RNA–Protein interactions for RNA: ENST00000356247.4

AC004057.1-202, humanhuman

TSL 3 BASIC

Gene AC004057.1, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004057.1-202ENST00000356247 NOTCH3Q9UM47 2321 aa2.19□□□□□ -2.06
AC004057.1-202ENST00000356247 KRTAP1-4P0C5Y4 121 aa2.18□□□□□ -2.06
AC004057.1-202ENST00000356247 KRTAP10-3P60369 221 aa2.18□□□□□ -2.06
AC004057.1-202ENST00000356247 PRKDCP78527 4128 aaKnown RBP2.17□□□□□ -2.06
AC004057.1-202ENST00000356247 A0A096LNI7 61 aa2.17□□□□□ -2.06
AC004057.1-202ENST00000356247 DNAH3Q8TD57 4116 aa2.16□□□□□ -2.06
AC004057.1-202ENST00000356247 KRTAP10-8P60410 259 aa2.16□□□□□ -2.06
AC004057.1-202ENST00000356247 SPINK6Q6UWN8 80 aa2.16□□□□□ -2.06
AC004057.1-202ENST00000356247 NOTCH1P46531 2555 aa2.16□□□□□ -2.06
AC004057.1-202ENST00000356247 PKD1L1Q8TDX9 2849 aa2.16□□□□□ -2.06
AC004057.1-202ENST00000356247 VWFP04275 2813 aa2.15□□□□□ -2.06
AC004057.1-202ENST00000356247 KRTAP12-1P59990 96 aa2.15□□□□□ -2.07
AC004057.1-202ENST00000356247 KRTAP10-6P60371 365 aaPredicted RBP2.15□□□□□ -2.07
AC004057.1-202ENST00000356247 KRTAP10-12P60413 245 aa2.15□□□□□ -2.07
AC004057.1-202ENST00000356247 A0A0D9SG42 100 aa2.14□□□□□ -2.07
AC004057.1-202ENST00000356247 TENM2Q9NT68 2774 aa2.11□□□□□ -2.07
AC004057.1-202ENST00000356247 A0A1B0GVY2 172 aa2.11□□□□□ -2.07
AC004057.1-202ENST00000356247 TGP01266 2768 aa2.11□□□□□ -2.07
AC004057.1-202ENST00000356247 KRTAP10-7P60409 375 aaPredicted RBP2.1□□□□□ -2.07
AC004057.1-202ENST00000356247 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
AC004057.1-202ENST00000356247 DNAH9Q9NYC9 4486 aa2.09□□□□□ -2.07
AC004057.1-202ENST00000356247 KRTAP13-2Q52LG2 175 aa2.09□□□□□ -2.07
AC004057.1-202ENST00000356247 HTN3P15516 51 aa2.08□□□□□ -2.08
AC004057.1-202ENST00000356247 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
AC004057.1-202ENST00000356247 TENM3Q9P273 2699 aa2.07□□□□□ -2.08
AC004057.1-202ENST00000356247 STAB2Q8WWQ8 2551 aa2.06□□□□□ -2.08
AC004057.1-202ENST00000356247 DNAH7Q8WXX0 4024 aa2.06□□□□□ -2.08
AC004057.1-202ENST00000356247 DYNC2H1Q8NCM8 4307 aaKnown RBP2.06□□□□□ -2.08
AC004057.1-202ENST00000356247 HUWE1Q7Z6Z7 4374 aaKnown RBP2.06□□□□□ -2.08
AC004057.1-202ENST00000356247 RPS29P62273 56 aaKnown RBP2.06□□□□□ -2.08
AC004057.1-202ENST00000356247 LCE3CQ5T5A8 94 aa2.06□□□□□ -2.08
AC004057.1-202ENST00000356247 KMT2CQ8NEZ4 4911 aaKnown RBP2.06□□□□□ -2.08
AC004057.1-202ENST00000356247 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
AC004057.1-202ENST00000356247 NBEAL2Q6ZNJ1 2754 aa2.05□□□□□ -2.08
AC004057.1-202ENST00000356247 DNAH1Q9P2D7 4330 aa2.04□□□□□ -2.08
AC004057.1-202ENST00000356247 SACSQ9NZJ4 4579 aa2.03□□□□□ -2.08
AC004057.1-202ENST00000356247 DEFB135Q30KP9 77 aa2.03□□□□□ -2.08
AC004057.1-202ENST00000356247 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
AC004057.1-202ENST00000356247 COL7A1Q02388 2944 aa2.03□□□□□ -2.08
AC004057.1-202ENST00000356247 RYR2Q92736 4967 aa2.02□□□□□ -2.09
AC004057.1-202ENST00000356247 RYR3Q15413 4870 aa2.02□□□□□ -2.09
AC004057.1-202ENST00000356247 KRTAP10-5P60370 271 aa2.02□□□□□ -2.09
AC004057.1-202ENST00000356247 STARD9Q9P2P6 4700 aa2□□□□□ -2.09
AC004057.1-202ENST00000356247 PLECQ15149 4684 aaKnown RBP2□□□□□ -2.09
AC004057.1-202ENST00000356247 BIRC6Q9NR09 4857 aa1.99□□□□□ -2.09
AC004057.1-202ENST00000356247 LYSTQ99698 3801 aa1.99□□□□□ -2.09
AC004057.1-202ENST00000356247 DNAH6Q9C0G6 4158 aa1.99□□□□□ -2.09
AC004057.1-202ENST00000356247 DEFB4AO15263 64 aa1.98□□□□□ -2.09
AC004057.1-202ENST00000356247 VPS13DQ5THJ4 4388 aa1.96□□□□□ -2.1
AC004057.1-202ENST00000356247 CSMD3Q7Z407 3707 aa1.96□□□□□ -2.1
AC004057.1-202ENST00000356247 DNAH10Q8IVF4 4471 aa1.95□□□□□ -2.1
AC004057.1-202ENST00000356247 HECTD4Q9Y4D8 3996 aa1.95□□□□□ -2.1
AC004057.1-202ENST00000356247 TNP1P09430 55 aa1.94□□□□□ -2.1
AC004057.1-202ENST00000356247 EPPK1P58107 5090 aaKnown RBP1.94□□□□□ -2.1
AC004057.1-202ENST00000356247 KMT2AQ03164 3969 aa1.93□□□□□ -2.1
AC004057.1-202ENST00000356247 HYDINQ4G0P3 5121 aa1.93□□□□□ -2.1
AC004057.1-202ENST00000356247 HERC2O95714 4834 aa1.93□□□□□ -2.1
AC004057.1-202ENST00000356247 DNAH11Q96DT5 4516 aa1.91□□□□□ -2.1
AC004057.1-202ENST00000356247 DYNC1H1Q14204 4646 aaKnown RBP1.91□□□□□ -2.1
AC004057.1-202ENST00000356247 FAT2Q9NYQ8 4349 aa1.91□□□□□ -2.1
AC004057.1-202ENST00000356247 FRAS1Q86XX4 4008 aa1.91□□□□□ -2.1
AC004057.1-202ENST00000356247 C9orf92A6NGG3 77 aa1.91□□□□□ -2.1
AC004057.1-202ENST00000356247 DNAH17Q9UFH2 4485 aa1.91□□□□□ -2.1
AC004057.1-202ENST00000356247 PKHD1P08F94 4074 aa1.91□□□□□ -2.1
AC004057.1-202ENST00000356247 DNAH2Q9P225 4427 aa1.9□□□□□ -2.11
AC004057.1-202ENST00000356247 KRTAP10-10P60014 251 aa1.89□□□□□ -2.11
AC004057.1-202ENST00000356247 DMBT1Q9UGM3 2413 aaPredicted RBP1.87□□□□□ -2.11
AC004057.1-202ENST00000356247 HSPG2P98160 4391 aa1.87□□□□□ -2.11
AC004057.1-202ENST00000356247 LCE3EQ5T5B0 92 aa1.87□□□□□ -2.11
AC004057.1-202ENST00000356247 LRP1BQ9NZR2 4599 aa1.87□□□□□ -2.11
AC004057.1-202ENST00000356247 RYR1P21817 5038 aa1.87□□□□□ -2.11
AC004057.1-202ENST00000356247 PCLOQ9Y6V0 5065 aa1.86□□□□□ -2.11
AC004057.1-202ENST00000356247 SRRM2Q9UQ35 2752 aaKnown RBP1.86□□□□□ -2.11
AC004057.1-202ENST00000356247 KIAA1109Q2LD37 5005 aa1.86□□□□□ -2.11
AC004057.1-202ENST00000356247 APOBP04114 4563 aaKnown RBP1.85□□□□□ -2.11
AC004057.1-202ENST00000356247 PKD1P98161 4303 aa1.85□□□□□ -2.11
AC004057.1-202ENST00000356247 DNAH5Q8TE73 4624 aa1.84□□□□□ -2.11
AC004057.1-202ENST00000356247 ABCA13Q86UQ4 5058 aa1.83□□□□□ -2.12
AC004057.1-202ENST00000356247 VPS13BQ7Z7G8 4022 aa1.82□□□□□ -2.12
AC004057.1-202ENST00000356247 KRTAP9-6A8MVA2 160 aa1.82□□□□□ -2.12
AC004057.1-202ENST00000356247 KRTAP10-1P60331 282 aa1.81□□□□□ -2.12
AC004057.1-202ENST00000356247 KRTAP5-1Q6L8H4 278 aa1.81□□□□□ -2.12
AC004057.1-202ENST00000356247 FAT1Q14517 4588 aa1.8□□□□□ -2.12
AC004057.1-202ENST00000356247 DNAH8Q96JB1 4490 aa1.79□□□□□ -2.12
AC004057.1-202ENST00000356247 MYCBP2O75592 4640 aa1.77□□□□□ -2.13
AC004057.1-202ENST00000356247 HERC1Q15751 4861 aa1.77□□□□□ -2.13
AC004057.1-202ENST00000356247 SMR3BP02814 79 aaPredicted RBP1.76□□□□□ -2.13
AC004057.1-202ENST00000356247 PKHD1L1Q86WI1 4243 aa1.75□□□□□ -2.13
AC004057.1-202ENST00000356247 KRTAP5-4Q6L8H1 288 aa1.75□□□□□ -2.13
AC004057.1-202ENST00000356247 KRTAP10-4P60372 401 aaPredicted RBP1.73□□□□□ -2.13
AC004057.1-202ENST00000356247 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
AC004057.1-202ENST00000356247 FAT3Q8TDW7 4589 aa1.72□□□□□ -2.13
AC004057.1-202ENST00000356247 KRTAP5-9P26371 169 aa1.72□□□□□ -2.13
AC004057.1-202ENST00000356247 HMCN2Q8NDA2 5059 aa1.72□□□□□ -2.13
AC004057.1-202ENST00000356247 UBR4Q5T4S7 5183 aa1.7□□□□□ -2.14
AC004057.1-202ENST00000356247 LRP1Q07954 4544 aaKnown RBP1.7□□□□□ -2.14
AC004057.1-202ENST00000356247 OBSCNQ5VST9 7968 aa1.69□□□□□ -2.14
AC004057.1-202ENST00000356247 TNXBP22105 4242 aa1.69□□□□□ -2.14
AC004057.1-202ENST00000356247 MT1HL1P0DM35 61 aa1.69□□□□□ -2.14
AC004057.1-202ENST00000356247 KRTAP8-1Q8IUC2 63 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms