436.8

RCC2-202, Transcript of regulator of chromosome condensation 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC2, Length 4,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC2-202ENST00000375436 NISCHQ9Y2I1 1504 aa29.01■■■□□ 2.23
RCC2-202ENST00000375436 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
RCC2-202ENST00000375436 SUPT5HO00267 1087 aaKnown RBP26.93■■□□□ 1.9
RCC2-202ENST00000375436 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
RCC2-202ENST00000375436 EHMT2Q96KQ7 1210 aa26.22■■□□□ 1.79
RCC2-202ENST00000375436 FAM9AQ8IZU1 332 aaPredicted RBP25.43■■□□□ 1.66
RCC2-202ENST00000375436 PCGF6Q9BYE7 350 aa25.37■■□□□ 1.65
RCC2-202ENST00000375436 TTBK1Q5TCY1 1321 aaPredicted RBP25.26■■□□□ 1.63
RCC2-202ENST00000375436 CCDC180Q9P1Z9 1646 aa24.84■■□□□ 1.57
RCC2-202ENST00000375436 PPARGC1BQ86YN6 1023 aaKnown RBP24.73■■□□□ 1.55
RCC2-202ENST00000375436 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
RCC2-202ENST00000375436 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
RCC2-202ENST00000375436 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
RCC2-202ENST00000375436 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
RCC2-202ENST00000375436 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
RCC2-202ENST00000375436 APLP2Q06481 763 aa24.26■■□□□ 1.47
RCC2-202ENST00000375436 CHIC1Q5VXU3 224 aa24.25■■□□□ 1.47
RCC2-202ENST00000375436 UBTFP17480 764 aaKnown RBP24.09■■□□□ 1.45
RCC2-202ENST00000375436 HRCP23327 699 aa24.08■■□□□ 1.44
RCC2-202ENST00000375436 YTHDC1Q96MU7 727 aaKnown RBP24.05■■□□□ 1.44
RCC2-202ENST00000375436 ATP1B4Q9UN42 357 aaPredicted RBP23.94■■□□□ 1.42
RCC2-202ENST00000375436 TRIM26Q12899 539 aaPredicted RBP23.85■■□□□ 1.41
RCC2-202ENST00000375436 ABCC9O60706 1549 aa23.78■■□□□ 1.4
RCC2-202ENST00000375436 ZEB1P37275 1124 aaPredicted RBP23.76■■□□□ 1.39
RCC2-202ENST00000375436 DCAF1Q9Y4B6 1507 aa23.7■■□□□ 1.38
RCC2-202ENST00000375436 CENPBP07199 599 aaPredicted RBP23.69■■□□□ 1.38
RCC2-202ENST00000375436 MYO15BQ96JP2 1530 aa23.68■■□□□ 1.38
RCC2-202ENST00000375436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.67■■□□□ 1.38
RCC2-202ENST00000375436 ITGAEP38570 1179 aa23.62■■□□□ 1.37
RCC2-202ENST00000375436 HNRNPUL2Q1KMD3 747 aaKnown RBP23.61■■□□□ 1.37
RCC2-202ENST00000375436 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
RCC2-202ENST00000375436 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
RCC2-202ENST00000375436 CNGB1Q14028 1251 aaPredicted RBP23.28■■□□□ 1.32
RCC2-202ENST00000375436 PABPN1Q86U42 306 aaKnown RBP eCLIP23.26■■□□□ 1.31
RCC2-202ENST00000375436 NACADO15069 1562 aa23.21■■□□□ 1.31
RCC2-202ENST00000375436 DIEXFQ68CQ4 756 aaKnown RBP23.12■■□□□ 1.29
RCC2-202ENST00000375436 RB1CC1Q8TDY2 1594 aa23.02■■□□□ 1.28
RCC2-202ENST00000375436 POLR3GLQ9BT43 218 aa23.01■■□□□ 1.27
RCC2-202ENST00000375436 GTF3C3Q9Y5Q9 886 aa22.98■■□□□ 1.27
RCC2-202ENST00000375436 ERICH6Q7L0X2 663 aa22.95■■□□□ 1.26
RCC2-202ENST00000375436 NEFLP07196 543 aa22.93■■□□□ 1.26
RCC2-202ENST00000375436 BCANQ96GW7 911 aa22.78■■□□□ 1.24
RCC2-202ENST00000375436 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
RCC2-202ENST00000375436 NEUROD1Q13562 356 aa22.77■■□□□ 1.24
RCC2-202ENST00000375436 FAM50AQ14320 339 aaKnown RBP22.75■■□□□ 1.23
RCC2-202ENST00000375436 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
RCC2-202ENST00000375436 SCAF1Q9H7N4 1312 aaKnown RBP22.67■■□□□ 1.22
RCC2-202ENST00000375436 P3H3Q8IVL6 736 aa22.64■■□□□ 1.21
RCC2-202ENST00000375436 ARID3CA6NKF2 412 aa22.58■■□□□ 1.21
RCC2-202ENST00000375436 CSRNP3Q8WYN3 585 aa22.54■■□□□ 1.2
RCC2-202ENST00000375436 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
RCC2-202ENST00000375436 ACIN1Q9UKV3 1341 aaKnown RBP22.51■■□□□ 1.19
RCC2-202ENST00000375436 ZNF316A6NFI3 1004 aaPredicted RBP22.49■■□□□ 1.19
RCC2-202ENST00000375436 MYT1LQ9UL68 1186 aa22.43■■□□□ 1.18
RCC2-202ENST00000375436 TRIM52Q96A61 297 aa22.41■■□□□ 1.18
RCC2-202ENST00000375436 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
RCC2-202ENST00000375436 MYT1Q01538 1121 aa22.4■■□□□ 1.18
RCC2-202ENST00000375436 ZNF326Q5BKZ1 582 aaKnown RBP22.37■■□□□ 1.17
RCC2-202ENST00000375436 WIZO95785 1651 aa22.35■■□□□ 1.17
RCC2-202ENST00000375436 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
RCC2-202ENST00000375436 HIRIP3Q9BW71 556 aaPredicted RBP22.24■■□□□ 1.15
RCC2-202ENST00000375436 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
RCC2-202ENST00000375436 FBLN2P98095 1184 aa22.18■■□□□ 1.14
RCC2-202ENST00000375436 MIER1Q8N108 512 aa22.16■■□□□ 1.14
RCC2-202ENST00000375436 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
RCC2-202ENST00000375436 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.14
RCC2-202ENST00000375436 DDX10Q13206 875 aaKnown RBP22.12■■□□□ 1.13
RCC2-202ENST00000375436 ANP32CO43423 234 aa22.08■■□□□ 1.13
RCC2-202ENST00000375436 TOP2AP11388 1531 aaKnown RBP22.04■■□□□ 1.12
RCC2-202ENST00000375436 SENP3-EIF4A1A0A087X0R7 540 aa22.02■■□□□ 1.12
RCC2-202ENST00000375436 FKBP8Q14318 412 aa21.98■■□□□ 1.11
RCC2-202ENST00000375436 ZNF777Q9ULD5 760 aaPredicted RBP21.97■■□□□ 1.11
RCC2-202ENST00000375436 CHIC2Q9UKJ5 165 aa21.96■■□□□ 1.11
RCC2-202ENST00000375436 CCDC88BA6NC98 1476 aa21.96■■□□□ 1.11
RCC2-202ENST00000375436 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
RCC2-202ENST00000375436 DAXXQ9UER7 740 aaPredicted RBP21.92■■□□□ 1.1
RCC2-202ENST00000375436 IRX6P78412 446 aaPredicted RBP21.9■■□□□ 1.1
RCC2-202ENST00000375436 SALL2Q9Y467 1007 aaPredicted RBP21.88■■□□□ 1.09
RCC2-202ENST00000375436 BCL11AQ9H165 835 aa21.87■■□□□ 1.09
RCC2-202ENST00000375436 BAZ1BQ9UIG0 1483 aaKnown RBP21.86■■□□□ 1.09
RCC2-202ENST00000375436 SOGA1O94964 1423 aa21.85■■□□□ 1.09
RCC2-202ENST00000375436 SMARCA2P51531 1590 aa21.85■■□□□ 1.09
RCC2-202ENST00000375436 CLSPNQ9HAW4 1339 aa21.84■■□□□ 1.09
RCC2-202ENST00000375436 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
RCC2-202ENST00000375436 HNRNPUQ00839 825 aaKnown RBP eCLIP21.82■■□□□ 1.08
RCC2-202ENST00000375436 FAM9BQ8IZU0 186 aa21.81■■□□□ 1.08
RCC2-202ENST00000375436 ATAD2BQ9ULI0 1458 aa21.81■■□□□ 1.08
RCC2-202ENST00000375436 CDK11AQ9UQ88 783 aaPredicted RBP21.75■■□□□ 1.07
RCC2-202ENST00000375436 CLIP1P30622 1438 aa21.74■■□□□ 1.07
RCC2-202ENST00000375436 RTL5Q5HYW3 569 aaPredicted RBP21.7■■□□□ 1.06
RCC2-202ENST00000375436 NPM2Q86SE8 214 aaKnown RBP21.69■■□□□ 1.06
RCC2-202ENST00000375436 TONSLQ96HA7 1378 aa21.68■■□□□ 1.06
RCC2-202ENST00000375436 RUSC2Q8N2Y8 1516 aa21.66■■□□□ 1.06
RCC2-202ENST00000375436 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
RCC2-202ENST00000375436 SIN3AQ96ST3 1273 aa21.64■■□□□ 1.05
RCC2-202ENST00000375436 RRP7BPQ9NSQ0 103 aa21.64■■□□□ 1.05
RCC2-202ENST00000375436 EIF4G1Q04637 1599 aaKnown RBP21.62■■□□□ 1.05
RCC2-202ENST00000375436 TNIKQ9UKE5 1360 aa21.61■■□□□ 1.05
RCC2-202ENST00000375436 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
RCC2-202ENST00000375436 KDM2AQ9Y2K7 1162 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms