RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 PP632Q6XCG6 107 aa6.67□□□□□ -1.34
ATN1-201ENST00000356654 PRKDCP78527 4128 aaKnown RBP6.67□□□□□ -1.34
ATN1-201ENST00000356654 VPS13DQ5THJ4 4388 aa6.66□□□□□ -1.34
ATN1-201ENST00000356654 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
ATN1-201ENST00000356654 DYNC1H1Q14204 4646 aaKnown RBP6.61□□□□□ -1.35
ATN1-201ENST00000356654 ALMS1Q8TCU4 4167 aa6.58□□□□□ -1.36
ATN1-201ENST00000356654 DNAH17Q9UFH2 4485 aa6.56□□□□□ -1.36
ATN1-201ENST00000356654 LRP1BQ9NZR2 4599 aa6.55□□□□□ -1.36
ATN1-201ENST00000356654 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
ATN1-201ENST00000356654 RYR1P21817 5038 aa6.51□□□□□ -1.37
ATN1-201ENST00000356654 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
ATN1-201ENST00000356654 DNAH2Q9P225 4427 aa6.48□□□□□ -1.37
ATN1-201ENST00000356654 KMT2AQ03164 3969 aa6.48□□□□□ -1.37
ATN1-201ENST00000356654 DNAH8Q96JB1 4490 aa6.47□□□□□ -1.37
ATN1-201ENST00000356654 KIAA1109Q2LD37 5005 aa6.46□□□□□ -1.37
ATN1-201ENST00000356654 ANK2Q01484 3957 aa6.46□□□□□ -1.38
ATN1-201ENST00000356654 LYSTQ99698 3801 aa6.43□□□□□ -1.38
ATN1-201ENST00000356654 SACSQ9NZJ4 4579 aa6.35□□□□□ -1.39
ATN1-201ENST00000356654 MYCBP2O75592 4640 aa6.34□□□□□ -1.39
ATN1-201ENST00000356654 RYR3Q15413 4870 aa6.31□□□□□ -1.4
ATN1-201ENST00000356654 DYNC2H1Q8NCM8 4307 aaKnown RBP6.29□□□□□ -1.4
ATN1-201ENST00000356654 DNAH3Q8TD57 4116 aa6.29□□□□□ -1.4
ATN1-201ENST00000356654 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
ATN1-201ENST00000356654 FAT2Q9NYQ8 4349 aa6.28□□□□□ -1.4
ATN1-201ENST00000356654 KRTAP4-1Q9BYQ7 146 aa6.27□□□□□ -1.41
ATN1-201ENST00000356654 VPS13BQ7Z7G8 4022 aa6.24□□□□□ -1.41
ATN1-201ENST00000356654 CMYA5Q8N3K9 4069 aa6.23□□□□□ -1.41
ATN1-201ENST00000356654 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
ATN1-201ENST00000356654 LRP1Q07954 4544 aaKnown RBP6.2□□□□□ -1.42
ATN1-201ENST00000356654 APOBP04114 4563 aaKnown RBP6.2□□□□□ -1.42
ATN1-201ENST00000356654 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
ATN1-201ENST00000356654 DNAH6Q9C0G6 4158 aa6.15□□□□□ -1.43
ATN1-201ENST00000356654 DNAH7Q8WXX0 4024 aa6.13□□□□□ -1.43
ATN1-201ENST00000356654 HYDINQ4G0P3 5121 aa6.11□□□□□ -1.43
ATN1-201ENST00000356654 FRAS1Q86XX4 4008 aa6.08□□□□□ -1.44
ATN1-201ENST00000356654 RYR2Q92736 4967 aa6.07□□□□□ -1.44
ATN1-201ENST00000356654 HECTD4Q9Y4D8 3996 aa6.03□□□□□ -1.44
ATN1-201ENST00000356654 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
ATN1-201ENST00000356654 HERC2O95714 4834 aa6□□□□□ -1.45
ATN1-201ENST00000356654 PKHD1P08F94 4074 aa5.97□□□□□ -1.45
ATN1-201ENST00000356654 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
ATN1-201ENST00000356654 MT1HP80294 61 aa5.94□□□□□ -1.46
ATN1-201ENST00000356654 LRP2P98164 4655 aa5.94□□□□□ -1.46
ATN1-201ENST00000356654 KMT2CQ8NEZ4 4911 aaKnown RBP5.93□□□□□ -1.46
ATN1-201ENST00000356654 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
ATN1-201ENST00000356654 MT2AP02795 61 aa5.86□□□□□ -1.47
ATN1-201ENST00000356654 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
ATN1-201ENST00000356654 HSPG2P98160 4391 aa5.8□□□□□ -1.48
ATN1-201ENST00000356654 MT1FP04733 61 aa5.78□□□□□ -1.48
ATN1-201ENST00000356654 BIRC6Q9NR09 4857 aa5.75□□□□□ -1.49
ATN1-201ENST00000356654 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
ATN1-201ENST00000356654 PKD1P98161 4303 aa5.72□□□□□ -1.49
ATN1-201ENST00000356654 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.49
ATN1-201ENST00000356654 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
ATN1-201ENST00000356654 EPPK1P58107 5090 aaKnown RBP5.64□□□□□ -1.51
ATN1-201ENST00000356654 PCLOQ9Y6V0 5065 aa5.64□□□□□ -1.51
ATN1-201ENST00000356654 LPAP08519 4548 aa5.62□□□□□ -1.51
ATN1-201ENST00000356654 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
ATN1-201ENST00000356654 HERC1Q15751 4861 aa5.57□□□□□ -1.52
ATN1-201ENST00000356654 ABCA13Q86UQ4 5058 aa5.56□□□□□ -1.52
ATN1-201ENST00000356654 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
ATN1-201ENST00000356654 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
ATN1-201ENST00000356654 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
ATN1-201ENST00000356654 KRTAP19-8Q3LI54 63 aa5.41□□□□□ -1.54
ATN1-201ENST00000356654 TNXBP22105 4242 aa5.39□□□□□ -1.55
ATN1-201ENST00000356654 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
ATN1-201ENST00000356654 KRTAP19-2Q3LHN2 52 aa5.36□□□□□ -1.55
ATN1-201ENST00000356654 PKHD1L1Q86WI1 4243 aa5.36□□□□□ -1.55
ATN1-201ENST00000356654 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
ATN1-201ENST00000356654 MT1BP07438 61 aa5.34□□□□□ -1.55
ATN1-201ENST00000356654 MT1XP80297 61 aa5.31□□□□□ -1.56
ATN1-201ENST00000356654 MUC17Q685J3 4493 aa5.29□□□□□ -1.56
ATN1-201ENST00000356654 INE1O15225 51 aa5.28□□□□□ -1.56
ATN1-201ENST00000356654 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
ATN1-201ENST00000356654 KRTAP10-5P60370 271 aa5.26□□□□□ -1.57
ATN1-201ENST00000356654 UBR4Q5T4S7 5183 aa5.23□□□□□ -1.57
ATN1-201ENST00000356654 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
ATN1-201ENST00000356654 RNF213Q63HN8 5207 aa5.22□□□□□ -1.57
ATN1-201ENST00000356654 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
ATN1-201ENST00000356654 FAT4Q6V0I7 4981 aa5.17□□□□□ -1.58
ATN1-201ENST00000356654 MUC2Q02817 5179 aa5.17□□□□□ -1.58
ATN1-201ENST00000356654 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
ATN1-201ENST00000356654 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
ATN1-201ENST00000356654 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
ATN1-201ENST00000356654 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
ATN1-201ENST00000356654 LCE2BO14633 110 aa5.11□□□□□ -1.59
ATN1-201ENST00000356654 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
ATN1-201ENST00000356654 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.63
ATN1-201ENST00000356654 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
ATN1-201ENST00000356654 LCE2AQ5TA79 106 aaPredicted RBP4.86□□□□□ -1.63
ATN1-201ENST00000356654 MT1GP13640 62 aa4.85□□□□□ -1.63
ATN1-201ENST00000356654 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
ATN1-201ENST00000356654 SPRR2EP22531 72 aa4.83□□□□□ -1.64
ATN1-201ENST00000356654 SPRR2BP35325 72 aa4.83□□□□□ -1.64
ATN1-201ENST00000356654 SPRR2AP35326 72 aa4.83□□□□□ -1.64
ATN1-201ENST00000356654 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
ATN1-201ENST00000356654 MT1LQ93083 61 aa4.72□□□□□ -1.65
ATN1-201ENST00000356654 MT1EP04732 61 aa4.72□□□□□ -1.65
ATN1-201ENST00000356654 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
ATN1-201ENST00000356654 KRTAP19-6Q3LI70 58 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 1203.4 ms