RNA–Protein interactions for RNA: ENST00000339600.5

NDUFA4-201, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA4, Length 2,130 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-201ENST00000339600 DNAH10Q8IVF4 4471 aa3.8□□□□□ -1.8
NDUFA4-201ENST00000339600 FRAS1Q86XX4 4008 aa3.79□□□□□ -1.8
NDUFA4-201ENST00000339600 HUWE1Q7Z6Z7 4374 aaKnown RBP3.79□□□□□ -1.8
NDUFA4-201ENST00000339600 PLECQ15149 4684 aaKnown RBP3.78□□□□□ -1.8
NDUFA4-201ENST00000339600 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
NDUFA4-201ENST00000339600 STARD9Q9P2P6 4700 aa3.78□□□□□ -1.81
NDUFA4-201ENST00000339600 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
NDUFA4-201ENST00000339600 KRTAP3-1Q9BYR8 98 aa3.77□□□□□ -1.81
NDUFA4-201ENST00000339600 HECTD4Q9Y4D8 3996 aa3.76□□□□□ -1.81
NDUFA4-201ENST00000339600 KRTAP13-4Q3LI77 160 aa3.75□□□□□ -1.81
NDUFA4-201ENST00000339600 ABCA13Q86UQ4 5058 aa3.74□□□□□ -1.81
NDUFA4-201ENST00000339600 KRTAP10-6P60371 365 aaPredicted RBP3.73□□□□□ -1.81
NDUFA4-201ENST00000339600 S4R3F8 94 aa3.73□□□□□ -1.81
NDUFA4-201ENST00000339600 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
NDUFA4-201ENST00000339600 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
NDUFA4-201ENST00000339600 A0A0D9SG42 100 aa3.71□□□□□ -1.81
NDUFA4-201ENST00000339600 SPACA4Q8TDM5 124 aa3.71□□□□□ -1.81
NDUFA4-201ENST00000339600 KRTAP19-1Q8IUB9 90 aa3.71□□□□□ -1.82
NDUFA4-201ENST00000339600 KRTAP1-5Q9BYS1 174 aa3.71□□□□□ -1.82
NDUFA4-201ENST00000339600 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
NDUFA4-201ENST00000339600 APLNQ9ULZ1 77 aa3.69□□□□□ -1.82
NDUFA4-201ENST00000339600 DNAH8Q96JB1 4490 aa3.68□□□□□ -1.82
NDUFA4-201ENST00000339600 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
NDUFA4-201ENST00000339600 KRTAP4-5Q9BYR2 181 aa3.67□□□□□ -1.82
NDUFA4-201ENST00000339600 DYNC1H1Q14204 4646 aaKnown RBP3.66□□□□□ -1.82
NDUFA4-201ENST00000339600 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.82
NDUFA4-201ENST00000339600 DNAH11Q96DT5 4516 aa3.64□□□□□ -1.83
NDUFA4-201ENST00000339600 A0A1B0GVY2 172 aa3.64□□□□□ -1.83
NDUFA4-201ENST00000339600 KRTAP9-8Q9BYQ0 159 aa3.64□□□□□ -1.83
NDUFA4-201ENST00000339600 DNAH6Q9C0G6 4158 aa3.64□□□□□ -1.83
NDUFA4-201ENST00000339600 KRTAP12-1P59990 96 aa3.63□□□□□ -1.83
NDUFA4-201ENST00000339600 Q6ZRN7 208 aaPredicted RBP3.63□□□□□ -1.83
NDUFA4-201ENST00000339600 HERC1Q15751 4861 aa3.63□□□□□ -1.83
NDUFA4-201ENST00000339600 VPS13DQ5THJ4 4388 aa3.62□□□□□ -1.83
NDUFA4-201ENST00000339600 DNAH17Q9UFH2 4485 aa3.62□□□□□ -1.83
NDUFA4-201ENST00000339600 DMBT1Q9UGM3 2413 aaPredicted RBP3.61□□□□□ -1.83
NDUFA4-201ENST00000339600 UBR4Q5T4S7 5183 aa3.6□□□□□ -1.83
NDUFA4-201ENST00000339600 KMT2AQ03164 3969 aa3.6□□□□□ -1.83
NDUFA4-201ENST00000339600 KRTAP13-2Q52LG2 175 aa3.59□□□□□ -1.83
NDUFA4-201ENST00000339600 HSPG2P98160 4391 aa3.58□□□□□ -1.84
NDUFA4-201ENST00000339600 FAT2Q9NYQ8 4349 aa3.58□□□□□ -1.84
NDUFA4-201ENST00000339600 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
NDUFA4-201ENST00000339600 PKHD1P08F94 4074 aa3.56□□□□□ -1.84
NDUFA4-201ENST00000339600 PKD1P98161 4303 aa3.54□□□□□ -1.84
NDUFA4-201ENST00000339600 DNAH2Q9P225 4427 aa3.54□□□□□ -1.84
NDUFA4-201ENST00000339600 UBE2DNLQ8IWF7 75 aa3.53□□□□□ -1.84
NDUFA4-201ENST00000339600 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
NDUFA4-201ENST00000339600 R4GN34 69 aa3.49□□□□□ -1.85
NDUFA4-201ENST00000339600 APOBP04114 4563 aaKnown RBP3.47□□□□□ -1.85
NDUFA4-201ENST00000339600 KRTAP10-8P60410 259 aa3.47□□□□□ -1.85
NDUFA4-201ENST00000339600 INE1O15225 51 aa3.47□□□□□ -1.85
NDUFA4-201ENST00000339600 LRP1BQ9NZR2 4599 aa3.47□□□□□ -1.85
NDUFA4-201ENST00000339600 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
NDUFA4-201ENST00000339600 M0QZ58 72 aa3.45□□□□□ -1.86
NDUFA4-201ENST00000339600 KRTAP1-4P0C5Y4 121 aa3.45□□□□□ -1.86
NDUFA4-201ENST00000339600 VPS13BQ7Z7G8 4022 aa3.45□□□□□ -1.86
NDUFA4-201ENST00000339600 MYCBP2O75592 4640 aa3.45□□□□□ -1.86
NDUFA4-201ENST00000339600 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
NDUFA4-201ENST00000339600 RPS29P62273 56 aaKnown RBP3.44□□□□□ -1.86
NDUFA4-201ENST00000339600 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
NDUFA4-201ENST00000339600 DNAH5Q8TE73 4624 aa3.43□□□□□ -1.86
NDUFA4-201ENST00000339600 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.86
NDUFA4-201ENST00000339600 C9orf92A6NGG3 77 aa3.38□□□□□ -1.87
NDUFA4-201ENST00000339600 Q5VSD8 79 aa3.37□□□□□ -1.87
NDUFA4-201ENST00000339600 FAT1Q14517 4588 aa3.34□□□□□ -1.87
NDUFA4-201ENST00000339600 RNF213Q63HN8 5207 aa3.33□□□□□ -1.88
NDUFA4-201ENST00000339600 KRTAP10-2P60368 255 aa3.31□□□□□ -1.88
NDUFA4-201ENST00000339600 PKHD1L1Q86WI1 4243 aa3.28□□□□□ -1.88
NDUFA4-201ENST00000339600 KRTAP10-1P60331 282 aa3.25□□□□□ -1.89
NDUFA4-201ENST00000339600 SMR3BP02814 79 aaPredicted RBP3.25□□□□□ -1.89
NDUFA4-201ENST00000339600 FAT3Q8TDW7 4589 aa3.24□□□□□ -1.89
NDUFA4-201ENST00000339600 FAT4Q6V0I7 4981 aa3.21□□□□□ -1.9
NDUFA4-201ENST00000339600 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
NDUFA4-201ENST00000339600 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
NDUFA4-201ENST00000339600 LRP2P98164 4655 aa3.2□□□□□ -1.9
NDUFA4-201ENST00000339600 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
NDUFA4-201ENST00000339600 TNXBP22105 4242 aa3.18□□□□□ -1.9
NDUFA4-201ENST00000339600 MT1HL1P0DM35 61 aa3.17□□□□□ -1.9
NDUFA4-201ENST00000339600 LCE4AQ5TA78 99 aa3.13□□□□□ -1.91
NDUFA4-201ENST00000339600 MUC2Q02817 5179 aa3.12□□□□□ -1.91
NDUFA4-201ENST00000339600 CRCT1Q9UGL9 99 aa3.1□□□□□ -1.91
NDUFA4-201ENST00000339600 TNP1P09430 55 aa3.07□□□□□ -1.92
NDUFA4-201ENST00000339600 KRTAP9-7A8MTY7 169 aa3.02□□□□□ -1.93
NDUFA4-201ENST00000339600 LPAP08519 4548 aa3□□□□□ -1.93
NDUFA4-201ENST00000339600 KRTAP9-3Q9BYQ3 159 aa2.98□□□□□ -1.93
NDUFA4-201ENST00000339600 KRTAP10-10P60014 251 aa2.96□□□□□ -1.94
NDUFA4-201ENST00000339600 KRTAP19-4Q3LI73 84 aa2.93□□□□□ -1.94
NDUFA4-201ENST00000339600 FSIP2Q5CZC0 6907 aa2.92□□□□□ -1.94
NDUFA4-201ENST00000339600 FLGP20930 4061 aaPredicted RBP2.92□□□□□ -1.94
NDUFA4-201ENST00000339600 MUC17Q685J3 4493 aa2.89□□□□□ -1.95
NDUFA4-201ENST00000339600 LCE3AQ5TA76 89 aa2.84□□□□□ -1.96
NDUFA4-201ENST00000339600 KRTAP10-12P60413 245 aa2.83□□□□□ -1.96
NDUFA4-201ENST00000339600 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
NDUFA4-201ENST00000339600 KRTAP8-1Q8IUC2 63 aa2.81□□□□□ -1.96
NDUFA4-201ENST00000339600 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
NDUFA4-201ENST00000339600 MT1HP80294 61 aa2.72□□□□□ -1.97
NDUFA4-201ENST00000339600 KRTAP4-1Q9BYQ7 146 aa2.71□□□□□ -1.98
NDUFA4-201ENST00000339600 KRTAP19-2Q3LHN2 52 aa2.71□□□□□ -1.98
NDUFA4-201ENST00000339600 KRTAP10-5P60370 271 aa2.7□□□□□ -1.98
NDUFA4-201ENST00000339600 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms