RNA–Protein interactions for RNA: ENST00000345254.8

SEC24C-202, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24C, Length 4,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-202ENST00000345254 FAT1Q14517 4588 aa4.78□□□□□ -1.64
SEC24C-202ENST00000345254 DYNC1H1Q14204 4646 aaKnown RBP4.76□□□□□ -1.65
SEC24C-202ENST00000345254 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
SEC24C-202ENST00000345254 HERC2O95714 4834 aa4.74□□□□□ -1.65
SEC24C-202ENST00000345254 P0C880 135 aa4.72□□□□□ -1.65
SEC24C-202ENST00000345254 KMT2CQ8NEZ4 4911 aaKnown RBP4.71□□□□□ -1.66
SEC24C-202ENST00000345254 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
SEC24C-202ENST00000345254 LRP1BQ9NZR2 4599 aa4.69□□□□□ -1.66
SEC24C-202ENST00000345254 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
SEC24C-202ENST00000345254 RYR2Q92736 4967 aa4.65□□□□□ -1.67
SEC24C-202ENST00000345254 LYSTQ99698 3801 aa4.64□□□□□ -1.67
SEC24C-202ENST00000345254 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
SEC24C-202ENST00000345254 SACSQ9NZJ4 4579 aa4.62□□□□□ -1.67
SEC24C-202ENST00000345254 VPS13DQ5THJ4 4388 aa4.61□□□□□ -1.67
SEC24C-202ENST00000345254 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
SEC24C-202ENST00000345254 KRTAP13-4Q3LI77 160 aa4.59□□□□□ -1.67
SEC24C-202ENST00000345254 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
SEC24C-202ENST00000345254 KMT2AQ03164 3969 aa4.59□□□□□ -1.68
SEC24C-202ENST00000345254 TNP1P09430 55 aa4.57□□□□□ -1.68
SEC24C-202ENST00000345254 PCLOQ9Y6V0 5065 aa4.56□□□□□ -1.68
SEC24C-202ENST00000345254 DNAH10Q8IVF4 4471 aa4.55□□□□□ -1.68
SEC24C-202ENST00000345254 KRTAP3-2Q9BYR7 98 aa4.55□□□□□ -1.68
SEC24C-202ENST00000345254 KRTAP3-3Q9BYR6 98 aa4.54□□□□□ -1.68
SEC24C-202ENST00000345254 EPPK1P58107 5090 aaKnown RBP4.52□□□□□ -1.69
SEC24C-202ENST00000345254 APOBP04114 4563 aaKnown RBP4.51□□□□□ -1.69
SEC24C-202ENST00000345254 FAT2Q9NYQ8 4349 aa4.5□□□□□ -1.69
SEC24C-202ENST00000345254 FAT3Q8TDW7 4589 aa4.5□□□□□ -1.69
SEC24C-202ENST00000345254 VPS13BQ7Z7G8 4022 aa4.49□□□□□ -1.69
SEC24C-202ENST00000345254 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
SEC24C-202ENST00000345254 DNAH17Q9UFH2 4485 aa4.47□□□□□ -1.69
SEC24C-202ENST00000345254 DYNC2H1Q8NCM8 4307 aaKnown RBP4.45□□□□□ -1.7
SEC24C-202ENST00000345254 MYCBP2O75592 4640 aa4.44□□□□□ -1.7
SEC24C-202ENST00000345254 LRP1Q07954 4544 aaKnown RBP4.43□□□□□ -1.7
SEC24C-202ENST00000345254 LRP2P98164 4655 aa4.4□□□□□ -1.7
SEC24C-202ENST00000345254 DNAH2Q9P225 4427 aa4.4□□□□□ -1.71
SEC24C-202ENST00000345254 KRTAP4-1Q9BYQ7 146 aa4.39□□□□□ -1.71
SEC24C-202ENST00000345254 CMYA5Q8N3K9 4069 aa4.39□□□□□ -1.71
SEC24C-202ENST00000345254 DNAH3Q8TD57 4116 aa4.37□□□□□ -1.71
SEC24C-202ENST00000345254 DNAH8Q96JB1 4490 aa4.36□□□□□ -1.71
SEC24C-202ENST00000345254 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
SEC24C-202ENST00000345254 PKHD1P08F94 4074 aa4.35□□□□□ -1.71
SEC24C-202ENST00000345254 MT1HP80294 61 aa4.34□□□□□ -1.72
SEC24C-202ENST00000345254 LORP23490 312 aaPredicted RBP4.33□□□□□ -1.72
SEC24C-202ENST00000345254 DNAH6Q9C0G6 4158 aa4.33□□□□□ -1.72
SEC24C-202ENST00000345254 HSPG2P98160 4391 aa4.3□□□□□ -1.72
SEC24C-202ENST00000345254 UBR4Q5T4S7 5183 aa4.29□□□□□ -1.72
SEC24C-202ENST00000345254 FSIP2Q5CZC0 6907 aa4.28□□□□□ -1.72
SEC24C-202ENST00000345254 HERC1Q15751 4861 aa4.27□□□□□ -1.73
SEC24C-202ENST00000345254 DNAH7Q8WXX0 4024 aa4.22□□□□□ -1.73
SEC24C-202ENST00000345254 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
SEC24C-202ENST00000345254 MT2AP02795 61 aa4.16□□□□□ -1.74
SEC24C-202ENST00000345254 KRTAP9-2Q9BYQ4 174 aa4.14□□□□□ -1.75
SEC24C-202ENST00000345254 HECTD4Q9Y4D8 3996 aa4.13□□□□□ -1.75
SEC24C-202ENST00000345254 FRAS1Q86XX4 4008 aa4.11□□□□□ -1.75
SEC24C-202ENST00000345254 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
SEC24C-202ENST00000345254 RNF213Q63HN8 5207 aa4.1□□□□□ -1.75
SEC24C-202ENST00000345254 MT1FP04733 61 aa4.09□□□□□ -1.75
SEC24C-202ENST00000345254 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
SEC24C-202ENST00000345254 INE1O15225 51 aa4.03□□□□□ -1.77
SEC24C-202ENST00000345254 PKD1P98161 4303 aa4.02□□□□□ -1.77
SEC24C-202ENST00000345254 LPAP08519 4548 aa4.01□□□□□ -1.77
SEC24C-202ENST00000345254 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
SEC24C-202ENST00000345254 PKHD1L1Q86WI1 4243 aa3.98□□□□□ -1.77
SEC24C-202ENST00000345254 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
SEC24C-202ENST00000345254 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
SEC24C-202ENST00000345254 LCE2CQ5TA81 110 aa3.94□□□□□ -1.78
SEC24C-202ENST00000345254 FAT4Q6V0I7 4981 aa3.93□□□□□ -1.78
SEC24C-202ENST00000345254 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
SEC24C-202ENST00000345254 KRTAP19-1Q8IUB9 90 aa3.88□□□□□ -1.79
SEC24C-202ENST00000345254 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
SEC24C-202ENST00000345254 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
SEC24C-202ENST00000345254 LCE2AQ5TA79 106 aaPredicted RBP3.87□□□□□ -1.79
SEC24C-202ENST00000345254 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
SEC24C-202ENST00000345254 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
SEC24C-202ENST00000345254 MUC2Q02817 5179 aa3.8□□□□□ -1.8
SEC24C-202ENST00000345254 SPRR2EP22531 72 aa3.78□□□□□ -1.8
SEC24C-202ENST00000345254 SPRR2BP35325 72 aa3.78□□□□□ -1.8
SEC24C-202ENST00000345254 SPRR2AP35326 72 aa3.78□□□□□ -1.8
SEC24C-202ENST00000345254 KRTAP9-3Q9BYQ3 159 aa3.77□□□□□ -1.81
SEC24C-202ENST00000345254 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
SEC24C-202ENST00000345254 LCE2DQ5TA82 110 aaPredicted RBP3.77□□□□□ -1.81
SEC24C-202ENST00000345254 KRTAP19-2Q3LHN2 52 aa3.76□□□□□ -1.81
SEC24C-202ENST00000345254 LCE2BO14633 110 aa3.74□□□□□ -1.81
SEC24C-202ENST00000345254 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
SEC24C-202ENST00000345254 TNXBP22105 4242 aa3.7□□□□□ -1.82
SEC24C-202ENST00000345254 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
SEC24C-202ENST00000345254 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
SEC24C-202ENST00000345254 MT1BP07438 61 aa3.65□□□□□ -1.82
SEC24C-202ENST00000345254 SPRR2DP22532 72 aa3.65□□□□□ -1.82
SEC24C-202ENST00000345254 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
SEC24C-202ENST00000345254 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
SEC24C-202ENST00000345254 MUC17Q685J3 4493 aa3.6□□□□□ -1.83
SEC24C-202ENST00000345254 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
SEC24C-202ENST00000345254 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.57□□□□□ -1.84
SEC24C-202ENST00000345254 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
SEC24C-202ENST00000345254 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
SEC24C-202ENST00000345254 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
SEC24C-202ENST00000345254 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
SEC24C-202ENST00000345254 KRTAP19-4Q3LI73 84 aa3.54□□□□□ -1.84
SEC24C-202ENST00000345254 MT1XP80297 61 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms