RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 DNAH6Q9C0G6 4158 aa6.03□□□□□ -1.44
PRKN-206ENST00000366898 DNAH5Q8TE73 4624 aa6.02□□□□□ -1.45
PRKN-206ENST00000366898 HYDINQ4G0P3 5121 aa6.02□□□□□ -1.45
PRKN-206ENST00000366898 A0A1B0GVY2 172 aa6.01□□□□□ -1.45
PRKN-206ENST00000366898 RPS29P62273 56 aaKnown RBP6□□□□□ -1.45
PRKN-206ENST00000366898 FAT1Q14517 4588 aa6□□□□□ -1.45
PRKN-206ENST00000366898 HECTD4Q9Y4D8 3996 aa5.98□□□□□ -1.45
PRKN-206ENST00000366898 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
PRKN-206ENST00000366898 TNP1P09430 55 aa5.94□□□□□ -1.46
PRKN-206ENST00000366898 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
PRKN-206ENST00000366898 KRTAP3-1Q9BYR8 98 aa5.91□□□□□ -1.46
PRKN-206ENST00000366898 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
PRKN-206ENST00000366898 SACSQ9NZJ4 4579 aa5.89□□□□□ -1.47
PRKN-206ENST00000366898 VPS13BQ7Z7G8 4022 aa5.88□□□□□ -1.47
PRKN-206ENST00000366898 DYNC1H1Q14204 4646 aaKnown RBP5.87□□□□□ -1.47
PRKN-206ENST00000366898 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
PRKN-206ENST00000366898 ALMS1Q8TCU4 4167 aa5.87□□□□□ -1.47
PRKN-206ENST00000366898 XP32Q5T750 250 aa5.85□□□□□ -1.47
PRKN-206ENST00000366898 FAT2Q9NYQ8 4349 aa5.84□□□□□ -1.47
PRKN-206ENST00000366898 PKHD1P08F94 4074 aa5.84□□□□□ -1.47
PRKN-206ENST00000366898 M0R2T5 61 aa5.81□□□□□ -1.48
PRKN-206ENST00000366898 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
PRKN-206ENST00000366898 PKD1P98161 4303 aa5.78□□□□□ -1.48
PRKN-206ENST00000366898 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
PRKN-206ENST00000366898 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
PRKN-206ENST00000366898 MYCBP2O75592 4640 aa5.77□□□□□ -1.49
PRKN-206ENST00000366898 RYR2Q92736 4967 aa5.74□□□□□ -1.49
PRKN-206ENST00000366898 LRP1Q07954 4544 aaKnown RBP5.71□□□□□ -1.5
PRKN-206ENST00000366898 RYR3Q15413 4870 aa5.69□□□□□ -1.5
PRKN-206ENST00000366898 BIRC6Q9NR09 4857 aa5.69□□□□□ -1.5
PRKN-206ENST00000366898 KIAA1109Q2LD37 5005 aa5.67□□□□□ -1.5
PRKN-206ENST00000366898 APOBP04114 4563 aaKnown RBP5.67□□□□□ -1.5
PRKN-206ENST00000366898 FAT3Q8TDW7 4589 aa5.62□□□□□ -1.51
PRKN-206ENST00000366898 PRO2289Q9P1D8 64 aa5.62□□□□□ -1.51
PRKN-206ENST00000366898 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
PRKN-206ENST00000366898 EPPK1P58107 5090 aaKnown RBP5.59□□□□□ -1.51
PRKN-206ENST00000366898 RYR1P21817 5038 aa5.59□□□□□ -1.51
PRKN-206ENST00000366898 MT1HL1P0DM35 61 aa5.58□□□□□ -1.52
PRKN-206ENST00000366898 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
PRKN-206ENST00000366898 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
PRKN-206ENST00000366898 HSPG2P98160 4391 aa5.49□□□□□ -1.53
PRKN-206ENST00000366898 INE1O15225 51 aa5.47□□□□□ -1.53
PRKN-206ENST00000366898 HERC2O95714 4834 aa5.44□□□□□ -1.54
PRKN-206ENST00000366898 LRP2P98164 4655 aa5.4□□□□□ -1.55
PRKN-206ENST00000366898 PKHD1L1Q86WI1 4243 aa5.34□□□□□ -1.55
PRKN-206ENST00000366898 TNXBP22105 4242 aa5.29□□□□□ -1.56
PRKN-206ENST00000366898 LPAP08519 4548 aa5.28□□□□□ -1.56
PRKN-206ENST00000366898 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
PRKN-206ENST00000366898 LORP23490 312 aaPredicted RBP5.23□□□□□ -1.57
PRKN-206ENST00000366898 PCLOQ9Y6V0 5065 aa5.23□□□□□ -1.57
PRKN-206ENST00000366898 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.57
PRKN-206ENST00000366898 KRTAP10-10P60014 251 aa5.13□□□□□ -1.59
PRKN-206ENST00000366898 HERC1Q15751 4861 aa5.09□□□□□ -1.6
PRKN-206ENST00000366898 MUC2Q02817 5179 aa5.02□□□□□ -1.61
PRKN-206ENST00000366898 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
PRKN-206ENST00000366898 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
PRKN-206ENST00000366898 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
PRKN-206ENST00000366898 UBR4Q5T4S7 5183 aa4.87□□□□□ -1.63
PRKN-206ENST00000366898 FAT4Q6V0I7 4981 aa4.83□□□□□ -1.64
PRKN-206ENST00000366898 RNF213Q63HN8 5207 aa4.83□□□□□ -1.64
PRKN-206ENST00000366898 HMCN2Q8NDA2 5059 aa4.81□□□□□ -1.64
PRKN-206ENST00000366898 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
PRKN-206ENST00000366898 MUC17Q685J3 4493 aa4.74□□□□□ -1.65
PRKN-206ENST00000366898 MT1HP80294 61 aa4.72□□□□□ -1.65
PRKN-206ENST00000366898 KRTAP19-2Q3LHN2 52 aa4.72□□□□□ -1.65
PRKN-206ENST00000366898 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
PRKN-206ENST00000366898 MT1FP04733 61 aa4.67□□□□□ -1.66
PRKN-206ENST00000366898 MT2AP02795 61 aa4.66□□□□□ -1.66
PRKN-206ENST00000366898 FLGP20930 4061 aaPredicted RBP4.65□□□□□ -1.67
PRKN-206ENST00000366898 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
PRKN-206ENST00000366898 LCE2CQ5TA81 110 aa4.63□□□□□ -1.67
PRKN-206ENST00000366898 KRTAP19-1Q8IUB9 90 aa4.61□□□□□ -1.67
PRKN-206ENST00000366898 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
PRKN-206ENST00000366898 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
PRKN-206ENST00000366898 KRTAP9-2Q9BYQ4 174 aa4.55□□□□□ -1.68
PRKN-206ENST00000366898 FSIP2Q5CZC0 6907 aa4.54□□□□□ -1.68
PRKN-206ENST00000366898 LCE2AQ5TA79 106 aaPredicted RBP4.49□□□□□ -1.69
PRKN-206ENST00000366898 KRTAP9-8Q9BYQ0 159 aa4.47□□□□□ -1.69
PRKN-206ENST00000366898 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
PRKN-206ENST00000366898 LCE2DQ5TA82 110 aaPredicted RBP4.44□□□□□ -1.7
PRKN-206ENST00000366898 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
PRKN-206ENST00000366898 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
PRKN-206ENST00000366898 MT1BP07438 61 aa4.38□□□□□ -1.71
PRKN-206ENST00000366898 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
PRKN-206ENST00000366898 MT1XP80297 61 aa4.36□□□□□ -1.71
PRKN-206ENST00000366898 KRTAP19-8Q3LI54 63 aa4.34□□□□□ -1.71
PRKN-206ENST00000366898 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
PRKN-206ENST00000366898 USH2AO75445 5202 aa4.3□□□□□ -1.72
PRKN-206ENST00000366898 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
PRKN-206ENST00000366898 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
PRKN-206ENST00000366898 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
PRKN-206ENST00000366898 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
PRKN-206ENST00000366898 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
PRKN-206ENST00000366898 LCE2BO14633 110 aa4.2□□□□□ -1.74
PRKN-206ENST00000366898 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
PRKN-206ENST00000366898 KMT2DO14686 5537 aa4.18□□□□□ -1.74
PRKN-206ENST00000366898 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
PRKN-206ENST00000366898 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
PRKN-206ENST00000366898 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
PRKN-206ENST00000366898 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms