RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 PLECQ15149 4684 aaKnown RBP9.24□□□□□ -0.93
SMURF1-201ENST00000361125 DNAH10Q8IVF4 4471 aa9.23□□□□□ -0.93
SMURF1-201ENST00000361125 CRCT1Q9UGL9 99 aa9.22□□□□□ -0.93
SMURF1-201ENST00000361125 LORP23490 312 aaPredicted RBP9.14□□□□□ -0.95
SMURF1-201ENST00000361125 DNAH5Q8TE73 4624 aa9.13□□□□□ -0.95
SMURF1-201ENST00000361125 DNAH17Q9UFH2 4485 aa9.12□□□□□ -0.95
SMURF1-201ENST00000361125 VPS13DQ5THJ4 4388 aa9.08□□□□□ -0.96
SMURF1-201ENST00000361125 DNAH11Q96DT5 4516 aa9.05□□□□□ -0.96
SMURF1-201ENST00000361125 DNAH3Q8TD57 4116 aa9.03□□□□□ -0.96
SMURF1-201ENST00000361125 LCE3AQ5TA76 89 aa9.02□□□□□ -0.96
SMURF1-201ENST00000361125 KRTAP12-3P60328 96 aa9.01□□□□□ -0.97
SMURF1-201ENST00000361125 DNAH2Q9P225 4427 aa8.95□□□□□ -0.98
SMURF1-201ENST00000361125 KRTAP23-1A1A580 65 aa8.92□□□□□ -0.98
SMURF1-201ENST00000361125 INE1O15225 51 aa8.92□□□□□ -0.98
SMURF1-201ENST00000361125 DNAH8Q96JB1 4490 aa8.89□□□□□ -0.99
SMURF1-201ENST00000361125 STARD9Q9P2P6 4700 aa8.85□□□□□ -0.99
SMURF1-201ENST00000361125 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
SMURF1-201ENST00000361125 ANK2Q01484 3957 aa8.74□□□□□ -1.01
SMURF1-201ENST00000361125 LRP1BQ9NZR2 4599 aa8.72□□□□□ -1.01
SMURF1-201ENST00000361125 DYNC1H1Q14204 4646 aaKnown RBP8.72□□□□□ -1.01
SMURF1-201ENST00000361125 SACSQ9NZJ4 4579 aa8.71□□□□□ -1.02
SMURF1-201ENST00000361125 DYNC2H1Q8NCM8 4307 aaKnown RBP8.7□□□□□ -1.02
SMURF1-201ENST00000361125 MT1HP80294 61 aa8.66□□□□□ -1.02
SMURF1-201ENST00000361125 KRTAP8-1Q8IUC2 63 aa8.64□□□□□ -1.03
SMURF1-201ENST00000361125 FAT1Q14517 4588 aa8.6□□□□□ -1.03
SMURF1-201ENST00000361125 FAT2Q9NYQ8 4349 aa8.59□□□□□ -1.03
SMURF1-201ENST00000361125 KMT2AQ03164 3969 aa8.59□□□□□ -1.03
SMURF1-201ENST00000361125 DNHD1Q96M86 4753 aa8.58□□□□□ -1.04
SMURF1-201ENST00000361125 CMYA5Q8N3K9 4069 aa8.56□□□□□ -1.04
SMURF1-201ENST00000361125 FRAS1Q86XX4 4008 aa8.54□□□□□ -1.04
SMURF1-201ENST00000361125 VPS13BQ7Z7G8 4022 aa8.51□□□□□ -1.05
SMURF1-201ENST00000361125 MT2AP02795 61 aa8.48□□□□□ -1.05
SMURF1-201ENST00000361125 PRKDCP78527 4128 aaKnown RBP8.48□□□□□ -1.05
SMURF1-201ENST00000361125 KRTAP10-5P60370 271 aa8.4□□□□□ -1.06
SMURF1-201ENST00000361125 DNAH6Q9C0G6 4158 aa8.36□□□□□ -1.07
SMURF1-201ENST00000361125 APOBP04114 4563 aaKnown RBP8.35□□□□□ -1.07
SMURF1-201ENST00000361125 HECTD4Q9Y4D8 3996 aa8.35□□□□□ -1.07
SMURF1-201ENST00000361125 MT1FP04733 61 aa8.34□□□□□ -1.07
SMURF1-201ENST00000361125 SPRR2GQ9BYE4 73 aa8.34□□□□□ -1.07
SMURF1-201ENST00000361125 LYSTQ99698 3801 aa8.31□□□□□ -1.08
SMURF1-201ENST00000361125 DNAH7Q8WXX0 4024 aa8.28□□□□□ -1.08
SMURF1-201ENST00000361125 RYR1P21817 5038 aa8.28□□□□□ -1.08
SMURF1-201ENST00000361125 KRTAP19-5Q3LI72 72 aa8.14□□□□□ -1.11
SMURF1-201ENST00000361125 KRTAP17-1Q9BYP8 105 aa8.11□□□□□ -1.11
SMURF1-201ENST00000361125 SPRR2FQ96RM1 72 aa8.07□□□□□ -1.12
SMURF1-201ENST00000361125 FAT3Q8TDW7 4589 aa8.06□□□□□ -1.12
SMURF1-201ENST00000361125 MYCBP2O75592 4640 aa8.04□□□□□ -1.12
SMURF1-201ENST00000361125 RYR3Q15413 4870 aa8.01□□□□□ -1.13
SMURF1-201ENST00000361125 LRP1Q07954 4544 aaKnown RBP7.93□□□□□ -1.14
SMURF1-201ENST00000361125 LCE3CQ5T5A8 94 aa7.92□□□□□ -1.14
SMURF1-201ENST00000361125 KRTAP10-7P60409 375 aaPredicted RBP7.91□□□□□ -1.14
SMURF1-201ENST00000361125 HYDINQ4G0P3 5121 aa7.8□□□□□ -1.16
SMURF1-201ENST00000361125 RYR2Q92736 4967 aa7.8□□□□□ -1.16
SMURF1-201ENST00000361125 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
SMURF1-201ENST00000361125 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
SMURF1-201ENST00000361125 KIAA1109Q2LD37 5005 aa7.72□□□□□ -1.17
SMURF1-201ENST00000361125 HSPG2P98160 4391 aa7.67□□□□□ -1.18
SMURF1-201ENST00000361125 MT1XP80297 61 aa7.64□□□□□ -1.19
SMURF1-201ENST00000361125 PKHD1P08F94 4074 aa7.63□□□□□ -1.19
SMURF1-201ENST00000361125 PKD1P98161 4303 aa7.62□□□□□ -1.19
SMURF1-201ENST00000361125 SPRR2EP22531 72 aa7.6□□□□□ -1.19
SMURF1-201ENST00000361125 SPRR2BP35325 72 aa7.6□□□□□ -1.19
SMURF1-201ENST00000361125 SPRR2AP35326 72 aa7.6□□□□□ -1.19
SMURF1-201ENST00000361125 PKHD1L1Q86WI1 4243 aa7.6□□□□□ -1.19
SMURF1-201ENST00000361125 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
SMURF1-201ENST00000361125 MT1BP07438 61 aa7.56□□□□□ -1.2
SMURF1-201ENST00000361125 SPRR5A0A1B0GTR4 108 aa7.54□□□□□ -1.2
SMURF1-201ENST00000361125 LRP2P98164 4655 aa7.52□□□□□ -1.2
SMURF1-201ENST00000361125 TNXBP22105 4242 aa7.48□□□□□ -1.21
SMURF1-201ENST00000361125 KRTAP19-4Q3LI73 84 aa7.46□□□□□ -1.22
SMURF1-201ENST00000361125 LPAP08519 4548 aa7.46□□□□□ -1.22
SMURF1-201ENST00000361125 LCE2CQ5TA81 110 aa7.45□□□□□ -1.22
SMURF1-201ENST00000361125 KRTAP4-8A0A0G2JLE6 195 aa7.43□□□□□ -1.22
SMURF1-201ENST00000361125 KRTAP4-8Q9BYQ9 185 aa7.43□□□□□ -1.22
SMURF1-201ENST00000361125 MT1GP13640 62 aa7.42□□□□□ -1.22
SMURF1-201ENST00000361125 HERC1Q15751 4861 aa7.42□□□□□ -1.22
SMURF1-201ENST00000361125 LCE3BQ5TA77 95 aa7.41□□□□□ -1.22
SMURF1-201ENST00000361125 KRTAP9-3Q9BYQ3 159 aa7.39□□□□□ -1.23
SMURF1-201ENST00000361125 SPRR2DP22532 72 aa7.34□□□□□ -1.23
SMURF1-201ENST00000361125 HERC2O95714 4834 aa7.33□□□□□ -1.24
SMURF1-201ENST00000361125 KMT2CQ8NEZ4 4911 aaKnown RBP7.32□□□□□ -1.24
SMURF1-201ENST00000361125 BIRC6Q9NR09 4857 aa7.29□□□□□ -1.24
SMURF1-201ENST00000361125 LCE2BO14633 110 aa7.27□□□□□ -1.25
SMURF1-201ENST00000361125 KRTAP19-2Q3LHN2 52 aa7.22□□□□□ -1.25
SMURF1-201ENST00000361125 KRTAP12-4P60329 112 aa7.08□□□□□ -1.28
SMURF1-201ENST00000361125 FLGP20930 4061 aaPredicted RBP7.07□□□□□ -1.28
SMURF1-201ENST00000361125 PCLOQ9Y6V0 5065 aa7.07□□□□□ -1.28
SMURF1-201ENST00000361125 MUC17Q685J3 4493 aa7.04□□□□□ -1.28
SMURF1-201ENST00000361125 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
SMURF1-201ENST00000361125 KRTAP19-3Q7Z4W3 81 aa6.94□□□□□ -1.3
SMURF1-201ENST00000361125 MT1LQ93083 61 aa6.9□□□□□ -1.31
SMURF1-201ENST00000361125 LCE3DQ9BYE3 92 aa6.86□□□□□ -1.31
SMURF1-201ENST00000361125 MT1EP04732 61 aa6.85□□□□□ -1.31
SMURF1-201ENST00000361125 LCE3EQ5T5B0 92 aa6.72□□□□□ -1.33
SMURF1-201ENST00000361125 EPPK1P58107 5090 aaKnown RBP6.7□□□□□ -1.34
SMURF1-201ENST00000361125 ABCA13Q86UQ4 5058 aa6.69□□□□□ -1.34
SMURF1-201ENST00000361125 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
SMURF1-201ENST00000361125 MT1MQ8N339 61 aa6.65□□□□□ -1.35
SMURF1-201ENST00000361125 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
SMURF1-201ENST00000361125 KRTAP19-6Q3LI70 58 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms