RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPG-201ENST00000342711 ZNF469Q96JG9 3925 aaPredicted RBP7.03□□□□□ -1.28
CDC42BPG-201ENST00000342711 DNAH9Q9NYC9 4486 aa6.98□□□□□ -1.29
CDC42BPG-201ENST00000342711 AKAP9Q99996 3911 aa6.93□□□□□ -1.3
CDC42BPG-201ENST00000342711 KRTAP10-5P60370 271 aa6.85□□□□□ -1.31
CDC42BPG-201ENST00000342711 KRTAP8-1Q8IUC2 63 aa6.73□□□□□ -1.33
CDC42BPG-201ENST00000342711 DNAH1Q9P2D7 4330 aa6.73□□□□□ -1.33
CDC42BPG-201ENST00000342711 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.34
CDC42BPG-201ENST00000342711 DNAH10Q8IVF4 4471 aa6.69□□□□□ -1.34
CDC42BPG-201ENST00000342711 VPS13DQ5THJ4 4388 aa6.67□□□□□ -1.34
CDC42BPG-201ENST00000342711 PLECQ15149 4684 aaKnown RBP6.66□□□□□ -1.34
CDC42BPG-201ENST00000342711 DNAH11Q96DT5 4516 aa6.65□□□□□ -1.34
CDC42BPG-201ENST00000342711 DNAH17Q9UFH2 4485 aa6.63□□□□□ -1.35
CDC42BPG-201ENST00000342711 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
CDC42BPG-201ENST00000342711 CSMD3Q7Z407 3707 aa6.55□□□□□ -1.36
CDC42BPG-201ENST00000342711 DNAH2Q9P225 4427 aa6.54□□□□□ -1.36
CDC42BPG-201ENST00000342711 DNAH3Q8TD57 4116 aa6.49□□□□□ -1.37
CDC42BPG-201ENST00000342711 DYNC1H1Q14204 4646 aaKnown RBP6.47□□□□□ -1.37
CDC42BPG-201ENST00000342711 MT1HP80294 61 aa6.47□□□□□ -1.37
CDC42BPG-201ENST00000342711 DNHD1Q96M86 4753 aa6.46□□□□□ -1.38
CDC42BPG-201ENST00000342711 ANK2Q01484 3957 aa6.43□□□□□ -1.38
CDC42BPG-201ENST00000342711 DYNC2H1Q8NCM8 4307 aaKnown RBP6.42□□□□□ -1.38
CDC42BPG-201ENST00000342711 STARD9Q9P2P6 4700 aa6.42□□□□□ -1.38
CDC42BPG-201ENST00000342711 MT2AP02795 61 aa6.4□□□□□ -1.38
CDC42BPG-201ENST00000342711 LRP1BQ9NZR2 4599 aa6.4□□□□□ -1.38
CDC42BPG-201ENST00000342711 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
CDC42BPG-201ENST00000342711 FAT2Q9NYQ8 4349 aa6.38□□□□□ -1.39
CDC42BPG-201ENST00000342711 SACSQ9NZJ4 4579 aa6.34□□□□□ -1.39
CDC42BPG-201ENST00000342711 KRTAP19-5Q3LI72 72 aa6.34□□□□□ -1.39
CDC42BPG-201ENST00000342711 DNAH6Q9C0G6 4158 aa6.31□□□□□ -1.4
CDC42BPG-201ENST00000342711 LCE3CQ5T5A8 94 aa6.28□□□□□ -1.4
CDC42BPG-201ENST00000342711 MT1FP04733 61 aa6.27□□□□□ -1.41
CDC42BPG-201ENST00000342711 PRKDCP78527 4128 aaKnown RBP6.26□□□□□ -1.41
CDC42BPG-201ENST00000342711 KRTAP10-7P60409 375 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPG-201ENST00000342711 DNAH8Q96JB1 4490 aa6.23□□□□□ -1.41
CDC42BPG-201ENST00000342711 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
CDC42BPG-201ENST00000342711 FAT1Q14517 4588 aa6.21□□□□□ -1.42
CDC42BPG-201ENST00000342711 CMYA5Q8N3K9 4069 aa6.15□□□□□ -1.43
CDC42BPG-201ENST00000342711 RYR1P21817 5038 aa6.13□□□□□ -1.43
CDC42BPG-201ENST00000342711 KMT2AQ03164 3969 aa6.1□□□□□ -1.43
CDC42BPG-201ENST00000342711 VPS13BQ7Z7G8 4022 aa6.03□□□□□ -1.44
CDC42BPG-201ENST00000342711 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
CDC42BPG-201ENST00000342711 DNAH7Q8WXX0 4024 aa6.03□□□□□ -1.44
CDC42BPG-201ENST00000342711 APOBP04114 4563 aaKnown RBP6.02□□□□□ -1.45
CDC42BPG-201ENST00000342711 KRTAP19-4Q3LI73 84 aa6□□□□□ -1.45
CDC42BPG-201ENST00000342711 RYR3Q15413 4870 aa5.98□□□□□ -1.45
CDC42BPG-201ENST00000342711 RYR2Q92736 4967 aa5.96□□□□□ -1.46
CDC42BPG-201ENST00000342711 LCE3BQ5TA77 95 aa5.9□□□□□ -1.47
CDC42BPG-201ENST00000342711 LYSTQ99698 3801 aa5.89□□□□□ -1.47
CDC42BPG-201ENST00000342711 FAT3Q8TDW7 4589 aa5.88□□□□□ -1.47
CDC42BPG-201ENST00000342711 HECTD4Q9Y4D8 3996 aa5.87□□□□□ -1.47
CDC42BPG-201ENST00000342711 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
CDC42BPG-201ENST00000342711 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
CDC42BPG-201ENST00000342711 KIAA1109Q2LD37 5005 aa5.84□□□□□ -1.47
CDC42BPG-201ENST00000342711 SPRR2EP22531 72 aa5.81□□□□□ -1.48
CDC42BPG-201ENST00000342711 SPRR2BP35325 72 aa5.81□□□□□ -1.48
CDC42BPG-201ENST00000342711 SPRR2AP35326 72 aa5.81□□□□□ -1.48
CDC42BPG-201ENST00000342711 MT1XP80297 61 aa5.8□□□□□ -1.48
CDC42BPG-201ENST00000342711 MT1GP13640 62 aa5.8□□□□□ -1.48
CDC42BPG-201ENST00000342711 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
CDC42BPG-201ENST00000342711 HSPG2P98160 4391 aa5.75□□□□□ -1.49
CDC42BPG-201ENST00000342711 FRAS1Q86XX4 4008 aa5.75□□□□□ -1.49
CDC42BPG-201ENST00000342711 HERC1Q15751 4861 aa5.75□□□□□ -1.49
CDC42BPG-201ENST00000342711 BIRC6Q9NR09 4857 aa5.71□□□□□ -1.5
CDC42BPG-201ENST00000342711 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
CDC42BPG-201ENST00000342711 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
CDC42BPG-201ENST00000342711 MT1BP07438 61 aa5.68□□□□□ -1.5
CDC42BPG-201ENST00000342711 HYDINQ4G0P3 5121 aa5.65□□□□□ -1.51
CDC42BPG-201ENST00000342711 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
CDC42BPG-201ENST00000342711 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
CDC42BPG-201ENST00000342711 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
CDC42BPG-201ENST00000342711 LCE2CQ5TA81 110 aa5.63□□□□□ -1.51
CDC42BPG-201ENST00000342711 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
CDC42BPG-201ENST00000342711 SPRR2DP22532 72 aa5.62□□□□□ -1.51
CDC42BPG-201ENST00000342711 HERC2O95714 4834 aa5.6□□□□□ -1.51
CDC42BPG-201ENST00000342711 LCE2BO14633 110 aa5.59□□□□□ -1.51
CDC42BPG-201ENST00000342711 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
CDC42BPG-201ENST00000342711 LCE3DQ9BYE3 92 aa5.55□□□□□ -1.52
CDC42BPG-201ENST00000342711 PKD1P98161 4303 aa5.55□□□□□ -1.52
CDC42BPG-201ENST00000342711 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
CDC42BPG-201ENST00000342711 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.53
CDC42BPG-201ENST00000342711 PKHD1P08F94 4074 aa5.46□□□□□ -1.54
CDC42BPG-201ENST00000342711 KMT2CQ8NEZ4 4911 aaKnown RBP5.45□□□□□ -1.54
CDC42BPG-201ENST00000342711 KRTAP19-2Q3LHN2 52 aa5.42□□□□□ -1.54
CDC42BPG-201ENST00000342711 TNXBP22105 4242 aa5.4□□□□□ -1.54
CDC42BPG-201ENST00000342711 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
CDC42BPG-201ENST00000342711 LRP2P98164 4655 aa5.36□□□□□ -1.55
CDC42BPG-201ENST00000342711 KRTAP19-3Q7Z4W3 81 aa5.32□□□□□ -1.56
CDC42BPG-201ENST00000342711 PCLOQ9Y6V0 5065 aa5.32□□□□□ -1.56
CDC42BPG-201ENST00000342711 MT1LQ93083 61 aa5.3□□□□□ -1.56
CDC42BPG-201ENST00000342711 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
CDC42BPG-201ENST00000342711 LPAP08519 4548 aa5.27□□□□□ -1.57
CDC42BPG-201ENST00000342711 MT1EP04732 61 aa5.23□□□□□ -1.57
CDC42BPG-201ENST00000342711 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPG-201ENST00000342711 LCE2DQ5TA82 110 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPG-201ENST00000342711 PRM1P04553 51 aa5.13□□□□□ -1.59
CDC42BPG-201ENST00000342711 EPPK1P58107 5090 aaKnown RBP5.11□□□□□ -1.59
CDC42BPG-201ENST00000342711 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
CDC42BPG-201ENST00000342711 ABCA13Q86UQ4 5058 aa5.09□□□□□ -1.6
CDC42BPG-201ENST00000342711 MT1MQ8N339 61 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms