RNA–Protein interactions for RNA: ENST00000354334.7

HDAC7-202, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HDAC7, Length 4,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-202ENST00000354334 LRP1BQ9NZR2 4599 aa6.38□□□□□ -1.39
HDAC7-202ENST00000354334 DNAH17Q9UFH2 4485 aa6.38□□□□□ -1.39
HDAC7-202ENST00000354334 TNP1P09430 55 aa6.38□□□□□ -1.39
HDAC7-202ENST00000354334 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
HDAC7-202ENST00000354334 KRTAP12-2P59991 146 aa6.35□□□□□ -1.39
HDAC7-202ENST00000354334 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
HDAC7-202ENST00000354334 DNAH7Q8WXX0 4024 aa6.33□□□□□ -1.4
HDAC7-202ENST00000354334 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
HDAC7-202ENST00000354334 DYNC1H1Q14204 4646 aaKnown RBP6.32□□□□□ -1.4
HDAC7-202ENST00000354334 DNAH2Q9P225 4427 aa6.3□□□□□ -1.4
HDAC7-202ENST00000354334 DNAH8Q96JB1 4490 aa6.3□□□□□ -1.4
HDAC7-202ENST00000354334 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
HDAC7-202ENST00000354334 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
HDAC7-202ENST00000354334 ALMS1Q8TCU4 4167 aa6.27□□□□□ -1.41
HDAC7-202ENST00000354334 NDUFAF8A1L188 74 aa6.27□□□□□ -1.41
HDAC7-202ENST00000354334 DNAH6Q9C0G6 4158 aa6.22□□□□□ -1.41
HDAC7-202ENST00000354334 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
HDAC7-202ENST00000354334 RYR1P21817 5038 aa6.19□□□□□ -1.42
HDAC7-202ENST00000354334 KIAA1109Q2LD37 5005 aa6.19□□□□□ -1.42
HDAC7-202ENST00000354334 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
HDAC7-202ENST00000354334 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
HDAC7-202ENST00000354334 A0A0A0MQY5 61 aa6.15□□□□□ -1.42
HDAC7-202ENST00000354334 VPS13BQ7Z7G8 4022 aa6.13□□□□□ -1.43
HDAC7-202ENST00000354334 FRAS1Q86XX4 4008 aa6.12□□□□□ -1.43
HDAC7-202ENST00000354334 SACSQ9NZJ4 4579 aa6.11□□□□□ -1.43
HDAC7-202ENST00000354334 FAT2Q9NYQ8 4349 aa6.07□□□□□ -1.44
HDAC7-202ENST00000354334 RYR3Q15413 4870 aa6.04□□□□□ -1.44
HDAC7-202ENST00000354334 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
HDAC7-202ENST00000354334 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
HDAC7-202ENST00000354334 HYDINQ4G0P3 5121 aa6.01□□□□□ -1.45
HDAC7-202ENST00000354334 APOBP04114 4563 aaKnown RBP6□□□□□ -1.45
HDAC7-202ENST00000354334 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
HDAC7-202ENST00000354334 KRTAP17-1Q9BYP8 105 aa5.94□□□□□ -1.46
HDAC7-202ENST00000354334 PKHD1P08F94 4074 aa5.94□□□□□ -1.46
HDAC7-202ENST00000354334 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
HDAC7-202ENST00000354334 LORP23490 312 aaPredicted RBP5.93□□□□□ -1.46
HDAC7-202ENST00000354334 KRTAP4-1Q9BYQ7 146 aa5.91□□□□□ -1.46
HDAC7-202ENST00000354334 PKD1P98161 4303 aa5.86□□□□□ -1.47
HDAC7-202ENST00000354334 RYR2Q92736 4967 aa5.83□□□□□ -1.48
HDAC7-202ENST00000354334 PKHD1L1Q86WI1 4243 aa5.83□□□□□ -1.48
HDAC7-202ENST00000354334 KMT2CQ8NEZ4 4911 aaKnown RBP5.82□□□□□ -1.48
HDAC7-202ENST00000354334 LRP2P98164 4655 aa5.76□□□□□ -1.49
HDAC7-202ENST00000354334 HERC2O95714 4834 aa5.7□□□□□ -1.5
HDAC7-202ENST00000354334 HSPG2P98160 4391 aa5.64□□□□□ -1.51
HDAC7-202ENST00000354334 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
HDAC7-202ENST00000354334 MT1HP80294 61 aa5.54□□□□□ -1.52
HDAC7-202ENST00000354334 KRTAP10-12P60413 245 aa5.53□□□□□ -1.52
HDAC7-202ENST00000354334 LPAP08519 4548 aa5.49□□□□□ -1.53
HDAC7-202ENST00000354334 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
HDAC7-202ENST00000354334 MT2AP02795 61 aa5.47□□□□□ -1.53
HDAC7-202ENST00000354334 EPPK1P58107 5090 aaKnown RBP5.47□□□□□ -1.53
HDAC7-202ENST00000354334 MT1FP04733 61 aa5.42□□□□□ -1.54
HDAC7-202ENST00000354334 SPRR2GQ9BYE4 73 aa5.41□□□□□ -1.54
HDAC7-202ENST00000354334 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
HDAC7-202ENST00000354334 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
HDAC7-202ENST00000354334 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
HDAC7-202ENST00000354334 ABCA13Q86UQ4 5058 aa5.33□□□□□ -1.56
HDAC7-202ENST00000354334 TNXBP22105 4242 aa5.33□□□□□ -1.56
HDAC7-202ENST00000354334 PCLOQ9Y6V0 5065 aa5.29□□□□□ -1.56
HDAC7-202ENST00000354334 KRTAP19-1Q8IUB9 90 aa5.28□□□□□ -1.56
HDAC7-202ENST00000354334 HERC1Q15751 4861 aa5.26□□□□□ -1.57
HDAC7-202ENST00000354334 LCE2CQ5TA81 110 aa5.22□□□□□ -1.57
HDAC7-202ENST00000354334 MUC2Q02817 5179 aa5.17□□□□□ -1.58
HDAC7-202ENST00000354334 KRTAP19-2Q3LHN2 52 aa5.16□□□□□ -1.58
HDAC7-202ENST00000354334 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
HDAC7-202ENST00000354334 KRTAP9-8Q9BYQ0 159 aa5.14□□□□□ -1.59
HDAC7-202ENST00000354334 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
HDAC7-202ENST00000354334 MUC17Q685J3 4493 aa5.09□□□□□ -1.59
HDAC7-202ENST00000354334 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
HDAC7-202ENST00000354334 RNF213Q63HN8 5207 aa5.06□□□□□ -1.6
HDAC7-202ENST00000354334 MT1BP07438 61 aa5.04□□□□□ -1.6
HDAC7-202ENST00000354334 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
HDAC7-202ENST00000354334 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
HDAC7-202ENST00000354334 MT1XP80297 61 aa5.01□□□□□ -1.61
HDAC7-202ENST00000354334 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
HDAC7-202ENST00000354334 FLGP20930 4061 aaPredicted RBP4.99□□□□□ -1.61
HDAC7-202ENST00000354334 KRTAP10-5P60370 271 aa4.97□□□□□ -1.61
HDAC7-202ENST00000354334 UBR4Q5T4S7 5183 aa4.96□□□□□ -1.62
HDAC7-202ENST00000354334 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
HDAC7-202ENST00000354334 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
HDAC7-202ENST00000354334 INE1O15225 51 aa4.91□□□□□ -1.62
HDAC7-202ENST00000354334 HMCN2Q8NDA2 5059 aa4.86□□□□□ -1.63
HDAC7-202ENST00000354334 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
HDAC7-202ENST00000354334 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
HDAC7-202ENST00000354334 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
HDAC7-202ENST00000354334 LCE2BO14633 110 aa4.81□□□□□ -1.64
HDAC7-202ENST00000354334 SPRR2FQ96RM1 72 aa4.78□□□□□ -1.64
HDAC7-202ENST00000354334 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
HDAC7-202ENST00000354334 LCE2AQ5TA79 106 aaPredicted RBP4.6□□□□□ -1.67
HDAC7-202ENST00000354334 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
HDAC7-202ENST00000354334 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
HDAC7-202ENST00000354334 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
HDAC7-202ENST00000354334 MT1GP13640 62 aa4.5□□□□□ -1.69
HDAC7-202ENST00000354334 USH2AO75445 5202 aa4.46□□□□□ -1.69
HDAC7-202ENST00000354334 MT1LQ93083 61 aa4.43□□□□□ -1.7
HDAC7-202ENST00000354334 MT1EP04732 61 aa4.43□□□□□ -1.7
HDAC7-202ENST00000354334 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
HDAC7-202ENST00000354334 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
HDAC7-202ENST00000354334 SPRR2EP22531 72 aa4.38□□□□□ -1.71
HDAC7-202ENST00000354334 SPRR2BP35325 72 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms