RNA–Protein interactions for RNA: ENST00000375147.7

NCBP1-202, Transcript of nuclear cap binding protein subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCBP1, Length 5,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-202ENST00000375147 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
NCBP1-202ENST00000375147 NISCHQ9Y2I1 1504 aa23.05■■□□□ 1.28
NCBP1-202ENST00000375147 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
NCBP1-202ENST00000375147 SHROOM4Q9ULL8 1493 aa22.02■■□□□ 1.12
NCBP1-202ENST00000375147 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
NCBP1-202ENST00000375147 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
NCBP1-202ENST00000375147 APLP2Q06481 763 aa20.76■□□□□ 0.91
NCBP1-202ENST00000375147 TRIM41Q8WV44 630 aa20.6■□□□□ 0.89
NCBP1-202ENST00000375147 TTBK1Q5TCY1 1321 aaPredicted RBP20.59■□□□□ 0.89
NCBP1-202ENST00000375147 RANGAP1P46060 587 aaPredicted RBP20.5■□□□□ 0.87
NCBP1-202ENST00000375147 PCGF6Q9BYE7 350 aa20.5■□□□□ 0.87
NCBP1-202ENST00000375147 UBTFP17480 764 aaKnown RBP20.3■□□□□ 0.84
NCBP1-202ENST00000375147 ATP1B4Q9UN42 357 aaPredicted RBP20.23■□□□□ 0.83
NCBP1-202ENST00000375147 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
NCBP1-202ENST00000375147 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
NCBP1-202ENST00000375147 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
NCBP1-202ENST00000375147 ABCC9O60706 1549 aa19.91■□□□□ 0.78
NCBP1-202ENST00000375147 ZEB1P37275 1124 aaPredicted RBP19.89■□□□□ 0.77
NCBP1-202ENST00000375147 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
NCBP1-202ENST00000375147 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
NCBP1-202ENST00000375147 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
NCBP1-202ENST00000375147 TRIM26Q12899 539 aaPredicted RBP19.67■□□□□ 0.74
NCBP1-202ENST00000375147 CENPBP07199 599 aaPredicted RBP19.59■□□□□ 0.73
NCBP1-202ENST00000375147 ITGAEP38570 1179 aa19.59■□□□□ 0.73
NCBP1-202ENST00000375147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.73
NCBP1-202ENST00000375147 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.73
NCBP1-202ENST00000375147 YTHDC1Q96MU7 727 aaKnown RBP19.39■□□□□ 0.69
NCBP1-202ENST00000375147 MYT1LQ9UL68 1186 aa19.37■□□□□ 0.69
NCBP1-202ENST00000375147 HRCP23327 699 aa19.33■□□□□ 0.69
NCBP1-202ENST00000375147 NEFLP07196 543 aa19.18■□□□□ 0.66
NCBP1-202ENST00000375147 POLR3GLQ9BT43 218 aa19.18■□□□□ 0.66
NCBP1-202ENST00000375147 FAM50AQ14320 339 aaKnown RBP19.11■□□□□ 0.65
NCBP1-202ENST00000375147 FBLN2P98095 1184 aa19.05■□□□□ 0.64
NCBP1-202ENST00000375147 CNGB1Q14028 1251 aaPredicted RBP19.05■□□□□ 0.64
NCBP1-202ENST00000375147 ZCCHC6Q5VYS8 1495 aaKnown RBP19.04■□□□□ 0.64
NCBP1-202ENST00000375147 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
NCBP1-202ENST00000375147 SCRIBQ14160 1630 aa19.02■□□□□ 0.64
NCBP1-202ENST00000375147 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.63
NCBP1-202ENST00000375147 TRIM52Q96A61 297 aa18.93■□□□□ 0.62
NCBP1-202ENST00000375147 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
NCBP1-202ENST00000375147 NEUROD1Q13562 356 aa18.87■□□□□ 0.61
NCBP1-202ENST00000375147 DIEXFQ68CQ4 756 aaKnown RBP18.84■□□□□ 0.61
NCBP1-202ENST00000375147 ARID3CA6NKF2 412 aa18.83■□□□□ 0.6
NCBP1-202ENST00000375147 SLC4A1APQ9BWU0 796 aaKnown RBP18.77■□□□□ 0.6
NCBP1-202ENST00000375147 CCDC180Q9P1Z9 1646 aa18.76■□□□□ 0.59
NCBP1-202ENST00000375147 ZNF326Q5BKZ1 582 aaKnown RBP18.69■□□□□ 0.58
NCBP1-202ENST00000375147 ZNF777Q9ULD5 760 aaPredicted RBP18.6■□□□□ 0.57
NCBP1-202ENST00000375147 CDK11AQ9UQ88 783 aaPredicted RBP18.56■□□□□ 0.56
NCBP1-202ENST00000375147 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
NCBP1-202ENST00000375147 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
NCBP1-202ENST00000375147 ZNF316A6NFI3 1004 aaPredicted RBP18.49■□□□□ 0.55
NCBP1-202ENST00000375147 ANP32CO43423 234 aa18.47■□□□□ 0.55
NCBP1-202ENST00000375147 DAXXQ9UER7 740 aaPredicted RBP18.45■□□□□ 0.54
NCBP1-202ENST00000375147 MYT1Q01538 1121 aa18.39■□□□□ 0.53
NCBP1-202ENST00000375147 NACADO15069 1562 aa18.36■□□□□ 0.53
NCBP1-202ENST00000375147 CHIC2Q9UKJ5 165 aa18.33■□□□□ 0.52
NCBP1-202ENST00000375147 CHMP7Q8WUX9 453 aaPredicted RBP18.32■□□□□ 0.52
NCBP1-202ENST00000375147 CLSPNQ9HAW4 1339 aa18.31■□□□□ 0.52
NCBP1-202ENST00000375147 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
NCBP1-202ENST00000375147 NPM1P06748 294 aaKnown RBP eCLIP18.31■□□□□ 0.52
NCBP1-202ENST00000375147 BCANQ96GW7 911 aa18.29■□□□□ 0.52
NCBP1-202ENST00000375147 GTF3C3Q9Y5Q9 886 aa18.27■□□□□ 0.52
NCBP1-202ENST00000375147 CLIP1P30622 1438 aa18.26■□□□□ 0.51
NCBP1-202ENST00000375147 TONSLQ96HA7 1378 aa18.24■□□□□ 0.51
NCBP1-202ENST00000375147 MTUS2Q5JR59 1369 aa18.23■□□□□ 0.51
NCBP1-202ENST00000375147 BAZ1BQ9UIG0 1483 aaKnown RBP18.23■□□□□ 0.51
NCBP1-202ENST00000375147 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.511e-6■■■■■ 58.5
NCBP1-202ENST00000375147 CHGAP10645 457 aaKnown RBP18.22■□□□□ 0.51
NCBP1-202ENST00000375147 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
NCBP1-202ENST00000375147 TSPY4P0CV99 314 aa18.19■□□□□ 0.5
NCBP1-202ENST00000375147 TSPY10P0CW01 314 aa18.19■□□□□ 0.5
NCBP1-202ENST00000375147 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
NCBP1-202ENST00000375147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.18■□□□□ 0.52e-6■■■□□ 14.7
NCBP1-202ENST00000375147 MYO15BQ96JP2 1530 aa18.18■□□□□ 0.5
NCBP1-202ENST00000375147 EEA1Q15075 1411 aa18.15■□□□□ 0.5
NCBP1-202ENST00000375147 DDX10Q13206 875 aaKnown RBP18.14■□□□□ 0.49
NCBP1-202ENST00000375147 STAG3Q9UJ98 1225 aa18.11■□□□□ 0.49
NCBP1-202ENST00000375147 CEP162Q5TB80 1403 aa18.1■□□□□ 0.49
NCBP1-202ENST00000375147 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
NCBP1-202ENST00000375147 GOLGA3Q08378 1498 aa18.09■□□□□ 0.49
NCBP1-202ENST00000375147 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
NCBP1-202ENST00000375147 SLC24A1O60721 1099 aa18.07■□□□□ 0.48
NCBP1-202ENST00000375147 NEFMP07197 916 aa18.06■□□□□ 0.48
NCBP1-202ENST00000375147 KCNH8Q96L42 1107 aa18.06■□□□□ 0.48
NCBP1-202ENST00000375147 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
NCBP1-202ENST00000375147 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
NCBP1-202ENST00000375147 ACIN1Q9UKV3 1341 aaKnown RBP18.05■□□□□ 0.48
NCBP1-202ENST00000375147 KDM2AQ9Y2K7 1162 aa18.04■□□□□ 0.48
NCBP1-202ENST00000375147 PLEKHD1A6NEE1 506 aa18.03■□□□□ 0.48
NCBP1-202ENST00000375147 CANXP27824 592 aaKnown RBP18.02■□□□□ 0.47
NCBP1-202ENST00000375147 BCL11AQ9H165 835 aa18.01■□□□□ 0.47
NCBP1-202ENST00000375147 TNIKQ9UKE5 1360 aa17.99■□□□□ 0.47
NCBP1-202ENST00000375147 HIRIP3Q9BW71 556 aaPredicted RBP17.99■□□□□ 0.47
NCBP1-202ENST00000375147 ZBTB47Q9UFB7 747 aaPredicted RBP17.98■□□□□ 0.47
NCBP1-202ENST00000375147 FAM9BQ8IZU0 186 aa17.97■□□□□ 0.47
NCBP1-202ENST00000375147 HNRNPUQ00839 825 aaKnown RBP eCLIP17.96■□□□□ 0.47
NCBP1-202ENST00000375147 RTL5Q5HYW3 569 aaPredicted RBP17.96■□□□□ 0.46
NCBP1-202ENST00000375147 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
NCBP1-202ENST00000375147 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
NCBP1-202ENST00000375147 CFDP1Q9UEE9 299 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms