RNA–Protein interactions for RNA: ENST00000373109.6

SPOCK2-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPOCK2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-202ENST00000373109 AKAP9Q99996 3911 aa6.65□□□□□ -1.35
SPOCK2-202ENST00000373109 DNAH9Q9NYC9 4486 aa6.61□□□□□ -1.35
SPOCK2-202ENST00000373109 KRTAP23-1A1A580 65 aa6.6□□□□□ -1.35
SPOCK2-202ENST00000373109 ZNF469Q96JG9 3925 aaPredicted RBP6.53□□□□□ -1.36
SPOCK2-202ENST00000373109 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
SPOCK2-202ENST00000373109 CSMD3Q7Z407 3707 aa6.43□□□□□ -1.38
SPOCK2-202ENST00000373109 DNAH1Q9P2D7 4330 aa6.35□□□□□ -1.39
SPOCK2-202ENST00000373109 PLECQ15149 4684 aaKnown RBP6.34□□□□□ -1.39
SPOCK2-202ENST00000373109 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
SPOCK2-202ENST00000373109 DNAH5Q8TE73 4624 aa6.31□□□□□ -1.4
SPOCK2-202ENST00000373109 DNAH10Q8IVF4 4471 aa6.28□□□□□ -1.4
SPOCK2-202ENST00000373109 DNAH17Q9UFH2 4485 aa6.27□□□□□ -1.41
SPOCK2-202ENST00000373109 DNAH11Q96DT5 4516 aa6.26□□□□□ -1.41
SPOCK2-202ENST00000373109 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
SPOCK2-202ENST00000373109 ANK2Q01484 3957 aa6.18□□□□□ -1.42
SPOCK2-202ENST00000373109 FAT1Q14517 4588 aa6.16□□□□□ -1.42
SPOCK2-202ENST00000373109 DNHD1Q96M86 4753 aa6.16□□□□□ -1.42
SPOCK2-202ENST00000373109 DNAH3Q8TD57 4116 aa6.15□□□□□ -1.42
SPOCK2-202ENST00000373109 KRTAP4-1Q9BYQ7 146 aa6.14□□□□□ -1.43
SPOCK2-202ENST00000373109 STARD9Q9P2P6 4700 aa6.13□□□□□ -1.43
SPOCK2-202ENST00000373109 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
SPOCK2-202ENST00000373109 DNAH2Q9P225 4427 aa6.1□□□□□ -1.43
SPOCK2-202ENST00000373109 DYNC2H1Q8NCM8 4307 aaKnown RBP6.06□□□□□ -1.44
SPOCK2-202ENST00000373109 LRP1BQ9NZR2 4599 aa6.05□□□□□ -1.44
SPOCK2-202ENST00000373109 FAT2Q9NYQ8 4349 aa6□□□□□ -1.45
SPOCK2-202ENST00000373109 DNAH6Q9C0G6 4158 aa6□□□□□ -1.45
SPOCK2-202ENST00000373109 KRTAP17-1Q9BYP8 105 aa6□□□□□ -1.45
SPOCK2-202ENST00000373109 PRKDCP78527 4128 aaKnown RBP5.99□□□□□ -1.45
SPOCK2-202ENST00000373109 MT2AP02795 61 aa5.99□□□□□ -1.45
SPOCK2-202ENST00000373109 MT1HP80294 61 aa5.99□□□□□ -1.45
SPOCK2-202ENST00000373109 DNAH8Q96JB1 4490 aa5.98□□□□□ -1.45
SPOCK2-202ENST00000373109 SACSQ9NZJ4 4579 aa5.98□□□□□ -1.45
SPOCK2-202ENST00000373109 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
SPOCK2-202ENST00000373109 KRTAP19-5Q3LI72 72 aa5.95□□□□□ -1.46
SPOCK2-202ENST00000373109 CMYA5Q8N3K9 4069 aa5.94□□□□□ -1.46
SPOCK2-202ENST00000373109 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
SPOCK2-202ENST00000373109 MT1FP04733 61 aa5.87□□□□□ -1.47
SPOCK2-202ENST00000373109 SPRR2FQ96RM1 72 aa5.86□□□□□ -1.47
SPOCK2-202ENST00000373109 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
SPOCK2-202ENST00000373109 KMT2AQ03164 3969 aa5.82□□□□□ -1.48
SPOCK2-202ENST00000373109 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
SPOCK2-202ENST00000373109 RYR1P21817 5038 aa5.78□□□□□ -1.48
SPOCK2-202ENST00000373109 DNAH7Q8WXX0 4024 aa5.72□□□□□ -1.49
SPOCK2-202ENST00000373109 VPS13BQ7Z7G8 4022 aa5.71□□□□□ -1.5
SPOCK2-202ENST00000373109 APOBP04114 4563 aaKnown RBP5.68□□□□□ -1.5
SPOCK2-202ENST00000373109 SPRR2EP22531 72 aa5.68□□□□□ -1.5
SPOCK2-202ENST00000373109 SPRR2BP35325 72 aa5.68□□□□□ -1.5
SPOCK2-202ENST00000373109 SPRR2AP35326 72 aa5.68□□□□□ -1.5
SPOCK2-202ENST00000373109 BIRC6Q9NR09 4857 aa5.66□□□□□ -1.5
SPOCK2-202ENST00000373109 RYR3Q15413 4870 aa5.65□□□□□ -1.5
SPOCK2-202ENST00000373109 RYR2Q92736 4967 aa5.65□□□□□ -1.5
SPOCK2-202ENST00000373109 HECTD4Q9Y4D8 3996 aa5.63□□□□□ -1.51
SPOCK2-202ENST00000373109 MYCBP2O75592 4640 aa5.59□□□□□ -1.51
SPOCK2-202ENST00000373109 KRTAP9-6A0A140TA67 174 aa5.59□□□□□ -1.51
SPOCK2-202ENST00000373109 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
SPOCK2-202ENST00000373109 LYSTQ99698 3801 aa5.57□□□□□ -1.52
SPOCK2-202ENST00000373109 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
SPOCK2-202ENST00000373109 FRAS1Q86XX4 4008 aa5.56□□□□□ -1.52
SPOCK2-202ENST00000373109 KIAA1109Q2LD37 5005 aa5.56□□□□□ -1.52
SPOCK2-202ENST00000373109 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
SPOCK2-202ENST00000373109 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
SPOCK2-202ENST00000373109 SPRR2DP22532 72 aa5.53□□□□□ -1.52
SPOCK2-202ENST00000373109 FAT3Q8TDW7 4589 aa5.52□□□□□ -1.53
SPOCK2-202ENST00000373109 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
SPOCK2-202ENST00000373109 HERC2O95714 4834 aa5.46□□□□□ -1.54
SPOCK2-202ENST00000373109 HYDINQ4G0P3 5121 aa5.46□□□□□ -1.54
SPOCK2-202ENST00000373109 MT1GP13640 62 aa5.45□□□□□ -1.54
SPOCK2-202ENST00000373109 MT1XP80297 61 aa5.45□□□□□ -1.54
SPOCK2-202ENST00000373109 HSPG2P98160 4391 aa5.42□□□□□ -1.54
SPOCK2-202ENST00000373109 LRP1Q07954 4544 aaKnown RBP5.4□□□□□ -1.54
SPOCK2-202ENST00000373109 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
SPOCK2-202ENST00000373109 LCE2BO14633 110 aa5.37□□□□□ -1.55
SPOCK2-202ENST00000373109 HERC1Q15751 4861 aa5.36□□□□□ -1.55
SPOCK2-202ENST00000373109 KRTAP4-8A0A0G2JLE6 195 aa5.34□□□□□ -1.55
SPOCK2-202ENST00000373109 KRTAP4-8Q9BYQ9 185 aa5.34□□□□□ -1.55
SPOCK2-202ENST00000373109 PKD1P98161 4303 aa5.34□□□□□ -1.55
SPOCK2-202ENST00000373109 MT1BP07438 61 aa5.33□□□□□ -1.56
SPOCK2-202ENST00000373109 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
SPOCK2-202ENST00000373109 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
SPOCK2-202ENST00000373109 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
SPOCK2-202ENST00000373109 PKHD1P08F94 4074 aa5.24□□□□□ -1.57
SPOCK2-202ENST00000373109 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
SPOCK2-202ENST00000373109 PKHD1L1Q86WI1 4243 aa5.22□□□□□ -1.57
SPOCK2-202ENST00000373109 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
SPOCK2-202ENST00000373109 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
SPOCK2-202ENST00000373109 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
SPOCK2-202ENST00000373109 LCE2DQ5TA82 110 aaPredicted RBP5.16□□□□□ -1.58
SPOCK2-202ENST00000373109 TNXBP22105 4242 aa5.15□□□□□ -1.59
SPOCK2-202ENST00000373109 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
SPOCK2-202ENST00000373109 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
SPOCK2-202ENST00000373109 KRTAP20-1Q3LI63 56 aa5.12□□□□□ -1.59
SPOCK2-202ENST00000373109 LRP2P98164 4655 aa5.1□□□□□ -1.59
SPOCK2-202ENST00000373109 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.6
SPOCK2-202ENST00000373109 KMT2CQ8NEZ4 4911 aaKnown RBP5.08□□□□□ -1.6
SPOCK2-202ENST00000373109 KRTAP19-2Q3LHN2 52 aa5.07□□□□□ -1.6
SPOCK2-202ENST00000373109 LPAP08519 4548 aa5□□□□□ -1.61
SPOCK2-202ENST00000373109 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
SPOCK2-202ENST00000373109 MT1LQ93083 61 aa4.98□□□□□ -1.61
SPOCK2-202ENST00000373109 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
SPOCK2-202ENST00000373109 ABCA13Q86UQ4 5058 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms