RNA–Protein interactions for RNA: ENST00000375147.7

NCBP1-202, Transcript of nuclear cap binding protein subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCBP1, Length 5,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-202ENST00000375147 DNAH1Q9P2D7 4330 aa5.87□□□□□ -1.47
NCBP1-202ENST00000375147 FAT1Q14517 4588 aa5.86□□□□□ -1.47
NCBP1-202ENST00000375147 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
NCBP1-202ENST00000375147 RYR1P21817 5038 aa5.81□□□□□ -1.48
NCBP1-202ENST00000375147 DYNC1H1Q14204 4646 aaKnown RBP5.79□□□□□ -1.48
NCBP1-202ENST00000375147 ALMS1Q8TCU4 4167 aa5.79□□□□□ -1.48
NCBP1-202ENST00000375147 DNAH10Q8IVF4 4471 aa5.78□□□□□ -1.48
NCBP1-202ENST00000375147 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
NCBP1-202ENST00000375147 VPS13DQ5THJ4 4388 aa5.75□□□□□ -1.49
NCBP1-202ENST00000375147 STARD9Q9P2P6 4700 aa5.72□□□□□ -1.49
NCBP1-202ENST00000375147 LRP1BQ9NZR2 4599 aa5.72□□□□□ -1.49
NCBP1-202ENST00000375147 KRTAP10-12P60413 245 aa5.71□□□□□ -1.49
NCBP1-202ENST00000375147 KIAA1109Q2LD37 5005 aa5.7□□□□□ -1.5
NCBP1-202ENST00000375147 DNAH8Q96JB1 4490 aa5.69□□□□□ -1.5
NCBP1-202ENST00000375147 PRKDCP78527 4128 aaKnown RBP5.68□□□□□ -1.5
NCBP1-202ENST00000375147 DNAH17Q9UFH2 4485 aa5.68□□□□□ -1.5
NCBP1-202ENST00000375147 KRTAP4-1Q9BYQ7 146 aa5.67□□□□□ -1.5
NCBP1-202ENST00000375147 SACSQ9NZJ4 4579 aa5.62□□□□□ -1.51
NCBP1-202ENST00000375147 DNAH2Q9P225 4427 aa5.58□□□□□ -1.52
NCBP1-202ENST00000375147 MYCBP2O75592 4640 aa5.57□□□□□ -1.52
NCBP1-202ENST00000375147 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
NCBP1-202ENST00000375147 RYR3Q15413 4870 aa5.54□□□□□ -1.52
NCBP1-202ENST00000375147 LYSTQ99698 3801 aa5.53□□□□□ -1.52
NCBP1-202ENST00000375147 LCE3AQ5TA76 89 aa5.52□□□□□ -1.53
NCBP1-202ENST00000375147 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
NCBP1-202ENST00000375147 KMT2AQ03164 3969 aa5.48□□□□□ -1.53
NCBP1-202ENST00000375147 MT1HP80294 61 aa5.48□□□□□ -1.53
NCBP1-202ENST00000375147 FAT2Q9NYQ8 4349 aa5.48□□□□□ -1.53
NCBP1-202ENST00000375147 DYNC2H1Q8NCM8 4307 aaKnown RBP5.46□□□□□ -1.53
NCBP1-202ENST00000375147 APOBP04114 4563 aaKnown RBP5.45□□□□□ -1.54
NCBP1-202ENST00000375147 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
NCBP1-202ENST00000375147 VPS13BQ7Z7G8 4022 aa5.44□□□□□ -1.54
NCBP1-202ENST00000375147 FAT3Q8TDW7 4589 aa5.42□□□□□ -1.54
NCBP1-202ENST00000375147 MT2AP02795 61 aa5.42□□□□□ -1.54
NCBP1-202ENST00000375147 KRTAP17-1Q9BYP8 105 aa5.4□□□□□ -1.54
NCBP1-202ENST00000375147 ANK2Q01484 3957 aa5.39□□□□□ -1.55
NCBP1-202ENST00000375147 INE1O15225 51 aa5.38□□□□□ -1.55
NCBP1-202ENST00000375147 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
NCBP1-202ENST00000375147 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
NCBP1-202ENST00000375147 KRTAP8-1Q8IUC2 63 aa5.32□□□□□ -1.56
NCBP1-202ENST00000375147 MT1FP04733 61 aa5.32□□□□□ -1.56
NCBP1-202ENST00000375147 DNAH3Q8TD57 4116 aa5.31□□□□□ -1.56
NCBP1-202ENST00000375147 HERC2O95714 4834 aa5.3□□□□□ -1.56
NCBP1-202ENST00000375147 HYDINQ4G0P3 5121 aa5.29□□□□□ -1.56
NCBP1-202ENST00000375147 RYR2Q92736 4967 aa5.23□□□□□ -1.57
NCBP1-202ENST00000375147 LRP2P98164 4655 aa5.2□□□□□ -1.58
NCBP1-202ENST00000375147 DNAH6Q9C0G6 4158 aa5.17□□□□□ -1.58
NCBP1-202ENST00000375147 CMYA5Q8N3K9 4069 aa5.16□□□□□ -1.58
NCBP1-202ENST00000375147 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
NCBP1-202ENST00000375147 PCLOQ9Y6V0 5065 aa5.07□□□□□ -1.6
NCBP1-202ENST00000375147 FRAS1Q86XX4 4008 aa5.06□□□□□ -1.6
NCBP1-202ENST00000375147 BIRC6Q9NR09 4857 aa5.06□□□□□ -1.6
NCBP1-202ENST00000375147 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
NCBP1-202ENST00000375147 PKHD1P08F94 4074 aa5.04□□□□□ -1.6
NCBP1-202ENST00000375147 HECTD4Q9Y4D8 3996 aa5.02□□□□□ -1.61
NCBP1-202ENST00000375147 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
NCBP1-202ENST00000375147 DNAH7Q8WXX0 4024 aa5.02□□□□□ -1.61
NCBP1-202ENST00000375147 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
NCBP1-202ENST00000375147 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
NCBP1-202ENST00000375147 KMT2CQ8NEZ4 4911 aaKnown RBP4.99□□□□□ -1.61
NCBP1-202ENST00000375147 HSPG2P98160 4391 aa4.97□□□□□ -1.61
NCBP1-202ENST00000375147 PKD1P98161 4303 aa4.93□□□□□ -1.62
NCBP1-202ENST00000375147 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
NCBP1-202ENST00000375147 HERC1Q15751 4861 aa4.93□□□□□ -1.62
NCBP1-202ENST00000375147 KRTAP10-7P60409 375 aaPredicted RBP4.92□□□□□ -1.62
NCBP1-202ENST00000375147 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
NCBP1-202ENST00000375147 MT1BP07438 61 aa4.88□□□□□ -1.63
NCBP1-202ENST00000375147 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
NCBP1-202ENST00000375147 MT1XP80297 61 aa4.86□□□□□ -1.63
NCBP1-202ENST00000375147 EPPK1P58107 5090 aaKnown RBP4.86□□□□□ -1.63
NCBP1-202ENST00000375147 LPAP08519 4548 aa4.83□□□□□ -1.64
NCBP1-202ENST00000375147 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
NCBP1-202ENST00000375147 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
NCBP1-202ENST00000375147 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
NCBP1-202ENST00000375147 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
NCBP1-202ENST00000375147 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
NCBP1-202ENST00000375147 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
NCBP1-202ENST00000375147 UBR4Q5T4S7 5183 aa4.73□□□□□ -1.65
NCBP1-202ENST00000375147 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
NCBP1-202ENST00000375147 FSIP2Q5CZC0 6907 aa4.71□□□□□ -1.66
NCBP1-202ENST00000375147 MUC17Q685J3 4493 aa4.67□□□□□ -1.66
NCBP1-202ENST00000375147 SPRR2EP22531 72 aa4.64□□□□□ -1.67
NCBP1-202ENST00000375147 SPRR2BP35325 72 aa4.64□□□□□ -1.67
NCBP1-202ENST00000375147 SPRR2AP35326 72 aa4.64□□□□□ -1.67
NCBP1-202ENST00000375147 LCE2BO14633 110 aa4.62□□□□□ -1.67
NCBP1-202ENST00000375147 PKHD1L1Q86WI1 4243 aa4.6□□□□□ -1.67
NCBP1-202ENST00000375147 LCE2DQ5TA82 110 aaPredicted RBP4.6□□□□□ -1.67
NCBP1-202ENST00000375147 MT1GP13640 62 aa4.56□□□□□ -1.68
NCBP1-202ENST00000375147 FAT4Q6V0I7 4981 aa4.54□□□□□ -1.68
NCBP1-202ENST00000375147 TNXBP22105 4242 aa4.53□□□□□ -1.68
NCBP1-202ENST00000375147 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
NCBP1-202ENST00000375147 RNF213Q63HN8 5207 aa4.52□□□□□ -1.69
NCBP1-202ENST00000375147 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
NCBP1-202ENST00000375147 SPRR2DP22532 72 aa4.47□□□□□ -1.69
NCBP1-202ENST00000375147 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
NCBP1-202ENST00000375147 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
NCBP1-202ENST00000375147 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
NCBP1-202ENST00000375147 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
NCBP1-202ENST00000375147 MUC2Q02817 5179 aa4.38□□□□□ -1.71
NCBP1-202ENST00000375147 MT1LQ93083 61 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms