RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 DNAH1Q9P2D7 4330 aa7.49□□□□□ -1.21
CCNY-202ENST00000339497 DNAH10Q8IVF4 4471 aa7.46□□□□□ -1.22
CCNY-202ENST00000339497 FAT1Q14517 4588 aa7.33□□□□□ -1.24
CCNY-202ENST00000339497 STARD9Q9P2P6 4700 aa7.33□□□□□ -1.24
CCNY-202ENST00000339497 VPS13DQ5THJ4 4388 aa7.31□□□□□ -1.24
CCNY-202ENST00000339497 ALMS1Q8TCU4 4167 aa7.28□□□□□ -1.24
CCNY-202ENST00000339497 DYNC1H1Q14204 4646 aaKnown RBP7.25□□□□□ -1.25
CCNY-202ENST00000339497 DNAH17Q9UFH2 4485 aa7.25□□□□□ -1.25
CCNY-202ENST00000339497 PRKDCP78527 4128 aaKnown RBP7.23□□□□□ -1.25
CCNY-202ENST00000339497 LRP1BQ9NZR2 4599 aa7.2□□□□□ -1.26
CCNY-202ENST00000339497 RYR1P21817 5038 aa7.15□□□□□ -1.26
CCNY-202ENST00000339497 DNAH8Q96JB1 4490 aa7.14□□□□□ -1.27
CCNY-202ENST00000339497 DNAH2Q9P225 4427 aa7.13□□□□□ -1.27
CCNY-202ENST00000339497 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
CCNY-202ENST00000339497 KMT2AQ03164 3969 aa7.07□□□□□ -1.28
CCNY-202ENST00000339497 LYSTQ99698 3801 aa7.04□□□□□ -1.28
CCNY-202ENST00000339497 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.28
CCNY-202ENST00000339497 KIAA1109Q2LD37 5005 aa7.02□□□□□ -1.29
CCNY-202ENST00000339497 MYCBP2O75592 4640 aa7□□□□□ -1.29
CCNY-202ENST00000339497 SACSQ9NZJ4 4579 aa6.99□□□□□ -1.29
CCNY-202ENST00000339497 KRTAP4-1Q9BYQ7 146 aa6.98□□□□□ -1.29
CCNY-202ENST00000339497 ANK2Q01484 3957 aa6.97□□□□□ -1.29
CCNY-202ENST00000339497 DYNC2H1Q8NCM8 4307 aaKnown RBP6.93□□□□□ -1.3
CCNY-202ENST00000339497 DNAH3Q8TD57 4116 aa6.93□□□□□ -1.3
CCNY-202ENST00000339497 FAT2Q9NYQ8 4349 aa6.9□□□□□ -1.3
CCNY-202ENST00000339497 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
CCNY-202ENST00000339497 VPS13BQ7Z7G8 4022 aa6.88□□□□□ -1.31
CCNY-202ENST00000339497 APOBP04114 4563 aaKnown RBP6.86□□□□□ -1.31
CCNY-202ENST00000339497 RYR3Q15413 4870 aa6.85□□□□□ -1.31
CCNY-202ENST00000339497 LRP1Q07954 4544 aaKnown RBP6.79□□□□□ -1.32
CCNY-202ENST00000339497 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.33
CCNY-202ENST00000339497 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
CCNY-202ENST00000339497 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
CCNY-202ENST00000339497 KRTAP17-1Q9BYP8 105 aa6.74□□□□□ -1.33
CCNY-202ENST00000339497 DNAH6Q9C0G6 4158 aa6.74□□□□□ -1.33
CCNY-202ENST00000339497 FRAS1Q86XX4 4008 aa6.72□□□□□ -1.33
CCNY-202ENST00000339497 CMYA5Q8N3K9 4069 aa6.72□□□□□ -1.33
CCNY-202ENST00000339497 DNAH7Q8WXX0 4024 aa6.66□□□□□ -1.34
CCNY-202ENST00000339497 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
CCNY-202ENST00000339497 MT1HP80294 61 aa6.63□□□□□ -1.35
CCNY-202ENST00000339497 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
CCNY-202ENST00000339497 HYDINQ4G0P3 5121 aa6.6□□□□□ -1.35
CCNY-202ENST00000339497 MT2AP02795 61 aa6.57□□□□□ -1.36
CCNY-202ENST00000339497 CRCT1Q9UGL9 99 aa6.57□□□□□ -1.36
CCNY-202ENST00000339497 RYR2Q92736 4967 aa6.55□□□□□ -1.36
CCNY-202ENST00000339497 LRP2P98164 4655 aa6.52□□□□□ -1.37
CCNY-202ENST00000339497 HERC2O95714 4834 aa6.5□□□□□ -1.37
CCNY-202ENST00000339497 SPRR2GQ9BYE4 73 aa6.5□□□□□ -1.37
CCNY-202ENST00000339497 PKHD1P08F94 4074 aa6.5□□□□□ -1.37
CCNY-202ENST00000339497 MT1FP04733 61 aa6.48□□□□□ -1.37
CCNY-202ENST00000339497 INE1O15225 51 aa6.36□□□□□ -1.39
CCNY-202ENST00000339497 KMT2CQ8NEZ4 4911 aaKnown RBP6.32□□□□□ -1.4
CCNY-202ENST00000339497 KRTAP8-1Q8IUC2 63 aa6.3□□□□□ -1.4
CCNY-202ENST00000339497 HSPG2P98160 4391 aa6.3□□□□□ -1.4
CCNY-202ENST00000339497 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
CCNY-202ENST00000339497 PKD1P98161 4303 aa6.19□□□□□ -1.42
CCNY-202ENST00000339497 PCLOQ9Y6V0 5065 aa6.18□□□□□ -1.42
CCNY-202ENST00000339497 BIRC6Q9NR09 4857 aa6.18□□□□□ -1.42
CCNY-202ENST00000339497 LPAP08519 4548 aa6.16□□□□□ -1.42
CCNY-202ENST00000339497 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
CCNY-202ENST00000339497 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
CCNY-202ENST00000339497 HERC1Q15751 4861 aa6.08□□□□□ -1.44
CCNY-202ENST00000339497 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
CCNY-202ENST00000339497 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
CCNY-202ENST00000339497 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
CCNY-202ENST00000339497 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
CCNY-202ENST00000339497 EPPK1P58107 5090 aaKnown RBP6.01□□□□□ -1.45
CCNY-202ENST00000339497 MT1BP07438 61 aa5.98□□□□□ -1.45
CCNY-202ENST00000339497 MT1XP80297 61 aa5.98□□□□□ -1.45
CCNY-202ENST00000339497 ABCA13Q86UQ4 5058 aa5.98□□□□□ -1.45
CCNY-202ENST00000339497 LCE3CQ5T5A8 94 aa5.95□□□□□ -1.46
CCNY-202ENST00000339497 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
CCNY-202ENST00000339497 TNXBP22105 4242 aa5.9□□□□□ -1.47
CCNY-202ENST00000339497 KRTAP19-2Q3LHN2 52 aa5.89□□□□□ -1.47
CCNY-202ENST00000339497 MUC17Q685J3 4493 aa5.85□□□□□ -1.47
CCNY-202ENST00000339497 PKHD1L1Q86WI1 4243 aa5.84□□□□□ -1.47
CCNY-202ENST00000339497 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
CCNY-202ENST00000339497 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
CCNY-202ENST00000339497 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
CCNY-202ENST00000339497 FLGP20930 4061 aaPredicted RBP5.72□□□□□ -1.49
CCNY-202ENST00000339497 UBR4Q5T4S7 5183 aa5.71□□□□□ -1.5
CCNY-202ENST00000339497 FSIP2Q5CZC0 6907 aa5.68□□□□□ -1.5
CCNY-202ENST00000339497 LCE2BO14633 110 aa5.64□□□□□ -1.51
CCNY-202ENST00000339497 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
CCNY-202ENST00000339497 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
CCNY-202ENST00000339497 RNF213Q63HN8 5207 aa5.63□□□□□ -1.51
CCNY-202ENST00000339497 SPRR5A0A1B0GTR4 108 aa5.63□□□□□ -1.51
CCNY-202ENST00000339497 MUC2Q02817 5179 aa5.58□□□□□ -1.52
CCNY-202ENST00000339497 MT1GP13640 62 aa5.54□□□□□ -1.52
CCNY-202ENST00000339497 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
CCNY-202ENST00000339497 HMCN2Q8NDA2 5059 aa5.5□□□□□ -1.53
CCNY-202ENST00000339497 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
CCNY-202ENST00000339497 SPRR2EP22531 72 aa5.45□□□□□ -1.54
CCNY-202ENST00000339497 SPRR2BP35325 72 aa5.45□□□□□ -1.54
CCNY-202ENST00000339497 SPRR2AP35326 72 aa5.45□□□□□ -1.54
CCNY-202ENST00000339497 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
CCNY-202ENST00000339497 MT1LQ93083 61 aa5.35□□□□□ -1.55
CCNY-202ENST00000339497 MT1EP04732 61 aa5.33□□□□□ -1.56
CCNY-202ENST00000339497 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
CCNY-202ENST00000339497 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms