RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 A8MUU9 505 aa5.92□□□□□ -1.46
CXCL12-203ENST00000374429 RYR1P21817 5038 aa5.9□□□□□ -1.47
CXCL12-203ENST00000374429 RYR2Q92736 4967 aa5.9□□□□□ -1.47
CXCL12-203ENST00000374429 KRTAP13-3Q3SY46 172 aa5.87□□□□□ -1.47
CXCL12-203ENST00000374429 DMAC1Q96GE9 116 aa5.85□□□□□ -1.47
CXCL12-203ENST00000374429 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
CXCL12-203ENST00000374429 LCE2BO14633 110 aa5.83□□□□□ -1.48
CXCL12-203ENST00000374429 EPPK1P58107 5090 aaKnown RBP5.82□□□□□ -1.48
CXCL12-203ENST00000374429 C20orf166-AS1Q96NR2 134 aa5.81□□□□□ -1.48
CXCL12-203ENST00000374429 KRTAP10-4P60372 401 aaPredicted RBP5.8□□□□□ -1.48
CXCL12-203ENST00000374429 K7ERS5 55 aa5.79□□□□□ -1.48
CXCL12-203ENST00000374429 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
CXCL12-203ENST00000374429 HSPG2P98160 4391 aa5.77□□□□□ -1.49
CXCL12-203ENST00000374429 A0A0D9SG42 100 aa5.77□□□□□ -1.49
CXCL12-203ENST00000374429 LUZP6Q538Z0 58 aa5.75□□□□□ -1.49
CXCL12-203ENST00000374429 LRP2P98164 4655 aa5.73□□□□□ -1.49
CXCL12-203ENST00000374429 LCE2CQ5TA81 110 aa5.73□□□□□ -1.49
CXCL12-203ENST00000374429 LPAP08519 4548 aa5.72□□□□□ -1.49
CXCL12-203ENST00000374429 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
CXCL12-203ENST00000374429 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
CXCL12-203ENST00000374429 KRTAP10-8P60410 259 aa5.68□□□□□ -1.5
CXCL12-203ENST00000374429 ABCA13Q86UQ4 5058 aa5.68□□□□□ -1.5
CXCL12-203ENST00000374429 XP32Q5T750 250 aa5.68□□□□□ -1.5
CXCL12-203ENST00000374429 MUC2Q02817 5179 aa5.67□□□□□ -1.5
CXCL12-203ENST00000374429 H0YAA0 97 aa5.66□□□□□ -1.5
CXCL12-203ENST00000374429 A0A1B0GU33 70 aa5.64□□□□□ -1.51
CXCL12-203ENST00000374429 RPS29P62273 56 aaKnown RBP5.62□□□□□ -1.51
CXCL12-203ENST00000374429 COX6B2Q6YFQ2 88 aa5.62□□□□□ -1.51
CXCL12-203ENST00000374429 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
CXCL12-203ENST00000374429 MT1HL1P0DM35 61 aa5.58□□□□□ -1.52
CXCL12-203ENST00000374429 RPL37P61927 97 aaKnown RBP5.58□□□□□ -1.52
CXCL12-203ENST00000374429 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
CXCL12-203ENST00000374429 S4R3F8 94 aa5.55□□□□□ -1.52
CXCL12-203ENST00000374429 HERC2O95714 4834 aa5.53□□□□□ -1.52
CXCL12-203ENST00000374429 TNXBP22105 4242 aa5.53□□□□□ -1.52
CXCL12-203ENST00000374429 H1FX-AS1Q4G0G2 97 aa5.52□□□□□ -1.53
CXCL12-203ENST00000374429 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
CXCL12-203ENST00000374429 TPRXLQ17RH7 258 aa5.49□□□□□ -1.53
CXCL12-203ENST00000374429 HERC1Q15751 4861 aa5.47□□□□□ -1.53
CXCL12-203ENST00000374429 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
CXCL12-203ENST00000374429 RNF213Q63HN8 5207 aa5.43□□□□□ -1.54
CXCL12-203ENST00000374429 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
CXCL12-203ENST00000374429 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
CXCL12-203ENST00000374429 FAT4Q6V0I7 4981 aa5.35□□□□□ -1.55
CXCL12-203ENST00000374429 M0QZ58 72 aa5.34□□□□□ -1.55
CXCL12-203ENST00000374429 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
CXCL12-203ENST00000374429 R4GN34 69 aa5.32□□□□□ -1.56
CXCL12-203ENST00000374429 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
CXCL12-203ENST00000374429 KRTAP4-1Q9BYQ7 146 aa5.3□□□□□ -1.56
CXCL12-203ENST00000374429 M0R2T5 61 aa5.28□□□□□ -1.56
CXCL12-203ENST00000374429 UBR4Q5T4S7 5183 aa5.26□□□□□ -1.57
CXCL12-203ENST00000374429 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
CXCL12-203ENST00000374429 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.58
CXCL12-203ENST00000374429 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
CXCL12-203ENST00000374429 BIRC6Q9NR09 4857 aa5.13□□□□□ -1.59
CXCL12-203ENST00000374429 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
CXCL12-203ENST00000374429 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
CXCL12-203ENST00000374429 MUC17Q685J3 4493 aa4.98□□□□□ -1.61
CXCL12-203ENST00000374429 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
CXCL12-203ENST00000374429 KRTAP10-10P60014 251 aa4.92□□□□□ -1.62
CXCL12-203ENST00000374429 USH2AO75445 5202 aa4.84□□□□□ -1.63
CXCL12-203ENST00000374429 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
CXCL12-203ENST00000374429 KRTAP19-2Q3LHN2 52 aa4.8□□□□□ -1.64
CXCL12-203ENST00000374429 PRO2289Q9P1D8 64 aa4.79□□□□□ -1.64
CXCL12-203ENST00000374429 MT1HP80294 61 aa4.72□□□□□ -1.65
CXCL12-203ENST00000374429 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
CXCL12-203ENST00000374429 TNP1P09430 55 aa4.68□□□□□ -1.66
CXCL12-203ENST00000374429 MT1FP04733 61 aa4.67□□□□□ -1.66
CXCL12-203ENST00000374429 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
CXCL12-203ENST00000374429 KMT2DO14686 5537 aa4.63□□□□□ -1.67
CXCL12-203ENST00000374429 MT2AP02795 61 aa4.62□□□□□ -1.67
CXCL12-203ENST00000374429 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.68
CXCL12-203ENST00000374429 INE1O15225 51 aa4.53□□□□□ -1.68
CXCL12-203ENST00000374429 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
CXCL12-203ENST00000374429 LCE3AQ5TA76 89 aa4.48□□□□□ -1.69
CXCL12-203ENST00000374429 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.7
CXCL12-203ENST00000374429 MT1BP07438 61 aa4.35□□□□□ -1.71
CXCL12-203ENST00000374429 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
CXCL12-203ENST00000374429 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
CXCL12-203ENST00000374429 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
CXCL12-203ENST00000374429 KRTAP10-12P60413 245 aa4.31□□□□□ -1.72
CXCL12-203ENST00000374429 MT1XP80297 61 aa4.31□□□□□ -1.72
CXCL12-203ENST00000374429 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
CXCL12-203ENST00000374429 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
CXCL12-203ENST00000374429 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
CXCL12-203ENST00000374429 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
CXCL12-203ENST00000374429 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
CXCL12-203ENST00000374429 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
CXCL12-203ENST00000374429 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
CXCL12-203ENST00000374429 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
CXCL12-203ENST00000374429 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
CXCL12-203ENST00000374429 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
CXCL12-203ENST00000374429 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
CXCL12-203ENST00000374429 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.76
CXCL12-203ENST00000374429 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
CXCL12-203ENST00000374429 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
CXCL12-203ENST00000374429 KRTAP8-1Q8IUC2 63 aa4.05□□□□□ -1.76
CXCL12-203ENST00000374429 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
CXCL12-203ENST00000374429 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
CXCL12-203ENST00000374429 KRTAP9-6A0A140TA67 174 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms