RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 DNAH2Q9P225 4427 aa7.29□□□□□ -1.24
SPPL3-201ENST00000353487 DNAH17Q9UFH2 4485 aa7.29□□□□□ -1.24
SPPL3-201ENST00000353487 LRP1BQ9NZR2 4599 aa7.27□□□□□ -1.25
SPPL3-201ENST00000353487 TNP1P09430 55 aa7.25□□□□□ -1.25
SPPL3-201ENST00000353487 HECTD4Q9Y4D8 3996 aa7.23□□□□□ -1.25
SPPL3-201ENST00000353487 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
SPPL3-201ENST00000353487 XP32Q5T750 250 aa7.19□□□□□ -1.26
SPPL3-201ENST00000353487 HYDINQ4G0P3 5121 aa7.18□□□□□ -1.26
SPPL3-201ENST00000353487 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
SPPL3-201ENST00000353487 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
SPPL3-201ENST00000353487 FAT1Q14517 4588 aa7.16□□□□□ -1.26
SPPL3-201ENST00000353487 DYNC2H1Q8NCM8 4307 aaKnown RBP7.15□□□□□ -1.26
SPPL3-201ENST00000353487 DNAH5Q8TE73 4624 aa7.13□□□□□ -1.27
SPPL3-201ENST00000353487 VPS13BQ7Z7G8 4022 aa7.09□□□□□ -1.27
SPPL3-201ENST00000353487 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
SPPL3-201ENST00000353487 KRTAP21-3Q3LHN1 58 aa7.05□□□□□ -1.28
SPPL3-201ENST00000353487 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.29
SPPL3-201ENST00000353487 A0A1B0GVY2 172 aa7.01□□□□□ -1.29
SPPL3-201ENST00000353487 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
SPPL3-201ENST00000353487 DYNC1H1Q14204 4646 aaKnown RBP6.99□□□□□ -1.29
SPPL3-201ENST00000353487 ALMS1Q8TCU4 4167 aa6.97□□□□□ -1.29
SPPL3-201ENST00000353487 MYCBP2O75592 4640 aa6.9□□□□□ -1.3
SPPL3-201ENST00000353487 FAT2Q9NYQ8 4349 aa6.89□□□□□ -1.31
SPPL3-201ENST00000353487 SACSQ9NZJ4 4579 aa6.87□□□□□ -1.31
SPPL3-201ENST00000353487 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
SPPL3-201ENST00000353487 LRP1Q07954 4544 aaKnown RBP6.85□□□□□ -1.31
SPPL3-201ENST00000353487 PKD1P98161 4303 aa6.83□□□□□ -1.32
SPPL3-201ENST00000353487 KMT2CQ8NEZ4 4911 aaKnown RBP6.82□□□□□ -1.32
SPPL3-201ENST00000353487 APOBP04114 4563 aaKnown RBP6.79□□□□□ -1.32
SPPL3-201ENST00000353487 KIAA1109Q2LD37 5005 aa6.76□□□□□ -1.33
SPPL3-201ENST00000353487 FAT3Q8TDW7 4589 aa6.73□□□□□ -1.33
SPPL3-201ENST00000353487 PRO2289Q9P1D8 64 aa6.67□□□□□ -1.34
SPPL3-201ENST00000353487 RYR1P21817 5038 aa6.65□□□□□ -1.34
SPPL3-201ENST00000353487 RYR2Q92736 4967 aa6.65□□□□□ -1.35
SPPL3-201ENST00000353487 RYR3Q15413 4870 aa6.65□□□□□ -1.35
SPPL3-201ENST00000353487 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
SPPL3-201ENST00000353487 KRTAP4-5Q9BYR2 181 aa6.61□□□□□ -1.35
SPPL3-201ENST00000353487 MT1HL1P0DM35 61 aa6.59□□□□□ -1.36
SPPL3-201ENST00000353487 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
SPPL3-201ENST00000353487 INE1O15225 51 aa6.49□□□□□ -1.37
SPPL3-201ENST00000353487 HSPG2P98160 4391 aa6.47□□□□□ -1.37
SPPL3-201ENST00000353487 LRP2P98164 4655 aa6.47□□□□□ -1.37
SPPL3-201ENST00000353487 PKHD1L1Q86WI1 4243 aa6.44□□□□□ -1.38
SPPL3-201ENST00000353487 KRTAP10-10P60014 251 aa6.41□□□□□ -1.38
SPPL3-201ENST00000353487 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
SPPL3-201ENST00000353487 LPAP08519 4548 aa6.36□□□□□ -1.39
SPPL3-201ENST00000353487 TNXBP22105 4242 aa6.3□□□□□ -1.4
SPPL3-201ENST00000353487 ABCA13Q86UQ4 5058 aa6.24□□□□□ -1.41
SPPL3-201ENST00000353487 KRTAP4-1Q9BYQ7 146 aa6.18□□□□□ -1.42
SPPL3-201ENST00000353487 HERC2O95714 4834 aa6.18□□□□□ -1.42
SPPL3-201ENST00000353487 MUC2Q02817 5179 aa6.11□□□□□ -1.43
SPPL3-201ENST00000353487 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
SPPL3-201ENST00000353487 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
SPPL3-201ENST00000353487 CRCT1Q9UGL9 99 aa5.94□□□□□ -1.46
SPPL3-201ENST00000353487 HERC1Q15751 4861 aa5.93□□□□□ -1.46
SPPL3-201ENST00000353487 KRTAP10-12P60413 245 aa5.9□□□□□ -1.46
SPPL3-201ENST00000353487 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
SPPL3-201ENST00000353487 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
SPPL3-201ENST00000353487 FAT4Q6V0I7 4981 aa5.84□□□□□ -1.48
SPPL3-201ENST00000353487 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
SPPL3-201ENST00000353487 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
SPPL3-201ENST00000353487 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
SPPL3-201ENST00000353487 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
SPPL3-201ENST00000353487 UBR4Q5T4S7 5183 aa5.67□□□□□ -1.5
SPPL3-201ENST00000353487 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
SPPL3-201ENST00000353487 KRTAP19-2Q3LHN2 52 aa5.66□□□□□ -1.5
SPPL3-201ENST00000353487 SPRR5A0A1B0GTR4 108 aa5.63□□□□□ -1.51
SPPL3-201ENST00000353487 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
SPPL3-201ENST00000353487 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
SPPL3-201ENST00000353487 MT1HP80294 61 aa5.55□□□□□ -1.52
SPPL3-201ENST00000353487 HMCN2Q8NDA2 5059 aa5.54□□□□□ -1.52
SPPL3-201ENST00000353487 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
SPPL3-201ENST00000353487 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
SPPL3-201ENST00000353487 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
SPPL3-201ENST00000353487 MT2AP02795 61 aa5.52□□□□□ -1.53
SPPL3-201ENST00000353487 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
SPPL3-201ENST00000353487 MT1FP04733 61 aa5.5□□□□□ -1.53
SPPL3-201ENST00000353487 FSIP2Q5CZC0 6907 aa5.45□□□□□ -1.54
SPPL3-201ENST00000353487 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
SPPL3-201ENST00000353487 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
SPPL3-201ENST00000353487 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
SPPL3-201ENST00000353487 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
SPPL3-201ENST00000353487 MT1XP80297 61 aa5.27□□□□□ -1.57
SPPL3-201ENST00000353487 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
SPPL3-201ENST00000353487 USH2AO75445 5202 aa5.21□□□□□ -1.58
SPPL3-201ENST00000353487 MT1BP07438 61 aa5.19□□□□□ -1.58
SPPL3-201ENST00000353487 KRTAP19-8Q3LI54 63 aa5.18□□□□□ -1.58
SPPL3-201ENST00000353487 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
SPPL3-201ENST00000353487 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
SPPL3-201ENST00000353487 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
SPPL3-201ENST00000353487 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
SPPL3-201ENST00000353487 KMT2DO14686 5537 aa5.05□□□□□ -1.6
SPPL3-201ENST00000353487 LCE2BO14633 110 aa4.99□□□□□ -1.61
SPPL3-201ENST00000353487 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
SPPL3-201ENST00000353487 MT1GP13640 62 aa4.84□□□□□ -1.63
SPPL3-201ENST00000353487 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
SPPL3-201ENST00000353487 KRTAP9-6A8MVA2 160 aa4.78□□□□□ -1.64
SPPL3-201ENST00000353487 SPRR2FQ96RM1 72 aa4.76□□□□□ -1.65
SPPL3-201ENST00000353487 LCE2AQ5TA79 106 aaPredicted RBP4.74□□□□□ -1.65
SPPL3-201ENST00000353487 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 477.8 ms