RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
UFL1-201ENST00000369278 PCGF6Q9BYE7 350 aa12.85□□□□□ -0.35
UFL1-201ENST00000369278 PPARGC1BQ86YN6 1023 aaKnown RBP12.71□□□□□ -0.37
UFL1-201ENST00000369278 EHMT2Q96KQ7 1210 aa12.71□□□□□ -0.37
UFL1-201ENST00000369278 NISCHQ9Y2I1 1504 aa12.7□□□□□ -0.38
UFL1-201ENST00000369278 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
UFL1-201ENST00000369278 SHROOM4Q9ULL8 1493 aa12.59□□□□□ -0.39
UFL1-201ENST00000369278 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
UFL1-201ENST00000369278 HRCP23327 699 aa12.46□□□□□ -0.42
UFL1-201ENST00000369278 TTBK1Q5TCY1 1321 aaPredicted RBP12.34□□□□□ -0.43
UFL1-201ENST00000369278 YTHDC1Q96MU7 727 aaKnown RBP12.32□□□□□ -0.44
UFL1-201ENST00000369278 FAM9AQ8IZU1 332 aaPredicted RBP12.2□□□□□ -0.46
UFL1-201ENST00000369278 MYT1Q01538 1121 aa12.12□□□□□ -0.47
UFL1-201ENST00000369278 CENPBP07199 599 aaPredicted RBP12.11□□□□□ -0.47
UFL1-201ENST00000369278 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
UFL1-201ENST00000369278 MYO15BQ96JP2 1530 aa12.03□□□□□ -0.48
UFL1-201ENST00000369278 LOC105371045A0A1W2PR82 267 aa12.03□□□□□ -0.48
UFL1-201ENST00000369278 GTF3C3Q9Y5Q9 886 aa12.01□□□□□ -0.49
UFL1-201ENST00000369278 CCER1Q8TC90 406 aaPredicted RBP12□□□□□ -0.49
UFL1-201ENST00000369278 ZEB1P37275 1124 aaPredicted RBP11.85□□□□□ -0.51
UFL1-201ENST00000369278 ERICH6Q7L0X2 663 aa11.84□□□□□ -0.51
UFL1-201ENST00000369278 TRIM26Q12899 539 aaPredicted RBP11.82□□□□□ -0.52
UFL1-201ENST00000369278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
UFL1-201ENST00000369278 NEUROD1Q13562 356 aa11.76□□□□□ -0.53
UFL1-201ENST00000369278 ACIN1Q9UKV3 1341 aaKnown RBP11.73□□□□□ -0.53
UFL1-201ENST00000369278 CHIC1Q5VXU3 224 aa11.73□□□□□ -0.53
UFL1-201ENST00000369278 DIEXFQ68CQ4 756 aaKnown RBP11.72□□□□□ -0.53
UFL1-201ENST00000369278 BCANQ96GW7 911 aa11.72□□□□□ -0.53
UFL1-201ENST00000369278 RANGAP1P46060 587 aaPredicted RBP11.69□□□□□ -0.54
UFL1-201ENST00000369278 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
UFL1-201ENST00000369278 DCAF1Q9Y4B6 1507 aa11.52□□□□□ -0.57
UFL1-201ENST00000369278 NEFLP07196 543 aa11.5□□□□□ -0.57
UFL1-201ENST00000369278 CCDC180Q9P1Z9 1646 aa11.47□□□□□ -0.57
UFL1-201ENST00000369278 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
UFL1-201ENST00000369278 BCL11AQ9H165 835 aa11.46□□□□□ -0.57
UFL1-201ENST00000369278 CNGB1Q14028 1251 aaPredicted RBP11.42□□□□□ -0.58
UFL1-201ENST00000369278 APLP2Q06481 763 aa11.4□□□□□ -0.59
UFL1-201ENST00000369278 UBTFP17480 764 aaKnown RBP11.31□□□□□ -0.6
UFL1-201ENST00000369278 ITGAEP38570 1179 aa11.31□□□□□ -0.6
UFL1-201ENST00000369278 EIF5BO60841 1220 aaKnown RBP11.3□□□□□ -0.6
UFL1-201ENST00000369278 MIER1Q8N108 512 aa11.25□□□□□ -0.61
UFL1-201ENST00000369278 ZNF316A6NFI3 1004 aaPredicted RBP11.24□□□□□ -0.61
UFL1-201ENST00000369278 NBR1Q14596 966 aa11.23□□□□□ -0.61
UFL1-201ENST00000369278 ANP32EQ9BTT0 268 aa11.23□□□□□ -0.61
UFL1-201ENST00000369278 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
UFL1-201ENST00000369278 FKBP8Q14318 412 aa11.21□□□□□ -0.61
UFL1-201ENST00000369278 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
UFL1-201ENST00000369278 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
UFL1-201ENST00000369278 PRKCSHP14314 528 aaPredicted RBP11.16□□□□□ -0.62
UFL1-201ENST00000369278 ATP1B4Q9UN42 357 aaPredicted RBP11.14□□□□□ -0.63
UFL1-201ENST00000369278 IRX6P78412 446 aaPredicted RBP11.13□□□□□ -0.63
UFL1-201ENST00000369278 POLR3GLQ9BT43 218 aa11.1□□□□□ -0.63
UFL1-201ENST00000369278 TRIM52Q96A61 297 aa11.07□□□□□ -0.64
UFL1-201ENST00000369278 CCDC136Q96JN2 1154 aa11.06□□□□□ -0.64
UFL1-201ENST00000369278 NPM2Q86SE8 214 aaKnown RBP11.05□□□□□ -0.64
UFL1-201ENST00000369278 CDK11AQ9UQ88 783 aaPredicted RBP11.05□□□□□ -0.64
UFL1-201ENST00000369278 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.04□□□□□ -0.64
UFL1-201ENST00000369278 SUPT16HQ9Y5B9 1047 aaKnown RBP11.01□□□□□ -0.65
UFL1-201ENST00000369278 SENP3-EIF4A1A0A087X0R7 540 aa10.99□□□□□ -0.65
UFL1-201ENST00000369278 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
UFL1-201ENST00000369278 HIRIP3Q9BW71 556 aaPredicted RBP10.97□□□□□ -0.65
UFL1-201ENST00000369278 TSHZ2Q9NRE2 1034 aa10.96□□□□□ -0.65
UFL1-201ENST00000369278 ARXQ96QS3 562 aa10.95□□□□□ -0.66
UFL1-201ENST00000369278 DDX10Q13206 875 aaKnown RBP10.92□□□□□ -0.66
UFL1-201ENST00000369278 DEKP35659 375 aaKnown RBP10.88□□□□□ -0.67
UFL1-201ENST00000369278 RBM19Q9Y4C8 960 aaKnown RBP10.88□□□□□ -0.67
UFL1-201ENST00000369278 ZCCHC6Q5VYS8 1495 aaKnown RBP10.86□□□□□ -0.67
UFL1-201ENST00000369278 ANO8Q9HCE9 1232 aaPredicted RBP10.86□□□□□ -0.67
UFL1-201ENST00000369278 HNRNPUQ00839 825 aaKnown RBP eCLIP10.84□□□□□ -0.67
UFL1-201ENST00000369278 ANP32CO43423 234 aa10.82□□□□□ -0.68
UFL1-201ENST00000369278 ANP32AP39687 249 aaKnown RBP10.81□□□□□ -0.68
UFL1-201ENST00000369278 CLSPNQ9HAW4 1339 aa10.79□□□□□ -0.68
UFL1-201ENST00000369278 LAS1LQ9Y4W2 734 aaKnown RBP10.78□□□□□ -0.68
UFL1-201ENST00000369278 KCNH8Q96L42 1107 aa10.77□□□□□ -0.69
UFL1-201ENST00000369278 SALL2Q9Y467 1007 aaPredicted RBP10.76□□□□□ -0.69
UFL1-201ENST00000369278 FAM9BQ8IZU0 186 aa10.75□□□□□ -0.69
UFL1-201ENST00000369278 ZBTB47Q9UFB7 747 aaPredicted RBP10.75□□□□□ -0.69
UFL1-201ENST00000369278 ARID4BQ4LE39 1312 aaPredicted RBP10.74□□□□□ -0.69
UFL1-201ENST00000369278 FAM50AQ14320 339 aaKnown RBP10.73□□□□□ -0.69
UFL1-201ENST00000369278 B4GALNT3Q6L9W6 998 aa10.7□□□□□ -0.7
UFL1-201ENST00000369278 MSH5O43196 834 aa10.69□□□□□ -0.7
UFL1-201ENST00000369278 ZNF326Q5BKZ1 582 aaKnown RBP10.65□□□□□ -0.7
UFL1-201ENST00000369278 TIMELESSQ9UNS1 1208 aa10.64□□□□□ -0.71
UFL1-201ENST00000369278 NEFMP07197 916 aa10.63□□□□□ -0.71
UFL1-201ENST00000369278 NOP58Q9Y2X3 529 aaKnown RBP10.62□□□□□ -0.71
UFL1-201ENST00000369278 GLIPR1L2Q4G1C9 344 aa10.59□□□□□ -0.71
UFL1-201ENST00000369278 IL27Q8NEV9 243 aa10.59□□□□□ -0.71
UFL1-201ENST00000369278 MYT1LQ9UL68 1186 aa10.57□□□□□ -0.72
UFL1-201ENST00000369278 AMER1Q5JTC6 1135 aaPredicted RBP10.57□□□□□ -0.72
UFL1-201ENST00000369278 ARID3AQ99856 593 aa10.55□□□□□ -0.72
UFL1-201ENST00000369278 NAP1L5Q96NT1 182 aaPredicted RBP10.53□□□□□ -0.72
UFL1-201ENST00000369278 RB1CC1Q8TDY2 1594 aa10.53□□□□□ -0.72
UFL1-201ENST00000369278 MRS2Q9HD23 443 aa10.5□□□□□ -0.73
UFL1-201ENST00000369278 P3H3Q8IVL6 736 aa10.49□□□□□ -0.73
UFL1-201ENST00000369278 VSIG10Q8N0Z9 540 aa10.49□□□□□ -0.73
UFL1-201ENST00000369278 SIN3AQ96ST3 1273 aa10.49□□□□□ -0.73
UFL1-201ENST00000369278 ARID3CA6NKF2 412 aa10.43□□□□□ -0.74
UFL1-201ENST00000369278 SLC4A3P48751 1232 aa10.43□□□□□ -0.74
UFL1-201ENST00000369278 BAZ1BQ9UIG0 1483 aaKnown RBP10.43□□□□□ -0.74
UFL1-201ENST00000369278 ZBTB7CA1YPR0 619 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms