RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ALMS1Q8TCU4 4167 aa4.24□□□□□ -1.73
PTPRK-206ENST00000368215 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
PTPRK-206ENST00000368215 FRAS1Q86XX4 4008 aa4.23□□□□□ -1.73
PTPRK-206ENST00000368215 DYNC2H1Q8NCM8 4307 aaKnown RBP4.2□□□□□ -1.74
PTPRK-206ENST00000368215 MT1HL1P0DM35 61 aa4.19□□□□□ -1.74
PTPRK-206ENST00000368215 DNAH6Q9C0G6 4158 aa4.18□□□□□ -1.74
PTPRK-206ENST00000368215 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
PTPRK-206ENST00000368215 HECTD4Q9Y4D8 3996 aa4.17□□□□□ -1.74
PTPRK-206ENST00000368215 KRTAP13-4Q3LI77 160 aa4.16□□□□□ -1.74
PTPRK-206ENST00000368215 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
PTPRK-206ENST00000368215 VPS13BQ7Z7G8 4022 aa4.15□□□□□ -1.74
PTPRK-206ENST00000368215 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.74
PTPRK-206ENST00000368215 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
PTPRK-206ENST00000368215 PLAC4Q8WY50 150 aa4.13□□□□□ -1.75
PTPRK-206ENST00000368215 KRTAP4-5Q9BYR2 181 aa4.13□□□□□ -1.75
PTPRK-206ENST00000368215 KRTAP3-3Q9BYR6 98 aa4.11□□□□□ -1.75
PTPRK-206ENST00000368215 HYDINQ4G0P3 5121 aa4.11□□□□□ -1.75
PTPRK-206ENST00000368215 SACSQ9NZJ4 4579 aa4.09□□□□□ -1.75
PTPRK-206ENST00000368215 MYCBP2O75592 4640 aa4.08□□□□□ -1.76
PTPRK-206ENST00000368215 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
PTPRK-206ENST00000368215 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
PTPRK-206ENST00000368215 FAT2Q9NYQ8 4349 aa4.07□□□□□ -1.76
PTPRK-206ENST00000368215 KRTAP3-2Q9BYR7 98 aa4.07□□□□□ -1.76
PTPRK-206ENST00000368215 RYR1P21817 5038 aa4.05□□□□□ -1.76
PTPRK-206ENST00000368215 KIAA1109Q2LD37 5005 aa4.03□□□□□ -1.76
PTPRK-206ENST00000368215 TNP1P09430 55 aa4.03□□□□□ -1.76
PTPRK-206ENST00000368215 LRP1Q07954 4544 aaKnown RBP4.02□□□□□ -1.77
PTPRK-206ENST00000368215 APOBP04114 4563 aaKnown RBP4.02□□□□□ -1.77
PTPRK-206ENST00000368215 PKHD1P08F94 4074 aa4.02□□□□□ -1.77
PTPRK-206ENST00000368215 KRTAP10-10P60014 251 aa3.98□□□□□ -1.77
PTPRK-206ENST00000368215 RYR3Q15413 4870 aa3.98□□□□□ -1.77
PTPRK-206ENST00000368215 FAT3Q8TDW7 4589 aa3.94□□□□□ -1.78
PTPRK-206ENST00000368215 RYR2Q92736 4967 aa3.93□□□□□ -1.78
PTPRK-206ENST00000368215 KRTAP17-1Q9BYP8 105 aa3.92□□□□□ -1.78
PTPRK-206ENST00000368215 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
PTPRK-206ENST00000368215 PKD1P98161 4303 aa3.9□□□□□ -1.79
PTPRK-206ENST00000368215 KMT2CQ8NEZ4 4911 aaKnown RBP3.89□□□□□ -1.79
PTPRK-206ENST00000368215 LORP23490 312 aaPredicted RBP3.88□□□□□ -1.79
PTPRK-206ENST00000368215 KRTAP4-1Q9BYQ7 146 aa3.85□□□□□ -1.79
PTPRK-206ENST00000368215 LRP2P98164 4655 aa3.81□□□□□ -1.8
PTPRK-206ENST00000368215 HSPG2P98160 4391 aa3.81□□□□□ -1.8
PTPRK-206ENST00000368215 HERC2O95714 4834 aa3.73□□□□□ -1.81
PTPRK-206ENST00000368215 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
PTPRK-206ENST00000368215 LPAP08519 4548 aa3.7□□□□□ -1.82
PTPRK-206ENST00000368215 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
PTPRK-206ENST00000368215 PKHD1L1Q86WI1 4243 aa3.69□□□□□ -1.82
PTPRK-206ENST00000368215 TNXBP22105 4242 aa3.67□□□□□ -1.82
PTPRK-206ENST00000368215 EPPK1P58107 5090 aaKnown RBP3.66□□□□□ -1.82
PTPRK-206ENST00000368215 ABCA13Q86UQ4 5058 aa3.58□□□□□ -1.84
PTPRK-206ENST00000368215 MT1HP80294 61 aa3.56□□□□□ -1.84
PTPRK-206ENST00000368215 BIRC6Q9NR09 4857 aa3.55□□□□□ -1.84
PTPRK-206ENST00000368215 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
PTPRK-206ENST00000368215 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
PTPRK-206ENST00000368215 MT2AP02795 61 aa3.52□□□□□ -1.85
PTPRK-206ENST00000368215 MT1FP04733 61 aa3.5□□□□□ -1.85
PTPRK-206ENST00000368215 HERC1Q15751 4861 aa3.49□□□□□ -1.85
PTPRK-206ENST00000368215 SPRR2GQ9BYE4 73 aa3.48□□□□□ -1.85
PTPRK-206ENST00000368215 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
PTPRK-206ENST00000368215 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
PTPRK-206ENST00000368215 PCLOQ9Y6V0 5065 aa3.44□□□□□ -1.86
PTPRK-206ENST00000368215 KRTAP19-1Q8IUB9 90 aa3.43□□□□□ -1.86
PTPRK-206ENST00000368215 MUC2Q02817 5179 aa3.41□□□□□ -1.86
PTPRK-206ENST00000368215 KRTAP19-2Q3LHN2 52 aa3.41□□□□□ -1.86
PTPRK-206ENST00000368215 LCE2CQ5TA81 110 aa3.4□□□□□ -1.87
PTPRK-206ENST00000368215 MUC17Q685J3 4493 aa3.39□□□□□ -1.87
PTPRK-206ENST00000368215 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
PTPRK-206ENST00000368215 RNF213Q63HN8 5207 aa3.33□□□□□ -1.88
PTPRK-206ENST00000368215 KRTAP9-8Q9BYQ0 159 aa3.32□□□□□ -1.88
PTPRK-206ENST00000368215 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
PTPRK-206ENST00000368215 KRTAP19-8Q3LI54 63 aa3.28□□□□□ -1.88
PTPRK-206ENST00000368215 UBR4Q5T4S7 5183 aa3.27□□□□□ -1.89
PTPRK-206ENST00000368215 MT1BP07438 61 aa3.27□□□□□ -1.89
PTPRK-206ENST00000368215 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
PTPRK-206ENST00000368215 HMCN2Q8NDA2 5059 aa3.26□□□□□ -1.89
PTPRK-206ENST00000368215 CRCT1Q9UGL9 99 aa3.26□□□□□ -1.89
PTPRK-206ENST00000368215 MT1XP80297 61 aa3.26□□□□□ -1.89
PTPRK-206ENST00000368215 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
PTPRK-206ENST00000368215 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
PTPRK-206ENST00000368215 KRTAP19-5Q3LI72 72 aa3.23□□□□□ -1.89
PTPRK-206ENST00000368215 KRTAP9-3Q9BYQ3 159 aa3.2□□□□□ -1.9
PTPRK-206ENST00000368215 INE1O15225 51 aa3.16□□□□□ -1.9
PTPRK-206ENST00000368215 KRTAP4-8A0A0G2JLE6 195 aa3.13□□□□□ -1.91
PTPRK-206ENST00000368215 KRTAP4-8Q9BYQ9 185 aa3.13□□□□□ -1.91
PTPRK-206ENST00000368215 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
PTPRK-206ENST00000368215 FSIP2Q5CZC0 6907 aa3.11□□□□□ -1.91
PTPRK-206ENST00000368215 LCE2BO14633 110 aa3.11□□□□□ -1.91
PTPRK-206ENST00000368215 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
PTPRK-206ENST00000368215 SPRR2FQ96RM1 72 aa3□□□□□ -1.93
PTPRK-206ENST00000368215 KRTAP4-7Q9BYR0 210 aa2.98□□□□□ -1.93
PTPRK-206ENST00000368215 LCE2AQ5TA79 106 aaPredicted RBP2.94□□□□□ -1.94
PTPRK-206ENST00000368215 USH2AO75445 5202 aa2.94□□□□□ -1.94
PTPRK-206ENST00000368215 MT1GP13640 62 aa2.9□□□□□ -1.95
PTPRK-206ENST00000368215 KMT2DO14686 5537 aa2.88□□□□□ -1.95
PTPRK-206ENST00000368215 MT1LQ93083 61 aa2.87□□□□□ -1.95
PTPRK-206ENST00000368215 MT1EP04732 61 aa2.86□□□□□ -1.95
PTPRK-206ENST00000368215 KRTAP19-4Q3LI73 84 aa2.85□□□□□ -1.95
PTPRK-206ENST00000368215 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
PTPRK-206ENST00000368215 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
PTPRK-206ENST00000368215 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
PTPRK-206ENST00000368215 LCE3BQ5TA77 95 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms