RNA–Protein interactions for RNA: ENST00000340892.9

TC2N-201, Transcript of tandem C2 domains, nuclear, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TC2N, Length 4,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TC2N-201ENST00000340892 KRTAP10-6P60371 365 aaPredicted RBP7.35□□□□□ -1.23
TC2N-201ENST00000340892 KRTAP15-1Q3LI76 137 aa7.24□□□□□ -1.25
TC2N-201ENST00000340892 DNAH3Q8TD57 4116 aa7.19□□□□□ -1.26
TC2N-201ENST00000340892 HYDINQ4G0P3 5121 aa7.19□□□□□ -1.26
TC2N-201ENST00000340892 MT1HL1P0DM35 61 aa7.18□□□□□ -1.26
TC2N-201ENST00000340892 FRAS1Q86XX4 4008 aa7.17□□□□□ -1.26
TC2N-201ENST00000340892 DNAH11Q96DT5 4516 aa7.17□□□□□ -1.26
TC2N-201ENST00000340892 KMT2CQ8NEZ4 4911 aaKnown RBP7.17□□□□□ -1.26
TC2N-201ENST00000340892 VPS13DQ5THJ4 4388 aa7.13□□□□□ -1.27
TC2N-201ENST00000340892 DNAH1Q9P2D7 4330 aa7.12□□□□□ -1.27
TC2N-201ENST00000340892 DNAH6Q9C0G6 4158 aa7.1□□□□□ -1.27
TC2N-201ENST00000340892 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.27
TC2N-201ENST00000340892 DNAH2Q9P225 4427 aa7.06□□□□□ -1.28
TC2N-201ENST00000340892 FAT1Q14517 4588 aa7.06□□□□□ -1.28
TC2N-201ENST00000340892 PKHD1P08F94 4074 aa7.05□□□□□ -1.28
TC2N-201ENST00000340892 KRTAP3-2Q9BYR7 98 aa7.05□□□□□ -1.28
TC2N-201ENST00000340892 KRTAP3-3Q9BYR6 98 aa7.04□□□□□ -1.28
TC2N-201ENST00000340892 CRCT1Q9UGL9 99 aa7.04□□□□□ -1.28
TC2N-201ENST00000340892 DNAH8Q96JB1 4490 aa6.96□□□□□ -1.29
TC2N-201ENST00000340892 LRP1BQ9NZR2 4599 aa6.96□□□□□ -1.3
TC2N-201ENST00000340892 DNAH5Q8TE73 4624 aa6.92□□□□□ -1.3
TC2N-201ENST00000340892 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
TC2N-201ENST00000340892 KRTAP10-4P60372 401 aaPredicted RBP6.89□□□□□ -1.31
TC2N-201ENST00000340892 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
TC2N-201ENST00000340892 DNAH17Q9UFH2 4485 aa6.89□□□□□ -1.31
TC2N-201ENST00000340892 SACSQ9NZJ4 4579 aa6.88□□□□□ -1.31
TC2N-201ENST00000340892 DYNC2H1Q8NCM8 4307 aaKnown RBP6.84□□□□□ -1.31
TC2N-201ENST00000340892 RYR3Q15413 4870 aa6.83□□□□□ -1.32
TC2N-201ENST00000340892 HECTD4Q9Y4D8 3996 aa6.83□□□□□ -1.32
TC2N-201ENST00000340892 MYCBP2O75592 4640 aa6.82□□□□□ -1.32
TC2N-201ENST00000340892 FAT2Q9NYQ8 4349 aa6.82□□□□□ -1.32
TC2N-201ENST00000340892 FAT3Q8TDW7 4589 aa6.8□□□□□ -1.32
TC2N-201ENST00000340892 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
TC2N-201ENST00000340892 DYNC1H1Q14204 4646 aaKnown RBP6.79□□□□□ -1.32
TC2N-201ENST00000340892 LRP1Q07954 4544 aaKnown RBP6.77□□□□□ -1.33
TC2N-201ENST00000340892 VPS13BQ7Z7G8 4022 aa6.77□□□□□ -1.33
TC2N-201ENST00000340892 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
TC2N-201ENST00000340892 APOBP04114 4563 aaKnown RBP6.72□□□□□ -1.33
TC2N-201ENST00000340892 EPPK1P58107 5090 aaKnown RBP6.71□□□□□ -1.34
TC2N-201ENST00000340892 RYR1P21817 5038 aa6.69□□□□□ -1.34
TC2N-201ENST00000340892 RYR2Q92736 4967 aa6.68□□□□□ -1.34
TC2N-201ENST00000340892 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
TC2N-201ENST00000340892 PKD1P98161 4303 aa6.6□□□□□ -1.35
TC2N-201ENST00000340892 INE1O15225 51 aa6.57□□□□□ -1.36
TC2N-201ENST00000340892 KRTAP17-1Q9BYP8 105 aa6.54□□□□□ -1.36
TC2N-201ENST00000340892 ALMS1Q8TCU4 4167 aa6.48□□□□□ -1.37
TC2N-201ENST00000340892 HSPG2P98160 4391 aa6.47□□□□□ -1.37
TC2N-201ENST00000340892 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
TC2N-201ENST00000340892 KRTAP4-1Q9BYQ7 146 aa6.43□□□□□ -1.38
TC2N-201ENST00000340892 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
TC2N-201ENST00000340892 LRP2P98164 4655 aa6.38□□□□□ -1.39
TC2N-201ENST00000340892 HERC2O95714 4834 aa6.37□□□□□ -1.39
TC2N-201ENST00000340892 MUC2Q02817 5179 aa6.35□□□□□ -1.39
TC2N-201ENST00000340892 ABCA13Q86UQ4 5058 aa6.34□□□□□ -1.39
TC2N-201ENST00000340892 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
TC2N-201ENST00000340892 HERC1Q15751 4861 aa6.31□□□□□ -1.4
TC2N-201ENST00000340892 LPAP08519 4548 aa6.31□□□□□ -1.4
TC2N-201ENST00000340892 RNF213Q63HN8 5207 aa6.25□□□□□ -1.41
TC2N-201ENST00000340892 MT1HP80294 61 aa6.21□□□□□ -1.42
TC2N-201ENST00000340892 MT2AP02795 61 aa6.2□□□□□ -1.42
TC2N-201ENST00000340892 PCLOQ9Y6V0 5065 aa6.19□□□□□ -1.42
TC2N-201ENST00000340892 PKHD1L1Q86WI1 4243 aa6.18□□□□□ -1.42
TC2N-201ENST00000340892 SYNE1Q8NF91 8797 aaKnown RBP6.14□□□□□ -1.43
TC2N-201ENST00000340892 MT1FP04733 61 aa6.1□□□□□ -1.43
TC2N-201ENST00000340892 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
TC2N-201ENST00000340892 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
TC2N-201ENST00000340892 FAT4Q6V0I7 4981 aa6.04□□□□□ -1.44
TC2N-201ENST00000340892 BIRC6Q9NR09 4857 aa6.01□□□□□ -1.45
TC2N-201ENST00000340892 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
TC2N-201ENST00000340892 TNXBP22105 4242 aa5.98□□□□□ -1.45
TC2N-201ENST00000340892 KRTAP19-5Q3LI72 72 aa5.98□□□□□ -1.45
TC2N-201ENST00000340892 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
TC2N-201ENST00000340892 FSIP2Q5CZC0 6907 aa5.82□□□□□ -1.48
TC2N-201ENST00000340892 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
TC2N-201ENST00000340892 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
TC2N-201ENST00000340892 HMCN2Q8NDA2 5059 aa5.69□□□□□ -1.5
TC2N-201ENST00000340892 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
TC2N-201ENST00000340892 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
TC2N-201ENST00000340892 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
TC2N-201ENST00000340892 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
TC2N-201ENST00000340892 MT1XP80297 61 aa5.56□□□□□ -1.52
TC2N-201ENST00000340892 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
TC2N-201ENST00000340892 MT1GP13640 62 aa5.52□□□□□ -1.53
TC2N-201ENST00000340892 MT1BP07438 61 aa5.51□□□□□ -1.53
TC2N-201ENST00000340892 SPRR2EP22531 72 aa5.5□□□□□ -1.53
TC2N-201ENST00000340892 SPRR2BP35325 72 aa5.5□□□□□ -1.53
TC2N-201ENST00000340892 SPRR2AP35326 72 aa5.5□□□□□ -1.53
TC2N-201ENST00000340892 USH2AO75445 5202 aa5.49□□□□□ -1.53
TC2N-201ENST00000340892 KRTAP9-8Q9BYQ0 159 aa5.46□□□□□ -1.54
TC2N-201ENST00000340892 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
TC2N-201ENST00000340892 MUC17Q685J3 4493 aa5.42□□□□□ -1.54
TC2N-201ENST00000340892 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
TC2N-201ENST00000340892 LCE2CQ5TA81 110 aa5.34□□□□□ -1.55
TC2N-201ENST00000340892 KRTAP9-3Q9BYQ3 159 aa5.31□□□□□ -1.56
TC2N-201ENST00000340892 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
TC2N-201ENST00000340892 LCE2BO14633 110 aa5.29□□□□□ -1.56
TC2N-201ENST00000340892 SPRR2DP22532 72 aa5.29□□□□□ -1.56
TC2N-201ENST00000340892 FLGP20930 4061 aaPredicted RBP5.19□□□□□ -1.58
TC2N-201ENST00000340892 LCE3DQ9BYE3 92 aa5.19□□□□□ -1.58
TC2N-201ENST00000340892 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms