RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 AEBP2Q6ZN18 517 aaPredicted RBP30.97■■■□□ 2.55
UBE2D3-204ENST00000349311 CHIC1Q5VXU3 224 aa30.3■■■□□ 2.44
UBE2D3-204ENST00000349311 PHF23Q9BUL5 403 aaPredicted RBP26.7■■□□□ 1.86
UBE2D3-204ENST00000349311 SENP3Q9H4L4 574 aaPredicted RBP26.17■■□□□ 1.78
UBE2D3-204ENST00000349311 PLPPR3Q6T4P5 718 aa24.59■■□□□ 1.53
UBE2D3-204ENST00000349311 FOXD1Q16676 465 aa24.33■■□□□ 1.49
UBE2D3-204ENST00000349311 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
UBE2D3-204ENST00000349311 ADRA2BP18089 450 aa23.4■■□□□ 1.34
UBE2D3-204ENST00000349311 PIAS4Q8N2W9 510 aaPredicted RBP22.85■■□□□ 1.25
UBE2D3-204ENST00000349311 MSH5O43196 834 aa22.35■■□□□ 1.17
UBE2D3-204ENST00000349311 PPP4R3CPQ6ZMV5 832 aa21.67■■□□□ 1.06
UBE2D3-204ENST00000349311 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-204ENST00000349311 KCNA4P22459 653 aa21.26■□□□□ 0.99
UBE2D3-204ENST00000349311 MAPK8IP2Q13387 824 aaPredicted RBP21.23■□□□□ 0.99
UBE2D3-204ENST00000349311 CNKSR2Q8WXI2 1034 aa21.07■□□□□ 0.96
UBE2D3-204ENST00000349311 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
UBE2D3-204ENST00000349311 DMRT2Q9Y5R5 561 aa20.96■□□□□ 0.95
UBE2D3-204ENST00000349311 NPM3O75607 178 aaKnown RBP20.85■□□□□ 0.93
UBE2D3-204ENST00000349311 RNF216Q9NWF9 866 aaPredicted RBP20.66■□□□□ 0.9
UBE2D3-204ENST00000349311 HOXD11P31277 338 aaPredicted RBP20.61■□□□□ 0.89
UBE2D3-204ENST00000349311 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
UBE2D3-204ENST00000349311 POTEDQ86YR6 584 aa20.24■□□□□ 0.83
UBE2D3-204ENST00000349311 SLC4A1APQ9BWU0 796 aaKnown RBP20.2■□□□□ 0.82
UBE2D3-204ENST00000349311 DCAF8L1A6NGE4 600 aa19.79■□□□□ 0.76
UBE2D3-204ENST00000349311 SLC4A2P04920 1241 aa19.71■□□□□ 0.75
UBE2D3-204ENST00000349311 ZBTB22O15209 634 aa19.62■□□□□ 0.73
UBE2D3-204ENST00000349311 EHMT2Q96KQ7 1210 aa19.62■□□□□ 0.73
UBE2D3-204ENST00000349311 CSRNP3Q8WYN3 585 aa19.57■□□□□ 0.72
UBE2D3-204ENST00000349311 FOXD4L1Q9NU39 408 aa19.54■□□□□ 0.72
UBE2D3-204ENST00000349311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.7
UBE2D3-204ENST00000349311 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
UBE2D3-204ENST00000349311 MYCNP04198 464 aaPredicted RBP19.22■□□□□ 0.67
UBE2D3-204ENST00000349311 RNF39Q9H2S5 420 aa19.22■□□□□ 0.67
UBE2D3-204ENST00000349311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
UBE2D3-204ENST00000349311 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
UBE2D3-204ENST00000349311 C1QBPQ07021 282 aaKnown RBP18.97■□□□□ 0.63
UBE2D3-204ENST00000349311 ATXN8OSP0DMR3 200 aa18.92■□□□□ 0.62
UBE2D3-204ENST00000349311 SAMD1Q6SPF0 538 aaPredicted RBP18.92■□□□□ 0.62
UBE2D3-204ENST00000349311 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
UBE2D3-204ENST00000349311 APLP2Q06481 763 aa18.73■□□□□ 0.59
UBE2D3-204ENST00000349311 SPINK5Q9NQ38 1064 aaPredicted RBP18.66■□□□□ 0.58
UBE2D3-204ENST00000349311 CACNB1Q02641 598 aaPredicted RBP18.51■□□□□ 0.55
UBE2D3-204ENST00000349311 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
UBE2D3-204ENST00000349311 CAPN15O75808 1086 aa18.48■□□□□ 0.55
UBE2D3-204ENST00000349311 TRHP20396 242 aaPredicted RBP18.41■□□□□ 0.54
UBE2D3-204ENST00000349311 DSG3P32926 999 aa18.31■□□□□ 0.52
UBE2D3-204ENST00000349311 POLA2Q14181 598 aa18.21■□□□□ 0.51
UBE2D3-204ENST00000349311 ABCB7O75027 752 aa18.14■□□□□ 0.49
UBE2D3-204ENST00000349311 MKRN4PQ13434 485 aaPredicted RBP17.96■□□□□ 0.47
UBE2D3-204ENST00000349311 ZBTB12Q9Y330 459 aaPredicted RBP17.9■□□□□ 0.46
UBE2D3-204ENST00000349311 FBLN2P98095 1184 aa17.82■□□□□ 0.44
UBE2D3-204ENST00000349311 OSCARQ8IYS5 282 aa17.57■□□□□ 0.4
UBE2D3-204ENST00000349311 FKBP8Q14318 412 aa17.55■□□□□ 0.4
UBE2D3-204ENST00000349311 SPDYE4A6NLX3 237 aa17.49■□□□□ 0.39
UBE2D3-204ENST00000349311 SPDYE2BA6NHP3 402 aa17.47■□□□□ 0.39
UBE2D3-204ENST00000349311 SPDYE6P0CI01 402 aa17.47■□□□□ 0.39
UBE2D3-204ENST00000349311 SPDYE2Q495Y8 402 aa17.47■□□□□ 0.39
UBE2D3-204ENST00000349311 SSUH2Q9Y2M2 353 aa17.42■□□□□ 0.38
UBE2D3-204ENST00000349311 PROM2Q8N271 834 aa17.41■□□□□ 0.38
UBE2D3-204ENST00000349311 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-204ENST00000349311 ZNF692Q9BU19 519 aaPredicted RBP17.35■□□□□ 0.37
UBE2D3-204ENST00000349311 AKT1S1Q96B36 256 aa17.21■□□□□ 0.35
UBE2D3-204ENST00000349311 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
UBE2D3-204ENST00000349311 REM2Q8IYK8 340 aaPredicted RBP17.04■□□□□ 0.32
UBE2D3-204ENST00000349311 FBXO3Q9UK99 471 aa16.93■□□□□ 0.3
UBE2D3-204ENST00000349311 SPDYE1Q8NFV5 336 aaPredicted RBP16.89■□□□□ 0.29
UBE2D3-204ENST00000349311 STAG3Q9UJ98 1225 aa16.89■□□□□ 0.29
UBE2D3-204ENST00000349311 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
UBE2D3-204ENST00000349311 CLEC11AQ9Y240 323 aa16.72■□□□□ 0.27
UBE2D3-204ENST00000349311 VASPP50552 380 aaPredicted RBP16.71■□□□□ 0.27
UBE2D3-204ENST00000349311 PRR29P0C7W0 189 aa16.64■□□□□ 0.25
UBE2D3-204ENST00000349311 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
UBE2D3-204ENST00000349311 FXR2P51116 673 aaKnown RBP eCLIP16.58■□□□□ 0.24
UBE2D3-204ENST00000349311 IFNLR1Q8IU57 520 aaPredicted RBP16.56■□□□□ 0.24
UBE2D3-204ENST00000349311 CREBZFQ9NS37 354 aa16.56■□□□□ 0.24
UBE2D3-204ENST00000349311 MIER1Q8N108 512 aa16.52■□□□□ 0.24
UBE2D3-204ENST00000349311 MNX1P50219 401 aaPredicted RBP16.48■□□□□ 0.23
UBE2D3-204ENST00000349311 PLCD3Q8N3E9 789 aa16.47■□□□□ 0.23
UBE2D3-204ENST00000349311 PIP4P2Q8N4L2 257 aa16.45■□□□□ 0.22
UBE2D3-204ENST00000349311 CHADLQ6NUI6 762 aa16.38■□□□□ 0.21
UBE2D3-204ENST00000349311 PLEKHG5O94827 1062 aa16.37■□□□□ 0.21
UBE2D3-204ENST00000349311 PRKAR2AP13861 404 aaKnown RBP16.37■□□□□ 0.21
UBE2D3-204ENST00000349311 ZBTB47Q9UFB7 747 aaPredicted RBP16.35■□□□□ 0.21
UBE2D3-204ENST00000349311 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
UBE2D3-204ENST00000349311 FARP1Q9Y4F1 1045 aaPredicted RBP16.28■□□□□ 0.2
UBE2D3-204ENST00000349311 SPOCK2Q92563 424 aa16.27■□□□□ 0.2
UBE2D3-204ENST00000349311 NUBP1P53384 320 aa16.24■□□□□ 0.19
UBE2D3-204ENST00000349311 NPM1P06748 294 aaKnown RBP eCLIP16.18■□□□□ 0.18
UBE2D3-204ENST00000349311 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-204ENST00000349311 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-204ENST00000349311 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
UBE2D3-204ENST00000349311 PKD2Q13563 968 aa16.05■□□□□ 0.16
UBE2D3-204ENST00000349311 POTEHQ6S545 545 aa16.01■□□□□ 0.15
UBE2D3-204ENST00000349311 C19orf67A6NJJ6 358 aa16■□□□□ 0.15
UBE2D3-204ENST00000349311 GSE1Q14687 1217 aa15.99■□□□□ 0.15
UBE2D3-204ENST00000349311 FAM212AQ96EL1 285 aa15.97■□□□□ 0.15
UBE2D3-204ENST00000349311 DCAF8Q5TAQ9 597 aa15.93■□□□□ 0.14
UBE2D3-204ENST00000349311 CCDC61Q9Y6R9 512 aa15.91■□□□□ 0.14
UBE2D3-204ENST00000349311 CIZ1Q9ULV3 898 aaPredicted RBP15.9■□□□□ 0.14
UBE2D3-204ENST00000349311 CD44P16070 742 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms