RNA–Protein interactions for RNA: ENST00000354361.3

SYF2-202, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2 BASIC

Gene SYF2, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-202ENST00000354361 C9orf92A6NGG3 77 aa2.28□□□□□ -2.04
SYF2-202ENST00000354361 MGAM2Q2M2H8 2515 aa2.28□□□□□ -2.04
SYF2-202ENST00000354361 DYNC2H1Q8NCM8 4307 aaKnown RBP2.28□□□□□ -2.05
SYF2-202ENST00000354361 COL7A1Q02388 2944 aa2.27□□□□□ -2.05
SYF2-202ENST00000354361 KRTAP10-4P60372 401 aaPredicted RBP2.27□□□□□ -2.05
SYF2-202ENST00000354361 NOTCH1P46531 2555 aa2.26□□□□□ -2.05
SYF2-202ENST00000354361 UQCR11O14957 56 aa2.26□□□□□ -2.05
SYF2-202ENST00000354361 SPINK7P58062 85 aa2.26□□□□□ -2.05
SYF2-202ENST00000354361 NBEAL1Q6ZS30 2694 aa2.26□□□□□ -2.05
SYF2-202ENST00000354361 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
SYF2-202ENST00000354361 RPL37P61927 97 aaKnown RBP2.24□□□□□ -2.05
SYF2-202ENST00000354361 Q5VV11 94 aa2.24□□□□□ -2.05
SYF2-202ENST00000354361 RBM12B-AS1Q9P1G2 102 aa2.24□□□□□ -2.05
SYF2-202ENST00000354361 CSMD3Q7Z407 3707 aa2.24□□□□□ -2.05
SYF2-202ENST00000354361 K7ERS5 55 aa2.23□□□□□ -2.05
SYF2-202ENST00000354361 TPRXLQ17RH7 258 aa2.23□□□□□ -2.05
SYF2-202ENST00000354361 COX6B2Q6YFQ2 88 aa2.23□□□□□ -2.05
SYF2-202ENST00000354361 STARD9Q9P2P6 4700 aa2.23□□□□□ -2.05
SYF2-202ENST00000354361 DNAH7Q8WXX0 4024 aa2.22□□□□□ -2.05
SYF2-202ENST00000354361 PRKDCP78527 4128 aaKnown RBP2.22□□□□□ -2.05
SYF2-202ENST00000354361 PMAIP1Q13794 54 aa2.22□□□□□ -2.05
SYF2-202ENST00000354361 LYSTQ99698 3801 aa2.22□□□□□ -2.05
SYF2-202ENST00000354361 PLECQ15149 4684 aaKnown RBP2.21□□□□□ -2.05
SYF2-202ENST00000354361 MIR22HGQ0VDD5 57 aa2.21□□□□□ -2.06
SYF2-202ENST00000354361 STAB2Q8WWQ8 2551 aa2.21□□□□□ -2.06
SYF2-202ENST00000354361 ALMS1Q8TCU4 4167 aa2.21□□□□□ -2.06
SYF2-202ENST00000354361 MEGF8Q7Z7M0 2845 aa2.21□□□□□ -2.06
SYF2-202ENST00000354361 VPS13DQ5THJ4 4388 aa2.21□□□□□ -2.06
SYF2-202ENST00000354361 DNAH10Q8IVF4 4471 aa2.19□□□□□ -2.06
SYF2-202ENST00000354361 DNAH6Q9C0G6 4158 aa2.19□□□□□ -2.06
SYF2-202ENST00000354361 KMT2AQ03164 3969 aa2.18□□□□□ -2.06
SYF2-202ENST00000354361 SPATA8Q6RVD6 105 aa2.18□□□□□ -2.06
SYF2-202ENST00000354361 S4R3F8 94 aa2.18□□□□□ -2.06
SYF2-202ENST00000354361 TENM2Q9NT68 2774 aa2.17□□□□□ -2.06
SYF2-202ENST00000354361 A0A1B0GU33 70 aa2.17□□□□□ -2.06
SYF2-202ENST00000354361 H1FX-AS1Q4G0G2 97 aa2.17□□□□□ -2.06
SYF2-202ENST00000354361 FBN3Q75N90 2809 aa2.16□□□□□ -2.06
SYF2-202ENST00000354361 DNAH17Q9UFH2 4485 aa2.16□□□□□ -2.06
SYF2-202ENST00000354361 MT1HL1P0DM35 61 aa2.15□□□□□ -2.07
SYF2-202ENST00000354361 CSAG1Q6PB30 78 aa2.15□□□□□ -2.07
SYF2-202ENST00000354361 LCA10Q71F78 164 aa2.15□□□□□ -2.07
SYF2-202ENST00000354361 PP632Q6XCG6 107 aa2.14□□□□□ -2.07
SYF2-202ENST00000354361 KTN1-AS1Q86SY8 53 aa2.14□□□□□ -2.07
SYF2-202ENST00000354361 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
SYF2-202ENST00000354361 HECTD4Q9Y4D8 3996 aa2.14□□□□□ -2.07
SYF2-202ENST00000354361 DNAH2Q9P225 4427 aa2.13□□□□□ -2.07
SYF2-202ENST00000354361 FRAS1Q86XX4 4008 aa2.13□□□□□ -2.07
SYF2-202ENST00000354361 TGP01266 2768 aa2.12□□□□□ -2.07
SYF2-202ENST00000354361 DNAH8Q96JB1 4490 aa2.11□□□□□ -2.07
SYF2-202ENST00000354361 PKD1P98161 4303 aa2.11□□□□□ -2.07
SYF2-202ENST00000354361 DNHD1Q96M86 4753 aa2.11□□□□□ -2.07
SYF2-202ENST00000354361 H0YAA0 97 aa2.1□□□□□ -2.07
SYF2-202ENST00000354361 M0QZ58 72 aa2.1□□□□□ -2.07
SYF2-202ENST00000354361 HYDINQ4G0P3 5121 aa2.1□□□□□ -2.07
SYF2-202ENST00000354361 A6NN06 94 aa2.09□□□□□ -2.07
SYF2-202ENST00000354361 SRRM2Q9UQ35 2752 aaKnown RBP2.09□□□□□ -2.08
SYF2-202ENST00000354361 DNAH11Q96DT5 4516 aa2.07□□□□□ -2.08
SYF2-202ENST00000354361 DNAH5Q8TE73 4624 aa2.07□□□□□ -2.08
SYF2-202ENST00000354361 FAT2Q9NYQ8 4349 aa2.07□□□□□ -2.08
SYF2-202ENST00000354361 ADM2Q7Z4H4 148 aa2.06□□□□□ -2.08
SYF2-202ENST00000354361 VPS13BQ7Z7G8 4022 aa2.06□□□□□ -2.08
SYF2-202ENST00000354361 R4GN34 69 aa2.05□□□□□ -2.08
SYF2-202ENST00000354361 LRP1BQ9NZR2 4599 aa2.05□□□□□ -2.08
SYF2-202ENST00000354361 CRIPTQ9P021 101 aa2.03□□□□□ -2.08
SYF2-202ENST00000354361 FLG2Q5D862 2391 aaPredicted RBP2.02□□□□□ -2.09
SYF2-202ENST00000354361 ROMO1P60602 79 aa2.02□□□□□ -2.09
SYF2-202ENST00000354361 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
SYF2-202ENST00000354361 A0A0D9SG42 100 aa2.01□□□□□ -2.09
SYF2-202ENST00000354361 SPINT4Q6UDR6 99 aa2.01□□□□□ -2.09
SYF2-202ENST00000354361 PKHD1P08F94 4074 aa2□□□□□ -2.09
SYF2-202ENST00000354361 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
SYF2-202ENST00000354361 SACSQ9NZJ4 4579 aa2□□□□□ -2.09
SYF2-202ENST00000354361 RYR2Q92736 4967 aa1.99□□□□□ -2.09
SYF2-202ENST00000354361 DYNC1H1Q14204 4646 aaKnown RBP1.99□□□□□ -2.09
SYF2-202ENST00000354361 P0C880 135 aa1.98□□□□□ -2.09
SYF2-202ENST00000354361 LINC01554Q52M75 96 aa1.98□□□□□ -2.09
SYF2-202ENST00000354361 APOBP04114 4563 aaKnown RBP1.98□□□□□ -2.09
SYF2-202ENST00000354361 PKHD1L1Q86WI1 4243 aa1.97□□□□□ -2.09
SYF2-202ENST00000354361 M0R2T5 61 aa1.96□□□□□ -2.1
SYF2-202ENST00000354361 KRTAP25-1Q3LHN0 102 aa1.96□□□□□ -2.1
SYF2-202ENST00000354361 CAMK2N1Q7Z7J9 78 aa1.95□□□□□ -2.1
SYF2-202ENST00000354361 KRTAP12-1P59990 96 aa1.93□□□□□ -2.1
SYF2-202ENST00000354361 KRTAP13-4Q3LI77 160 aa1.93□□□□□ -2.1
SYF2-202ENST00000354361 HSPG2P98160 4391 aa1.92□□□□□ -2.1
SYF2-202ENST00000354361 PLAC4Q8WY50 150 aa1.92□□□□□ -2.1
SYF2-202ENST00000354361 KMT2CQ8NEZ4 4911 aaKnown RBP1.92□□□□□ -2.1
SYF2-202ENST00000354361 RYR1P21817 5038 aa1.92□□□□□ -2.1
SYF2-202ENST00000354361 DMBT1Q9UGM3 2413 aaPredicted RBP1.91□□□□□ -2.1
SYF2-202ENST00000354361 TNXBP22105 4242 aa1.91□□□□□ -2.1
SYF2-202ENST00000354361 FAT1Q14517 4588 aa1.91□□□□□ -2.1
SYF2-202ENST00000354361 FAT3Q8TDW7 4589 aa1.9□□□□□ -2.1
SYF2-202ENST00000354361 KRTAP4-1Q9BYQ7 146 aa1.9□□□□□ -2.11
SYF2-202ENST00000354361 TNP1P09430 55 aa1.88□□□□□ -2.11
SYF2-202ENST00000354361 KRTAP19-2Q3LHN2 52 aa1.86□□□□□ -2.11
SYF2-202ENST00000354361 LRP1Q07954 4544 aaKnown RBP1.86□□□□□ -2.11
SYF2-202ENST00000354361 RYR3Q15413 4870 aa1.85□□□□□ -2.11
SYF2-202ENST00000354361 KIAA1109Q2LD37 5005 aa1.85□□□□□ -2.11
SYF2-202ENST00000354361 KRTAP10-10P60014 251 aa1.84□□□□□ -2.11
SYF2-202ENST00000354361 SPRR2GQ9BYE4 73 aa1.83□□□□□ -2.12
SYF2-202ENST00000354361 MT1HP80294 61 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms