RNA–Protein interactions for RNA: ENST00000357248.8

SMARCA2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-204ENST00000357248 MEGF8Q7Z7M0 2845 aa6.61□□□□□ -1.35
SMARCA2-204ENST00000357248 DNAH2Q9P225 4427 aa6.59□□□□□ -1.35
SMARCA2-204ENST00000357248 DNAH8Q96JB1 4490 aa6.57□□□□□ -1.36
SMARCA2-204ENST00000357248 CSMD3Q7Z407 3707 aa6.56□□□□□ -1.36
SMARCA2-204ENST00000357248 HECTD4Q9Y4D8 3996 aa6.55□□□□□ -1.36
SMARCA2-204ENST00000357248 PRKDCP78527 4128 aaKnown RBP6.55□□□□□ -1.36
SMARCA2-204ENST00000357248 LYSTQ99698 3801 aa6.55□□□□□ -1.36
SMARCA2-204ENST00000357248 FBN3Q75N90 2809 aa6.48□□□□□ -1.37
SMARCA2-204ENST00000357248 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
SMARCA2-204ENST00000357248 DNAH11Q96DT5 4516 aa6.45□□□□□ -1.38
SMARCA2-204ENST00000357248 KMT2AQ03164 3969 aa6.43□□□□□ -1.38
SMARCA2-204ENST00000357248 DNAH5Q8TE73 4624 aa6.43□□□□□ -1.38
SMARCA2-204ENST00000357248 INE1O15225 51 aa6.43□□□□□ -1.38
SMARCA2-204ENST00000357248 KRTAP10-4P60372 401 aaPredicted RBP6.38□□□□□ -1.39
SMARCA2-204ENST00000357248 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
SMARCA2-204ENST00000357248 LRP1BQ9NZR2 4599 aa6.33□□□□□ -1.4
SMARCA2-204ENST00000357248 FRAS1Q86XX4 4008 aa6.32□□□□□ -1.4
SMARCA2-204ENST00000357248 KRTAP10-12P60413 245 aa6.31□□□□□ -1.4
SMARCA2-204ENST00000357248 SACSQ9NZJ4 4579 aa6.29□□□□□ -1.4
SMARCA2-204ENST00000357248 DNHD1Q96M86 4753 aa6.28□□□□□ -1.4
SMARCA2-204ENST00000357248 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
SMARCA2-204ENST00000357248 FAT2Q9NYQ8 4349 aa6.25□□□□□ -1.41
SMARCA2-204ENST00000357248 PKD1P98161 4303 aa6.24□□□□□ -1.41
SMARCA2-204ENST00000357248 DYNC1H1Q14204 4646 aaKnown RBP6.22□□□□□ -1.41
SMARCA2-204ENST00000357248 VPS13BQ7Z7G8 4022 aa6.21□□□□□ -1.42
SMARCA2-204ENST00000357248 HYDINQ4G0P3 5121 aa6.13□□□□□ -1.43
SMARCA2-204ENST00000357248 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
SMARCA2-204ENST00000357248 APOBP04114 4563 aaKnown RBP6.07□□□□□ -1.44
SMARCA2-204ENST00000357248 PKHD1L1Q86WI1 4243 aa6.05□□□□□ -1.44
SMARCA2-204ENST00000357248 MT1HL1P0DM35 61 aa6□□□□□ -1.45
SMARCA2-204ENST00000357248 FAT1Q14517 4588 aa6□□□□□ -1.45
SMARCA2-204ENST00000357248 KRTAP3-3Q9BYR6 98 aa6□□□□□ -1.45
SMARCA2-204ENST00000357248 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
SMARCA2-204ENST00000357248 RYR2Q92736 4967 aa5.97□□□□□ -1.45
SMARCA2-204ENST00000357248 LCE3AQ5TA76 89 aa5.96□□□□□ -1.46
SMARCA2-204ENST00000357248 KRTAP3-2Q9BYR7 98 aa5.96□□□□□ -1.46
SMARCA2-204ENST00000357248 PKHD1P08F94 4074 aa5.94□□□□□ -1.46
SMARCA2-204ENST00000357248 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
SMARCA2-204ENST00000357248 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
SMARCA2-204ENST00000357248 FAT3Q8TDW7 4589 aa5.89□□□□□ -1.47
SMARCA2-204ENST00000357248 RYR1P21817 5038 aa5.81□□□□□ -1.48
SMARCA2-204ENST00000357248 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
SMARCA2-204ENST00000357248 TNXBP22105 4242 aa5.78□□□□□ -1.48
SMARCA2-204ENST00000357248 HSPG2P98160 4391 aa5.74□□□□□ -1.49
SMARCA2-204ENST00000357248 KRTAP4-5Q9BYR2 181 aa5.73□□□□□ -1.49
SMARCA2-204ENST00000357248 LRP1Q07954 4544 aaKnown RBP5.7□□□□□ -1.5
SMARCA2-204ENST00000357248 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
SMARCA2-204ENST00000357248 KMT2CQ8NEZ4 4911 aaKnown RBP5.63□□□□□ -1.51
SMARCA2-204ENST00000357248 RYR3Q15413 4870 aa5.62□□□□□ -1.51
SMARCA2-204ENST00000357248 MYCBP2O75592 4640 aa5.61□□□□□ -1.51
SMARCA2-204ENST00000357248 KIAA1109Q2LD37 5005 aa5.59□□□□□ -1.51
SMARCA2-204ENST00000357248 KRTAP10-7P60409 375 aaPredicted RBP5.52□□□□□ -1.53
SMARCA2-204ENST00000357248 KRTAP4-1Q9BYQ7 146 aa5.45□□□□□ -1.54
SMARCA2-204ENST00000357248 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
SMARCA2-204ENST00000357248 LRP2P98164 4655 aa5.39□□□□□ -1.55
SMARCA2-204ENST00000357248 MT1HP80294 61 aa5.34□□□□□ -1.56
SMARCA2-204ENST00000357248 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
SMARCA2-204ENST00000357248 EPPK1P58107 5090 aaKnown RBP5.3□□□□□ -1.56
SMARCA2-204ENST00000357248 KRTAP19-2Q3LHN2 52 aa5.3□□□□□ -1.56
SMARCA2-204ENST00000357248 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
SMARCA2-204ENST00000357248 MT2AP02795 61 aa5.28□□□□□ -1.56
SMARCA2-204ENST00000357248 LPAP08519 4548 aa5.24□□□□□ -1.57
SMARCA2-204ENST00000357248 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
SMARCA2-204ENST00000357248 SPRR2GQ9BYE4 73 aa5.23□□□□□ -1.57
SMARCA2-204ENST00000357248 HERC2O95714 4834 aa5.22□□□□□ -1.57
SMARCA2-204ENST00000357248 BIRC6Q9NR09 4857 aa5.19□□□□□ -1.58
SMARCA2-204ENST00000357248 ABCA13Q86UQ4 5058 aa5.18□□□□□ -1.58
SMARCA2-204ENST00000357248 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
SMARCA2-204ENST00000357248 SPRR2EP22531 72 aa5.13□□□□□ -1.59
SMARCA2-204ENST00000357248 SPRR2BP35325 72 aa5.13□□□□□ -1.59
SMARCA2-204ENST00000357248 SPRR2AP35326 72 aa5.13□□□□□ -1.59
SMARCA2-204ENST00000357248 MT1FP04733 61 aa5.12□□□□□ -1.59
SMARCA2-204ENST00000357248 FLGP20930 4061 aaPredicted RBP5.11□□□□□ -1.59
SMARCA2-204ENST00000357248 HERC1Q15751 4861 aa5.09□□□□□ -1.59
SMARCA2-204ENST00000357248 LCE2CQ5TA81 110 aa5.05□□□□□ -1.6
SMARCA2-204ENST00000357248 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
SMARCA2-204ENST00000357248 SPRR2DP22532 72 aa4.98□□□□□ -1.61
SMARCA2-204ENST00000357248 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
SMARCA2-204ENST00000357248 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
SMARCA2-204ENST00000357248 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
SMARCA2-204ENST00000357248 LCE2BO14633 110 aa4.91□□□□□ -1.62
SMARCA2-204ENST00000357248 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.63
SMARCA2-204ENST00000357248 MT1GP13640 62 aa4.87□□□□□ -1.63
SMARCA2-204ENST00000357248 PCLOQ9Y6V0 5065 aa4.86□□□□□ -1.63
SMARCA2-204ENST00000357248 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
SMARCA2-204ENST00000357248 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
SMARCA2-204ENST00000357248 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
SMARCA2-204ENST00000357248 MT1BP07438 61 aa4.74□□□□□ -1.65
SMARCA2-204ENST00000357248 RNF213Q63HN8 5207 aa4.71□□□□□ -1.65
SMARCA2-204ENST00000357248 MT1XP80297 61 aa4.71□□□□□ -1.66
SMARCA2-204ENST00000357248 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
SMARCA2-204ENST00000357248 KRTAP9-3Q9BYQ3 159 aa4.68□□□□□ -1.66
SMARCA2-204ENST00000357248 MUC2Q02817 5179 aa4.68□□□□□ -1.66
SMARCA2-204ENST00000357248 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
SMARCA2-204ENST00000357248 LCE2DQ5TA82 110 aaPredicted RBP4.59□□□□□ -1.67
SMARCA2-204ENST00000357248 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
SMARCA2-204ENST00000357248 KRTAP4-8Q9BYQ9 185 aa4.57□□□□□ -1.68
SMARCA2-204ENST00000357248 UBR4Q5T4S7 5183 aa4.52□□□□□ -1.69
SMARCA2-204ENST00000357248 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
SMARCA2-204ENST00000357248 MT3P25713 68 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 2481.8 ms