RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 KRTAP1-4P0C5Y4 121 aa4.02□□□□□ -1.77
UFL1-201ENST00000369278 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
UFL1-201ENST00000369278 KRTAP3-1Q9BYR8 98 aa4□□□□□ -1.77
UFL1-201ENST00000369278 LRP1BQ9NZR2 4599 aa3.98□□□□□ -1.77
UFL1-201ENST00000369278 VPS13BQ7Z7G8 4022 aa3.96□□□□□ -1.78
UFL1-201ENST00000369278 KRTAP17-1Q9BYP8 105 aa3.95□□□□□ -1.78
UFL1-201ENST00000369278 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
UFL1-201ENST00000369278 DNAH5Q8TE73 4624 aa3.93□□□□□ -1.78
UFL1-201ENST00000369278 J3QL48 77 aa3.93□□□□□ -1.78
UFL1-201ENST00000369278 PKHD1P08F94 4074 aa3.91□□□□□ -1.78
UFL1-201ENST00000369278 Q5VSD8 79 aa3.9□□□□□ -1.79
UFL1-201ENST00000369278 M0R2T5 61 aa3.9□□□□□ -1.79
UFL1-201ENST00000369278 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
UFL1-201ENST00000369278 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
UFL1-201ENST00000369278 PKD1P98161 4303 aa3.87□□□□□ -1.79
UFL1-201ENST00000369278 A0A1B0GVY2 172 aa3.84□□□□□ -1.8
UFL1-201ENST00000369278 HYDINQ4G0P3 5121 aa3.83□□□□□ -1.8
UFL1-201ENST00000369278 RYR3Q15413 4870 aa3.83□□□□□ -1.8
UFL1-201ENST00000369278 XP32Q5T750 250 aa3.82□□□□□ -1.8
UFL1-201ENST00000369278 KMT2CQ8NEZ4 4911 aaKnown RBP3.8□□□□□ -1.8
UFL1-201ENST00000369278 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
UFL1-201ENST00000369278 TNP1P09430 55 aa3.79□□□□□ -1.8
UFL1-201ENST00000369278 SEC61BP60468 96 aaKnown RBP3.79□□□□□ -1.8
UFL1-201ENST00000369278 LCE2BO14633 110 aa3.77□□□□□ -1.81
UFL1-201ENST00000369278 RPS29P62273 56 aaKnown RBP3.77□□□□□ -1.81
UFL1-201ENST00000369278 PKHD1L1Q86WI1 4243 aa3.76□□□□□ -1.81
UFL1-201ENST00000369278 HSPG2P98160 4391 aa3.76□□□□□ -1.81
UFL1-201ENST00000369278 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
UFL1-201ENST00000369278 MYCBP2O75592 4640 aa3.73□□□□□ -1.81
UFL1-201ENST00000369278 RYR2Q92736 4967 aa3.73□□□□□ -1.81
UFL1-201ENST00000369278 FAT3Q8TDW7 4589 aa3.72□□□□□ -1.81
UFL1-201ENST00000369278 LPAP08519 4548 aa3.71□□□□□ -1.82
UFL1-201ENST00000369278 FAT1Q14517 4588 aa3.68□□□□□ -1.82
UFL1-201ENST00000369278 APOBP04114 4563 aaKnown RBP3.68□□□□□ -1.82
UFL1-201ENST00000369278 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
UFL1-201ENST00000369278 LRP1Q07954 4544 aaKnown RBP3.64□□□□□ -1.83
UFL1-201ENST00000369278 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
UFL1-201ENST00000369278 KRTAP21-3Q3LHN1 58 aa3.6□□□□□ -1.83
UFL1-201ENST00000369278 LORP23490 312 aaPredicted RBP3.58□□□□□ -1.84
UFL1-201ENST00000369278 EPPK1P58107 5090 aaKnown RBP3.58□□□□□ -1.84
UFL1-201ENST00000369278 LCE2CQ5TA81 110 aa3.58□□□□□ -1.84
UFL1-201ENST00000369278 TNXBP22105 4242 aa3.54□□□□□ -1.84
UFL1-201ENST00000369278 LOC100996750A0A140TA64 210 aa3.52□□□□□ -1.85
UFL1-201ENST00000369278 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
UFL1-201ENST00000369278 LRP2P98164 4655 aa3.48□□□□□ -1.85
UFL1-201ENST00000369278 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
UFL1-201ENST00000369278 PRO2289Q9P1D8 64 aa3.42□□□□□ -1.86
UFL1-201ENST00000369278 RYR1P21817 5038 aa3.41□□□□□ -1.86
UFL1-201ENST00000369278 ABCA13Q86UQ4 5058 aa3.41□□□□□ -1.86
UFL1-201ENST00000369278 HERC2O95714 4834 aa3.41□□□□□ -1.86
UFL1-201ENST00000369278 PCLOQ9Y6V0 5065 aa3.38□□□□□ -1.87
UFL1-201ENST00000369278 KRTAP10-4P60372 401 aaPredicted RBP3.37□□□□□ -1.87
UFL1-201ENST00000369278 BIRC6Q9NR09 4857 aa3.33□□□□□ -1.88
UFL1-201ENST00000369278 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
UFL1-201ENST00000369278 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
UFL1-201ENST00000369278 MT1HL1P0DM35 61 aa3.29□□□□□ -1.88
UFL1-201ENST00000369278 INE1O15225 51 aa3.29□□□□□ -1.88
UFL1-201ENST00000369278 MUC2Q02817 5179 aa3.27□□□□□ -1.89
UFL1-201ENST00000369278 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
UFL1-201ENST00000369278 LCE3BQ5TA77 95 aa3.26□□□□□ -1.89
UFL1-201ENST00000369278 KRTAP4-5Q9BYR2 181 aa3.25□□□□□ -1.89
UFL1-201ENST00000369278 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
UFL1-201ENST00000369278 KIAA1109Q2LD37 5005 aa3.24□□□□□ -1.89
UFL1-201ENST00000369278 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
UFL1-201ENST00000369278 MUC17Q685J3 4493 aa3.21□□□□□ -1.9
UFL1-201ENST00000369278 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
UFL1-201ENST00000369278 KRTAP4-1Q9BYQ7 146 aa3.2□□□□□ -1.9
UFL1-201ENST00000369278 KRTAP10-12P60413 245 aa3.17□□□□□ -1.9
UFL1-201ENST00000369278 KRTAP4-8Q9BYQ9 185 aa3.11□□□□□ -1.91
UFL1-201ENST00000369278 HMCN2Q8NDA2 5059 aa3.1□□□□□ -1.91
UFL1-201ENST00000369278 KRTAP9-6A0A140TA67 174 aa3.1□□□□□ -1.91
UFL1-201ENST00000369278 HERC1Q15751 4861 aa3.09□□□□□ -1.91
UFL1-201ENST00000369278 KRTAP9-2Q9BYQ4 174 aa3.07□□□□□ -1.92
UFL1-201ENST00000369278 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
UFL1-201ENST00000369278 FLGP20930 4061 aaPredicted RBP3.05□□□□□ -1.92
UFL1-201ENST00000369278 KRTAP10-5P60370 271 aa3.05□□□□□ -1.92
UFL1-201ENST00000369278 FAT4Q6V0I7 4981 aa3.04□□□□□ -1.92
UFL1-201ENST00000369278 KRTAP19-2Q3LHN2 52 aa3□□□□□ -1.93
UFL1-201ENST00000369278 KRTAP4-8A0A0G2JLE6 195 aa2.98□□□□□ -1.93
UFL1-201ENST00000369278 KRTAP23-1A1A580 65 aa2.98□□□□□ -1.93
UFL1-201ENST00000369278 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.94
UFL1-201ENST00000369278 UBR4Q5T4S7 5183 aa2.94□□□□□ -1.94
UFL1-201ENST00000369278 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
UFL1-201ENST00000369278 KRTAP9-8Q9BYQ0 159 aa2.9□□□□□ -1.95
UFL1-201ENST00000369278 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
UFL1-201ENST00000369278 KRTAP8-1Q8IUC2 63 aa2.89□□□□□ -1.95
UFL1-201ENST00000369278 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
UFL1-201ENST00000369278 MT1FP04733 61 aa2.88□□□□□ -1.95
UFL1-201ENST00000369278 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
UFL1-201ENST00000369278 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
UFL1-201ENST00000369278 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
UFL1-201ENST00000369278 KRTAP4-7Q9BYR0 210 aa2.88□□□□□ -1.95
UFL1-201ENST00000369278 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
UFL1-201ENST00000369278 KRTAP19-1Q8IUB9 90 aa2.87□□□□□ -1.95
UFL1-201ENST00000369278 RNF213Q63HN8 5207 aa2.87□□□□□ -1.95
UFL1-201ENST00000369278 MT2AP02795 61 aa2.85□□□□□ -1.95
UFL1-201ENST00000369278 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
UFL1-201ENST00000369278 SPRR2GQ9BYE4 73 aa2.84□□□□□ -1.95
UFL1-201ENST00000369278 FCGBPQ9Y6R7 5405 aaPredicted RBP2.84□□□□□ -1.95
UFL1-201ENST00000369278 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 573.3 ms