RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 DNAH2Q9P225 4427 aa4.43□□□□□ -1.7
UBE2D3-204ENST00000349311 Q5W150 140 aa4.43□□□□□ -1.7
UBE2D3-204ENST00000349311 IGLV7-43P04211 117 aa4.42□□□□□ -1.7
UBE2D3-204ENST00000349311 SACSQ9NZJ4 4579 aa4.42□□□□□ -1.7
UBE2D3-204ENST00000349311 RYR2Q92736 4967 aa4.41□□□□□ -1.7
UBE2D3-204ENST00000349311 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
UBE2D3-204ENST00000349311 KRTAP11-1Q8IUC1 163 aa4.41□□□□□ -1.7
UBE2D3-204ENST00000349311 DNAH17Q9UFH2 4485 aa4.4□□□□□ -1.7
UBE2D3-204ENST00000349311 CHTF8P0CG12 524 aa4.39□□□□□ -1.71
UBE2D3-204ENST00000349311 ROMO1P60602 79 aa4.39□□□□□ -1.71
UBE2D3-204ENST00000349311 HYDINQ4G0P3 5121 aa4.38□□□□□ -1.71
UBE2D3-204ENST00000349311 EPPK1P58107 5090 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-204ENST00000349311 A0A087WTM6 91 aa4.37□□□□□ -1.71
UBE2D3-204ENST00000349311 A8MUU9 505 aa4.35□□□□□ -1.71
UBE2D3-204ENST00000349311 LY6G6CO95867 125 aa4.35□□□□□ -1.71
UBE2D3-204ENST00000349311 SPINK6Q6UWN8 80 aa4.35□□□□□ -1.71
UBE2D3-204ENST00000349311 BIRC6Q9NR09 4857 aa4.33□□□□□ -1.72
UBE2D3-204ENST00000349311 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
UBE2D3-204ENST00000349311 PKD1P98161 4303 aa4.32□□□□□ -1.72
UBE2D3-204ENST00000349311 DNAH11Q96DT5 4516 aa4.31□□□□□ -1.72
UBE2D3-204ENST00000349311 DNAH8Q96JB1 4490 aa4.3□□□□□ -1.72
UBE2D3-204ENST00000349311 K7ERS5 55 aa4.3□□□□□ -1.72
UBE2D3-204ENST00000349311 SSBP3-AS1Q7Z2R9 100 aa4.3□□□□□ -1.72
UBE2D3-204ENST00000349311 SPACA4Q8TDM5 124 aa4.3□□□□□ -1.72
UBE2D3-204ENST00000349311 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
UBE2D3-204ENST00000349311 LINC00304Q8N9R0 145 aa4.29□□□□□ -1.72
UBE2D3-204ENST00000349311 DNAH5Q8TE73 4624 aa4.27□□□□□ -1.73
UBE2D3-204ENST00000349311 PANO1I0J062 215 aa4.27□□□□□ -1.73
UBE2D3-204ENST00000349311 TYMSOSQ8TAI1 123 aa4.26□□□□□ -1.73
UBE2D3-204ENST00000349311 CIRBP-AS1Q8TBR5 109 aa4.26□□□□□ -1.73
UBE2D3-204ENST00000349311 H0YAA0 97 aa4.25□□□□□ -1.73
UBE2D3-204ENST00000349311 Q6ZSA8 131 aa4.25□□□□□ -1.73
UBE2D3-204ENST00000349311 PSORS1C2Q9UIG4 136 aa4.25□□□□□ -1.73
UBE2D3-204ENST00000349311 A0A1B0GU33 70 aa4.24□□□□□ -1.73
UBE2D3-204ENST00000349311 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
UBE2D3-204ENST00000349311 ANAPC11Q9NYG5 84 aa4.24□□□□□ -1.73
UBE2D3-204ENST00000349311 PKHD1P08F94 4074 aa4.24□□□□□ -1.73
UBE2D3-204ENST00000349311 SPINK1P00995 79 aa4.22□□□□□ -1.73
UBE2D3-204ENST00000349311 P0C880 135 aa4.21□□□□□ -1.74
UBE2D3-204ENST00000349311 SRRM2Q9UQ35 2752 aaKnown RBP4.2□□□□□ -1.74
UBE2D3-204ENST00000349311 KRTAP10-1P60331 282 aa4.18□□□□□ -1.74
UBE2D3-204ENST00000349311 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
UBE2D3-204ENST00000349311 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
UBE2D3-204ENST00000349311 RYR1P21817 5038 aa4.17□□□□□ -1.74
UBE2D3-204ENST00000349311 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
UBE2D3-204ENST00000349311 HERC2O95714 4834 aa4.16□□□□□ -1.74
UBE2D3-204ENST00000349311 PCLOQ9Y6V0 5065 aa4.15□□□□□ -1.74
UBE2D3-204ENST00000349311 LRP1BQ9NZR2 4599 aa4.15□□□□□ -1.75
UBE2D3-204ENST00000349311 DYNC1H1Q14204 4646 aaKnown RBP4.14□□□□□ -1.75
UBE2D3-204ENST00000349311 PKHD1L1Q86WI1 4243 aa4.13□□□□□ -1.75
UBE2D3-204ENST00000349311 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
UBE2D3-204ENST00000349311 APOBP04114 4563 aaKnown RBP4.11□□□□□ -1.75
UBE2D3-204ENST00000349311 CRIPTQ9P021 101 aa4.09□□□□□ -1.75
UBE2D3-204ENST00000349311 KIAA1109Q2LD37 5005 aa4.09□□□□□ -1.76
UBE2D3-204ENST00000349311 RPL37P61927 97 aaKnown RBP4.08□□□□□ -1.76
UBE2D3-204ENST00000349311 COX6B2Q6YFQ2 88 aa4.08□□□□□ -1.76
UBE2D3-204ENST00000349311 KRTAP13-2Q52LG2 175 aa4.07□□□□□ -1.76
UBE2D3-204ENST00000349311 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
UBE2D3-204ENST00000349311 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
UBE2D3-204ENST00000349311 TPRXLQ17RH7 258 aa4.04□□□□□ -1.76
UBE2D3-204ENST00000349311 KRTAP10-4P60372 401 aaPredicted RBP4.03□□□□□ -1.76
UBE2D3-204ENST00000349311 HSPG2P98160 4391 aa4.02□□□□□ -1.77
UBE2D3-204ENST00000349311 RPS29P62273 56 aaKnown RBP4.02□□□□□ -1.77
UBE2D3-204ENST00000349311 KRTAP12-2P59991 146 aa4□□□□□ -1.77
UBE2D3-204ENST00000349311 FAT1Q14517 4588 aa3.98□□□□□ -1.77
UBE2D3-204ENST00000349311 SMR3BP02814 79 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-204ENST00000349311 FLG2Q5D862 2391 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-204ENST00000349311 TNXBP22105 4242 aa3.93□□□□□ -1.78
UBE2D3-204ENST00000349311 Q5VSD8 79 aa3.92□□□□□ -1.78
UBE2D3-204ENST00000349311 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
UBE2D3-204ENST00000349311 HERC1Q15751 4861 aa3.92□□□□□ -1.78
UBE2D3-204ENST00000349311 A0A0D9SG42 100 aa3.91□□□□□ -1.78
UBE2D3-204ENST00000349311 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
UBE2D3-204ENST00000349311 S4R3F8 94 aa3.9□□□□□ -1.79
UBE2D3-204ENST00000349311 KRTAP10-8P60410 259 aa3.89□□□□□ -1.79
UBE2D3-204ENST00000349311 FAT3Q8TDW7 4589 aa3.88□□□□□ -1.79
UBE2D3-204ENST00000349311 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
UBE2D3-204ENST00000349311 C9orf92A6NGG3 77 aa3.86□□□□□ -1.79
UBE2D3-204ENST00000349311 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
UBE2D3-204ENST00000349311 DMBT1Q9UGM3 2413 aaPredicted RBP3.86□□□□□ -1.79
UBE2D3-204ENST00000349311 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
UBE2D3-204ENST00000349311 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
UBE2D3-204ENST00000349311 LRP1Q07954 4544 aaKnown RBP3.83□□□□□ -1.8
UBE2D3-204ENST00000349311 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
UBE2D3-204ENST00000349311 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
UBE2D3-204ENST00000349311 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
UBE2D3-204ENST00000349311 M0QZ58 72 aa3.77□□□□□ -1.81
UBE2D3-204ENST00000349311 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
UBE2D3-204ENST00000349311 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
UBE2D3-204ENST00000349311 UBR4Q5T4S7 5183 aa3.7□□□□□ -1.82
UBE2D3-204ENST00000349311 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
UBE2D3-204ENST00000349311 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
UBE2D3-204ENST00000349311 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
UBE2D3-204ENST00000349311 RNF213Q63HN8 5207 aa3.59□□□□□ -1.83
UBE2D3-204ENST00000349311 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
UBE2D3-204ENST00000349311 LRP2P98164 4655 aa3.58□□□□□ -1.84
UBE2D3-204ENST00000349311 R4GN34 69 aa3.54□□□□□ -1.84
UBE2D3-204ENST00000349311 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
UBE2D3-204ENST00000349311 LPAP08519 4548 aa3.53□□□□□ -1.84
UBE2D3-204ENST00000349311 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms