RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 CSMD3Q7Z407 3707 aa7.32□□□□□ -1.24
CHRNA4-201ENST00000370263 DNAH10Q8IVF4 4471 aa7.25□□□□□ -1.25
CHRNA4-201ENST00000370263 KRTAP10-5P60370 271 aa7.24□□□□□ -1.25
CHRNA4-201ENST00000370263 ALMS1Q8TCU4 4167 aa7.23□□□□□ -1.25
CHRNA4-201ENST00000370263 DNAH11Q96DT5 4516 aa7.23□□□□□ -1.25
CHRNA4-201ENST00000370263 DNAH5Q8TE73 4624 aa7.22□□□□□ -1.25
CHRNA4-201ENST00000370263 DNAH1Q9P2D7 4330 aa7.18□□□□□ -1.26
CHRNA4-201ENST00000370263 DNAH9Q9NYC9 4486 aa7.15□□□□□ -1.26
CHRNA4-201ENST00000370263 DNAH2Q9P225 4427 aa7.11□□□□□ -1.27
CHRNA4-201ENST00000370263 KRTAP4-1Q9BYQ7 146 aa7.11□□□□□ -1.27
CHRNA4-201ENST00000370263 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
CHRNA4-201ENST00000370263 AKAP9Q99996 3911 aa7.05□□□□□ -1.28
CHRNA4-201ENST00000370263 DNAH17Q9UFH2 4485 aa7.05□□□□□ -1.28
CHRNA4-201ENST00000370263 PLECQ15149 4684 aaKnown RBP7.03□□□□□ -1.28
CHRNA4-201ENST00000370263 FAT1Q14517 4588 aa6.99□□□□□ -1.29
CHRNA4-201ENST00000370263 KRTAP8-1Q8IUC2 63 aa6.99□□□□□ -1.29
CHRNA4-201ENST00000370263 DNAH8Q96JB1 4490 aa6.97□□□□□ -1.29
CHRNA4-201ENST00000370263 VPS13DQ5THJ4 4388 aa6.93□□□□□ -1.3
CHRNA4-201ENST00000370263 MT2AP02795 61 aa6.9□□□□□ -1.31
CHRNA4-201ENST00000370263 MT1HP80294 61 aa6.88□□□□□ -1.31
CHRNA4-201ENST00000370263 LCE3CQ5T5A8 94 aa6.87□□□□□ -1.31
CHRNA4-201ENST00000370263 ZNF469Q96JG9 3925 aaPredicted RBP6.85□□□□□ -1.31
CHRNA4-201ENST00000370263 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
CHRNA4-201ENST00000370263 SACSQ9NZJ4 4579 aa6.81□□□□□ -1.32
CHRNA4-201ENST00000370263 DYNC1H1Q14204 4646 aaKnown RBP6.78□□□□□ -1.32
CHRNA4-201ENST00000370263 MT1FP04733 61 aa6.76□□□□□ -1.33
CHRNA4-201ENST00000370263 DNAH3Q8TD57 4116 aa6.74□□□□□ -1.33
CHRNA4-201ENST00000370263 LRP1BQ9NZR2 4599 aa6.74□□□□□ -1.33
CHRNA4-201ENST00000370263 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
CHRNA4-201ENST00000370263 SPRR5A0A1B0GTR4 108 aa6.66□□□□□ -1.34
CHRNA4-201ENST00000370263 DYNC2H1Q8NCM8 4307 aaKnown RBP6.66□□□□□ -1.34
CHRNA4-201ENST00000370263 APOBP04114 4563 aaKnown RBP6.62□□□□□ -1.35
CHRNA4-201ENST00000370263 STARD9Q9P2P6 4700 aa6.61□□□□□ -1.35
CHRNA4-201ENST00000370263 ANK2Q01484 3957 aa6.6□□□□□ -1.35
CHRNA4-201ENST00000370263 FAT2Q9NYQ8 4349 aa6.58□□□□□ -1.36
CHRNA4-201ENST00000370263 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
CHRNA4-201ENST00000370263 RYR1P21817 5038 aa6.52□□□□□ -1.37
CHRNA4-201ENST00000370263 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
CHRNA4-201ENST00000370263 KRTAP19-8Q3LI54 63 aa6.5□□□□□ -1.37
CHRNA4-201ENST00000370263 SPRR2FQ96RM1 72 aa6.48□□□□□ -1.37
CHRNA4-201ENST00000370263 VPS13BQ7Z7G8 4022 aa6.46□□□□□ -1.37
CHRNA4-201ENST00000370263 DNHD1Q96M86 4753 aa6.44□□□□□ -1.38
CHRNA4-201ENST00000370263 MT1XP80297 61 aa6.39□□□□□ -1.39
CHRNA4-201ENST00000370263 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
CHRNA4-201ENST00000370263 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
CHRNA4-201ENST00000370263 KMT2AQ03164 3969 aa6.32□□□□□ -1.4
CHRNA4-201ENST00000370263 CMYA5Q8N3K9 4069 aa6.3□□□□□ -1.4
CHRNA4-201ENST00000370263 FRAS1Q86XX4 4008 aa6.29□□□□□ -1.4
CHRNA4-201ENST00000370263 LRP1Q07954 4544 aaKnown RBP6.27□□□□□ -1.41
CHRNA4-201ENST00000370263 PRKDCP78527 4128 aaKnown RBP6.27□□□□□ -1.41
CHRNA4-201ENST00000370263 MT1BP07438 61 aa6.25□□□□□ -1.41
CHRNA4-201ENST00000370263 DNAH6Q9C0G6 4158 aa6.24□□□□□ -1.41
CHRNA4-201ENST00000370263 FAT3Q8TDW7 4589 aa6.24□□□□□ -1.41
CHRNA4-201ENST00000370263 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
CHRNA4-201ENST00000370263 LYSTQ99698 3801 aa6.22□□□□□ -1.41
CHRNA4-201ENST00000370263 RYR3Q15413 4870 aa6.17□□□□□ -1.42
CHRNA4-201ENST00000370263 DNAH7Q8WXX0 4024 aa6.17□□□□□ -1.42
CHRNA4-201ENST00000370263 MT1GP13640 62 aa6.16□□□□□ -1.42
CHRNA4-201ENST00000370263 KRTAP17-1Q9BYP8 105 aa6.15□□□□□ -1.43
CHRNA4-201ENST00000370263 HECTD4Q9Y4D8 3996 aa6.12□□□□□ -1.43
CHRNA4-201ENST00000370263 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
CHRNA4-201ENST00000370263 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
CHRNA4-201ENST00000370263 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
CHRNA4-201ENST00000370263 SPRR2EP22531 72 aa6.05□□□□□ -1.44
CHRNA4-201ENST00000370263 SPRR2BP35325 72 aa6.05□□□□□ -1.44
CHRNA4-201ENST00000370263 SPRR2AP35326 72 aa6.05□□□□□ -1.44
CHRNA4-201ENST00000370263 RYR2Q92736 4967 aa6.03□□□□□ -1.44
CHRNA4-201ENST00000370263 KIAA1109Q2LD37 5005 aa6.03□□□□□ -1.44
CHRNA4-201ENST00000370263 LCE3DQ9BYE3 92 aa6.02□□□□□ -1.45
CHRNA4-201ENST00000370263 LCE2CQ5TA81 110 aa5.96□□□□□ -1.45
CHRNA4-201ENST00000370263 LCE3EQ5T5B0 92 aa5.96□□□□□ -1.46
CHRNA4-201ENST00000370263 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
CHRNA4-201ENST00000370263 HSPG2P98160 4391 aa5.95□□□□□ -1.46
CHRNA4-201ENST00000370263 LRP2P98164 4655 aa5.91□□□□□ -1.46
CHRNA4-201ENST00000370263 HERC1Q15751 4861 aa5.87□□□□□ -1.47
CHRNA4-201ENST00000370263 PKD1P98161 4303 aa5.86□□□□□ -1.47
CHRNA4-201ENST00000370263 SPRR2DP22532 72 aa5.85□□□□□ -1.47
CHRNA4-201ENST00000370263 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
CHRNA4-201ENST00000370263 MT1LQ93083 61 aa5.82□□□□□ -1.48
CHRNA4-201ENST00000370263 LCE2BO14633 110 aa5.82□□□□□ -1.48
CHRNA4-201ENST00000370263 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
CHRNA4-201ENST00000370263 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
CHRNA4-201ENST00000370263 MT1EP04732 61 aa5.72□□□□□ -1.49
CHRNA4-201ENST00000370263 HERC2O95714 4834 aa5.69□□□□□ -1.5
CHRNA4-201ENST00000370263 MUC17Q685J3 4493 aa5.64□□□□□ -1.51
CHRNA4-201ENST00000370263 KMT2CQ8NEZ4 4911 aaKnown RBP5.63□□□□□ -1.51
CHRNA4-201ENST00000370263 LPAP08519 4548 aa5.61□□□□□ -1.51
CHRNA4-201ENST00000370263 PRM1P04553 51 aa5.61□□□□□ -1.51
CHRNA4-201ENST00000370263 HYDINQ4G0P3 5121 aa5.61□□□□□ -1.51
CHRNA4-201ENST00000370263 PKHD1L1Q86WI1 4243 aa5.58□□□□□ -1.52
CHRNA4-201ENST00000370263 PKHD1P08F94 4074 aa5.53□□□□□ -1.52
CHRNA4-201ENST00000370263 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
CHRNA4-201ENST00000370263 MT1MQ8N339 61 aa5.52□□□□□ -1.53
CHRNA4-201ENST00000370263 PCLOQ9Y6V0 5065 aa5.5□□□□□ -1.53
CHRNA4-201ENST00000370263 TNXBP22105 4242 aa5.48□□□□□ -1.53
CHRNA4-201ENST00000370263 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
CHRNA4-201ENST00000370263 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
CHRNA4-201ENST00000370263 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
CHRNA4-201ENST00000370263 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
CHRNA4-201ENST00000370263 MT3P25713 68 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms