RNA–Protein interactions for RNA: ENST00000339600.5

NDUFA4-201, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA4, Length 2,130 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-201ENST00000339600 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
NDUFA4-201ENST00000339600 MYT1Q01538 1121 aa12.77□□□□□ -0.36
NDUFA4-201ENST00000339600 NISCHQ9Y2I1 1504 aa12.34□□□□□ -0.43
NDUFA4-201ENST00000339600 TTBK1Q5TCY1 1321 aaPredicted RBP12.28□□□□□ -0.44
NDUFA4-201ENST00000339600 HRCP23327 699 aa12.23□□□□□ -0.45
NDUFA4-201ENST00000339600 SCAF1Q9H7N4 1312 aaKnown RBP11.93□□□□□ -0.5
NDUFA4-201ENST00000339600 PRKCSHP14314 528 aaPredicted RBP11.86□□□□□ -0.51
NDUFA4-201ENST00000339600 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
NDUFA4-201ENST00000339600 BCL11AQ9H165 835 aa11.69□□□□□ -0.54
NDUFA4-201ENST00000339600 ABCC9O60706 1549 aa11.64□□□□□ -0.55
NDUFA4-201ENST00000339600 APLP2Q06481 763 aa11.63□□□□□ -0.55
NDUFA4-201ENST00000339600 ERICH6Q7L0X2 663 aa11.63□□□□□ -0.55
NDUFA4-201ENST00000339600 AEBP2Q6ZN18 517 aaPredicted RBP11.58□□□□□ -0.56
NDUFA4-201ENST00000339600 FAM9AQ8IZU1 332 aaPredicted RBP11.56□□□□□ -0.56
NDUFA4-201ENST00000339600 PCGF6Q9BYE7 350 aa11.45□□□□□ -0.58
NDUFA4-201ENST00000339600 ACIN1Q9UKV3 1341 aaKnown RBP11.44□□□□□ -0.58
NDUFA4-201ENST00000339600 CENPBP07199 599 aaPredicted RBP11.44□□□□□ -0.58
NDUFA4-201ENST00000339600 DNAJC5BQ9UF47 199 aa11.35□□□□□ -0.59
NDUFA4-201ENST00000339600 CCDC180Q9P1Z9 1646 aa11.33□□□□□ -0.6
NDUFA4-201ENST00000339600 NEUROD1Q13562 356 aa11.32□□□□□ -0.6
NDUFA4-201ENST00000339600 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
NDUFA4-201ENST00000339600 MYO15BQ96JP2 1530 aa11.3□□□□□ -0.6
NDUFA4-201ENST00000339600 ZEB1P37275 1124 aaPredicted RBP11.29□□□□□ -0.6
NDUFA4-201ENST00000339600 SLC24A1O60721 1099 aa11.27□□□□□ -0.61
NDUFA4-201ENST00000339600 ANP32EQ9BTT0 268 aa11.22□□□□□ -0.61
NDUFA4-201ENST00000339600 DCAF1Q9Y4B6 1507 aa11.17□□□□□ -0.62
NDUFA4-201ENST00000339600 CSRNP3Q8WYN3 585 aa11.06□□□□□ -0.64
NDUFA4-201ENST00000339600 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.64
NDUFA4-201ENST00000339600 CHIC1Q5VXU3 224 aa11□□□□□ -0.65
NDUFA4-201ENST00000339600 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
NDUFA4-201ENST00000339600 DAXXQ9UER7 740 aaPredicted RBP10.96□□□□□ -0.65
NDUFA4-201ENST00000339600 UBE2Q2Q8WVN8 375 aa10.87□□□□□ -0.67
NDUFA4-201ENST00000339600 EIF5BO60841 1220 aaKnown RBP10.86□□□□□ -0.67
NDUFA4-201ENST00000339600 DNAJC5Q9H3Z4 198 aa10.83□□□□□ -0.68
NDUFA4-201ENST00000339600 ANO8Q9HCE9 1232 aaPredicted RBP10.82□□□□□ -0.68
NDUFA4-201ENST00000339600 NACADO15069 1562 aa10.82□□□□□ -0.68
NDUFA4-201ENST00000339600 TSHZ2Q9NRE2 1034 aa10.81□□□□□ -0.68
NDUFA4-201ENST00000339600 DIEXFQ68CQ4 756 aaKnown RBP10.79□□□□□ -0.68
NDUFA4-201ENST00000339600 CLSPNQ9HAW4 1339 aa10.76□□□□□ -0.69
NDUFA4-201ENST00000339600 PABPN1Q86U42 306 aaKnown RBP eCLIP10.71□□□□□ -0.69
NDUFA4-201ENST00000339600 BICRAQ9NZM4 1560 aa10.67□□□□□ -0.7
NDUFA4-201ENST00000339600 UNC13AQ9UPW8 1703 aa10.66□□□□□ -0.7
NDUFA4-201ENST00000339600 ERICH6BQ5W0A0 696 aa10.64□□□□□ -0.71
NDUFA4-201ENST00000339600 SUPT16HQ9Y5B9 1047 aaKnown RBP10.64□□□□□ -0.71
NDUFA4-201ENST00000339600 TRIM41Q8WV44 630 aa10.62□□□□□ -0.71
NDUFA4-201ENST00000339600 MYT1LQ9UL68 1186 aa10.62□□□□□ -0.71
NDUFA4-201ENST00000339600 SALL2Q9Y467 1007 aaPredicted RBP10.61□□□□□ -0.71
NDUFA4-201ENST00000339600 SHROOM4Q9ULL8 1493 aa10.6□□□□□ -0.71
NDUFA4-201ENST00000339600 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
NDUFA4-201ENST00000339600 CECR2Q9BXF3 1484 aa10.59□□□□□ -0.71
NDUFA4-201ENST00000339600 PKNOX2Q96KN3 472 aa10.56□□□□□ -0.72
NDUFA4-201ENST00000339600 YTHDC1Q96MU7 727 aaKnown RBP10.54□□□□□ -0.72
NDUFA4-201ENST00000339600 SUPT5HO00267 1087 aaKnown RBP10.54□□□□□ -0.72
NDUFA4-201ENST00000339600 CC2D2AQ9P2K1 1620 aa10.54□□□□□ -0.72
NDUFA4-201ENST00000339600 LOC105371045A0A1W2PR82 267 aa10.51□□□□□ -0.73
NDUFA4-201ENST00000339600 PODXL2Q9NZ53 605 aa10.5□□□□□ -0.73
NDUFA4-201ENST00000339600 CCDC136Q96JN2 1154 aa10.49□□□□□ -0.73
NDUFA4-201ENST00000339600 DEKP35659 375 aaKnown RBP10.47□□□□□ -0.73
NDUFA4-201ENST00000339600 MSH5O43196 834 aa10.46□□□□□ -0.73
NDUFA4-201ENST00000339600 RBM19Q9Y4C8 960 aaKnown RBP10.46□□□□□ -0.74
NDUFA4-201ENST00000339600 ZNF316A6NFI3 1004 aaPredicted RBP10.44□□□□□ -0.74
NDUFA4-201ENST00000339600 MIER1Q8N108 512 aa10.43□□□□□ -0.74
NDUFA4-201ENST00000339600 EIF4G1Q04637 1599 aaKnown RBP10.42□□□□□ -0.74
NDUFA4-201ENST00000339600 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
NDUFA4-201ENST00000339600 FANCIQ9NVI1 1328 aa10.38□□□□□ -0.75
NDUFA4-201ENST00000339600 POTEDQ86YR6 584 aa10.37□□□□□ -0.75
NDUFA4-201ENST00000339600 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
NDUFA4-201ENST00000339600 CUX2O14529 1486 aa10.36□□□□□ -0.75
NDUFA4-201ENST00000339600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.34□□□□□ -0.75
NDUFA4-201ENST00000339600 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
NDUFA4-201ENST00000339600 NEFLP07196 543 aa10.24□□□□□ -0.77
NDUFA4-201ENST00000339600 IL27Q8NEV9 243 aa10.24□□□□□ -0.77
NDUFA4-201ENST00000339600 SENP3Q9H4L4 574 aaPredicted RBP10.19□□□□□ -0.78
NDUFA4-201ENST00000339600 SCRIBQ14160 1630 aa10.16□□□□□ -0.78
NDUFA4-201ENST00000339600 GLIPR1L2Q4G1C9 344 aa10.15□□□□□ -0.78
NDUFA4-201ENST00000339600 ZMYND15Q9H091 742 aa10.15□□□□□ -0.78
NDUFA4-201ENST00000339600 BCANQ96GW7 911 aa10.14□□□□□ -0.79
NDUFA4-201ENST00000339600 RTN4Q9NQC3 1192 aaKnown RBP10.14□□□□□ -0.79
NDUFA4-201ENST00000339600 ZCCHC6Q5VYS8 1495 aaKnown RBP10.13□□□□□ -0.79
NDUFA4-201ENST00000339600 FKBP8Q14318 412 aa10.12□□□□□ -0.79
NDUFA4-201ENST00000339600 C11orf95C9JLR9 678 aaPredicted RBP10.12□□□□□ -0.79
NDUFA4-201ENST00000339600 FGD1P98174 961 aa10.11□□□□□ -0.79
NDUFA4-201ENST00000339600 PDE4CQ08493 712 aa10.11□□□□□ -0.79
NDUFA4-201ENST00000339600 ERCC6Q03468 1493 aa10.09□□□□□ -0.79
NDUFA4-201ENST00000339600 PDIA4P13667 645 aaKnown RBP10.09□□□□□ -0.79
NDUFA4-201ENST00000339600 RSPH6AQ9H0K4 717 aa10.07□□□□□ -0.8
NDUFA4-201ENST00000339600 AAMPQ13685 434 aa10.06□□□□□ -0.8
NDUFA4-201ENST00000339600 VSIG10Q8N0Z9 540 aa10.04□□□□□ -0.8
NDUFA4-201ENST00000339600 NOP58Q9Y2X3 529 aaKnown RBP10.04□□□□□ -0.8
NDUFA4-201ENST00000339600 NBR1Q14596 966 aa10.03□□□□□ -0.8
NDUFA4-201ENST00000339600 WASHC2AQ641Q2 1341 aa10.02□□□□□ -0.81
NDUFA4-201ENST00000339600 WASHC2CQ9Y4E1 1318 aa10.01□□□□□ -0.81
NDUFA4-201ENST00000339600 ITGAEP38570 1179 aa10.01□□□□□ -0.81
NDUFA4-201ENST00000339600 RBM10P98175 930 aaKnown RBP10.01□□□□□ -0.81
NDUFA4-201ENST00000339600 CDK11AQ9UQ88 783 aaPredicted RBP10.01□□□□□ -0.81
NDUFA4-201ENST00000339600 RTL5Q5HYW3 569 aaPredicted RBP10□□□□□ -0.81
NDUFA4-201ENST00000339600 NCAPD3P42695 1498 aa9.99□□□□□ -0.81
NDUFA4-201ENST00000339600 TIMELESSQ9UNS1 1208 aa9.98□□□□□ -0.81
NDUFA4-201ENST00000339600 A0A0U1RQG5 324 aaPredicted RBP9.97□□□□□ -0.81
NDUFA4-201ENST00000339600 NCBP3Q53F19 620 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms